| Id Trinity | TRINITY_DN50713_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_378858 |
| Sequence | AAAGTTTTTGGCTCTCTCTCATTCATTCAAAAGTCTCTTTTGACCCTCTCTTTCTTCTTCCAATTCATCCATCTTCATCATAAAAGTATAATATCATATT CTTAATTCTTTTCTTTATATCCAAAAATCTTATCTTTCTCTCATATCTCAAACACCCATCTTCATTTCTCATCATGGGTATCTGTTTTTCCACCACAAAG GTGAGTGGTTCAAACAGCAATAATAACACCACCACCGCCGCCGCCGCCGCCGGAGCAGTAACCACCGCCACCGCAAACCCGAATCGTAAATGGAGTTCAA ACACGCAATCCGATTTGACCACCACGGTGGTGAGCATCCAGAAGCAGCAGCAACCGTTGACCACCGGTCAACGGCAGAAGGTGAAGGAAGAGAGCCATAG CCAGATTCATAGAACGAAAGAGAAAGCTTCTTCGAAGCGCCAAAGTGGACACGTGCCGTGTGGAAAGCGCACAAATTTTGGGTATGAGAAAGACTTTGAT AGAAGATTCTCGCTTGGGAAATTATTGGGACATGGACAATTCGGTTATACCTATGTTGGAATTGATAAAGTAAATGGAGATCGTGTTGCTGTTAAGAGAC TCGAGAAGAACAAGATGGTTTTCCCGATAGCTGTTGAGGATGTTAAACGAGAGGTCAAGATTTTGAAACAACTTACAGGCCATGAAAATGTGGTTCAGTT CTATAATGCTTTTGAGGATGATTCATATGTGTACATAGTTATGGAGTTGTGCGAGGGCGGAGAACTGCTAGATCGTATATTGTCCAAGAAAGACAGCCGG TATACTGAAAAAGATGCAGCAATTGTTGTTAGGCAGATGCTTAAGGTTGCAGCCGAGTGTCATTTACATGGTTTGGTACATAGGGACATGAAACCAGAGA ATTTTCTTTTCAGATCATCCAAAGATGATTCATCTTTAAAGGCTACCGATTTTGGTTTGTCTGATTTCATTAAACCTGGAAGGAGATTTACAGATATTGT CGGCAGTGCTTACTATGTTGCACCTGAAGTGTTAAAACGGAAGTCAGGCCCTGAATCGGATGTATGGAGTATAGGTGTGATCACATACATATTGCTCTCT GGGAGACGCCCATTTTGGGATAAGACCGAGGATGGTATCTTCAAAGAGGTGATAAGGAACAAGCCTGATTTCCGCCGAAAGCCATGGCCAACCATAAGTA ATGCTGCTAAAGATTTTGTGAAAAAAATGTTGGTAAAGGATCCTCGTGCAAGATTAACTGCTGCTCAGGCTCTATCGCATCCATGGGTTAAAGAAGGAGG GGAGGCATTAGAGATTCCTATTGATATATCTGTCCTAGGCAACATGCGACAGTTTGTGAAGTATAGTCGATTGAAACAGTTTGCATTGAGGGCATTGGCT AGTACAATTAATGAAGAAGAGTTGTCTGATCTAAAAGATCAATTTGATGCAATAGATGTGGACAAAAACGGCGTTATCAGCCTTGAAGAGATGAGACAGG CTCTTGCTAAAGATCTCCCTTGGAAGTTGAAAGAATCACGTGTACTTGAGATACTGCAAGCAATAGATAGCAACACAGATGGGCTAGTGGATTTCACCGA GTTTGTAGCAGCTGCGTTGCATGTGCACCAATTGGAGGAACATGATTCTGAGAAGTGGCAAGAACGGTCACAGGCTGCTTTTGAGAAATTTGACTTAGAT AAGGATGGGTATATTACCGCAGATGAACTTAGAGTGCATACGTGCCTGAAAGGCTCGATTGATCCATTGCTTGAGGAAGCCGATATTGACAAAGATGGAA AGATTAGCCTACCAGAATTTCGGAGACTTCTAAGAACTGCAAGCATTGGTTCTCGAAACATGATGAGCCCACACAGCCGTCAGCGGAAGATATAGAGCAG ATATGTTTCAGAGGCGGAGATGATTCAGGATGTAAGAGTGGTGGAGTTCCCTTTAAGGATTATCTCATGTACAGATTGTGCTGGAGCACTTAAGATATCT ATTCTGCAGATTTTGCTTGATCTGACCATTCTATGGGACTCTTCTTTCGGGTGGATACCATTCTATGAAAATCTTAAAGGCTTGCATCCTGCACAGGATT TTTGTGTTAAGCTGGGTCTAGAGGATTATGTGAAAAAGGTGTTGAGTAGAGTGTGTAAGGACTAAGGACCCTGCTATGACTGGCTTCAGTTTCAGTGTAC ATCATTTTAAGTATCAGGGTTTGCCTTGCTTGTGCCATAAATGCATTGTAACCATAAATCAAAATCTCCTAGCAAATGAAAAAAAAATCCTATAAGTTAA TGATATAGTGATGCTGCGTTCTATTTTGTTACCACTTTTTACCTTAATTTTCCGGGCCAATCTCTGTCTGACCCGAGGACACCTTGGCATGCCTCGGTTA CCTTTTGGAAGGCTTACTCCCCATAGAAACTATCTACCTAAAACTGTCACTTGGCCCGTAGGTCTTGACACAAGGTTAGAATTCTGGCTCTGATGGGTCG AGCCCCCGGAAGCGTGAAATTGCACCTAGCTGTACTTACTAATTGTTGCATGGGAGATGATTGGTGCAAAGATAGTTTAGGTGAATCAGTAGCTTGACTA GTTTAACCACTATGATGTTAAACAAAAAAACAACTTATTTTATACGGCACTTCCGAAAGTGCTTTATGCTCCGTTTTAAGTCTATTTACTTGAGAAGTTA AATCTATGTTATTTTAATTGAAAAAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_179340; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_378858
| Blastp | Calcium-dependent protein kinase 28 from Arabidopsis with 74.03% of identity |
|---|---|
| Blastx | Calcium-dependent protein kinase 28 from Arabidopsis with 83.64% of identity |
| Eggnog | calcium-dependent protein kinase(ENOG410XRMJ) |
| Kegg | Link to kegg annotