| Id Trinity | TRINITY_DN50712_c1_g3_i7 |
|---|---|
| Name Transcript | Ll_transcript_379052 |
| Sequence | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCATGTTATTACTCTCACATTGCACCATTCAAGTTCTGCTCTC GTAGTTGCCAATGGTGTTTGATCAAAATTCGGTTCCCAAAGTGACTCGAACTATAGCCGAAGAGTCACTCATTCGAACCGGGGAGTGTTACTCTTCAAAT TCGGTTCGAACCGGAGAGTTTTATTACACTCCAAATTCGGCTCGAACCGGTTCGGTGCAACTTTACTACCCTGCATCAGTTTCTGATGCTGCTTTGGTTA GAATGGGGTACGGAAATGTGGCTTCTTCCATTGGTGGTACTTGGTGTGTTGGACCTGCAGTTGGGTTTAATTATGGTCATAGTTTTCCCAATCTAATTGC TGGTGGCAAGGGTATTGTTGATGGTTCGGGTGGTGCCATGGCGAGTGGACATGGATATCCGATGAATTTGGTCAATCAGGTTGTGGGAAATGGCTTGGAT AATGCTCTCCAGGGTAAGGAAAAAGTGATTAGCAATAATGCTAGTGATCAGGTTGTTGGTGATATGTCAACAAAGGTTGATCATCAGGTTAGTAATGAAT GTGGAGATGATTCGGTTTCGGTGAAAACATTGAAGTTGATGTGTAGTTATGGTGGGAAGATTTTGCCTAGGCCTAGTGACGGAATGTTGAGATATGTTGG GGGGCAGACTAGAATCATAAGTGTAAAAAGGGATGTGAGCTTCAATGATCTGATGCAAAAGATGGCTGATACTTATGGCCAACTTGCGGTTATCAAGTAT CAGCTTCCCGATGACGAACTTGATGCATTAGTTTCAGTTTCGTGCACTGACGATCTTGAGAATATGATGGAGGAGTGTGAAAGGTTAATTGAGAGCTCTC CTGATGGTTCGGCTAAATTAAGGTTGTTTCTGATTTCTGCTTCAGAACTTGATCCTTTTGCTGTGATTCAGTTTGATGACTTTCTAGATAGTGGCCATAA ATATGTGGAAGCTGTGAATGGATTTACAGATGGAATTAGTGGTAAACTCACAAGAAAAGAAAATTCTACAAGTGCAGCATCGATGCAAAATTCTGACTTC AGTGGTATGGAGACTGTTGATTGGTCAAATGCTGGTCAAGGAGATGTTAGTGGGGCAACTAAGTCTGATGTTTTATCACCTAGGGTAATGTGGCTGTTTC TCATGATACTGCAGTAAATTTGGCTATTTCAGAACCCTGTGCATTTATTTACTCAGATAGTTCTGCGGTTTCATTGGGCATACCTGTGACTAATTCTGGT CCTATGAGCACTTCGCCTTTCCAAAATGAGGTTGAGTTAGAAAACTCTGTACCTGTTATCTTATCGCAGCAGCAATTTGGATTGCATGAACATGGAATGG AAATTCCACTTCCTGCACCTTATTTGCAGCCTTTTGTTGATCCTTGCCAAGAAGTTATGAATCATGCAGATTATGTCAAGCTGCATCCCCAGATGGGCTT CCCAGATGCTCATCTTTTAGGTCAGCCTGGGTCTATCTACTCCCAACATCCGTTTCATGATAACACTGCTGGTTTAGTGTCCCATCAGGCAATCCCTGCA GTGCAAATGATGACCAGGCCATCTTCTCATGTTGGTGTAAGACAAAATATGATTCAACCACAGCCACTGATGCAACCGCAGCAAAATCGTTTGGGCCAAT ATAATGATGAAAATAAATCTGCGGTAACGATTATCCAGCTTCCGACTGAACAAAGCTATAATGCATACCCAGTTCAATTCCCTTATGTCACGGTTGGAGG TAATTATCACTGGGTTCCGGTTCCTCTGCCAGAGCATTTTGTTTTCACTGATGCATTATTACCTCAACAACTGACAATGATCCCTGAGAAAGTCCATAGA GTGGAGGAGTGTTATATGTGCCAGAAAAAACTTCCTCATTCACATTCAGATCCAGTAATTCAGGATCAGCATAATAGTTGTGCAGGTCCTATTGCTGATT CAATTCCAAGTTACAATAGTCTCCCTGTGGAGGAAAATTTAAAAGCTCAAGCAACAAATAGGATTTTGGTAACTGCATCATTGAAGGAAGGCAATGCTGA ACTATTGGTTGGGACCAGACCCATGGTCATTAGCAACTTGGAACCACCGGGTGGAGTACCTTGTTCTGATGCAACCACACTAAGTCGTAATCTTGATCTA GAGCCTGAAGGTGAGAAGAATTTTATACAAAGGTCAGATGGTTTTGATCATTCCAGGAATGCAATTATCCAAGAAGCAACCGGAAGAACAAGTGAAAAAC AGTCACCAAGCGATGGGCACACAGGAACAGCACCGCTGCCTTCTCTTGGTGATGTCATCCACCACCATGTGGTGCCTGTTGAAAACTGCATTAAAGATGA TGTGCTTGTCAATAAAATTGTTACTAATGATATACCTTTAGTTGGTGTCTCCTCTATTGAAGCCTCTCAAGAATCTCCACAAGAATATACTAATGAACTG ACTAGCATTGTTTCAAAAGCAGATGCTGTGGGAAATTTGACCACACAGGACCATCTCAAATCTATTGATGGAAGAGGGGACATCCTCAGCATAGGTAATC CTAAAATTCATGTAAATAATAATAATTTTGATTACAGCACCCAGCATGCTGTAGAGGAGAAAGGGGTGGTTCTGGATAACAAACTTGGCAGGTCTATATT GATTGTTGATGCAAATCAAATTCAGCCGATGGATGTGTTTCCTAATTCTACTATGGAATTTTCAACTAGAATTAATTGCAGGCCAGTTGAATATAATGAG GTTGAACAACCTGCTTGGGGTGTTCCTGTATCAAATCCTCAATTGAAGAGTGGAAACCATCACCAGAATGATGCAATTTCTTCTTCAATTTCACCATCTG TCAGGCTTGGAAATTTGCAGGGTTCTTCAAACTCACTTTTAATCAATCAGGATCCCTTGAATCTTCATGGAACCTACTTTCCACCACCCAGACCTAAAAA AATTGCATTGAAGAAAGAAACCTATTCTCATAAGAATCAGTTTGGTGAGAATCCTGACAACAGCTTGGAACAAAATTTAGAATCTCAGTTGGATGATGGT CTCTACCATACACTCAAACATAATTTAACTTCAGAATTTGCTCAATCTACTAAGGTTTCTCTTTTGAAGGTTCATCAGAAGATCGGCAGAACCAACAGCA TCAAGCCATTGCTGAAGGTGTAGCTGCTTCTGTTCTGCACTCAAGCACTCCTTCAAATCCTGACTTGCATGCCAGAGATGTGTCCCGTCGTGAAGACAAA GAGAATAGAGATGCTCAAAATACTCCAATAGATATACAGCGTAATTATAAAACTCAGGATGTCAAGAGAAAGCTGCCAGAGAAGGCAAATATCAGCTTTC CAGAATCAGATATTGGATCATTGCAGGTTATAAAGAATTCTGACCTTGAAGAGCTTATCAAATTGGGTTCTGGGACATTTGGTACTGTATATCATGGAAA ATGGAGGGGTACTGATATTGCAATTAAGCGGATTAATGATAGGTGTTTTTCTGGAAAGCCTTCAGAGCAAGATCGCATGAGAGATGATTTTTGGAATGAG GCAGTCAAGCTTGCTGACTTGCACCATCCCAATGTGGTCGCTTTCTATGGGATTGTGCTTGATGGTCCAGGAGGATCTGTGGCAACAGTGACTGAGTATA TGGTTAATGGTTCTCTAAGAAATGCCTTGCATAAGAGTCATAGGAATCTTGACAAGCGCAAGCGTCTTATGATTGCAATGGATGTGGCCTTTGGTATGGA GTACCTGCATGGGAAAAACATAGTGCACTTTGACTTGAAGAGTGACAACTTGCTTGTGAATCTTCGAGACCCACACCGCCAAATATGCAAGGAATTGTTA TGGTGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_179332; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_379052
| Blastp | - |
|---|---|
| Blastx | Serine/threonine-protein kinase CTR1 from Arabidopsis with 34.17% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415476.1) |
| Pfam | - |
| Rfam | - |
| GO | - |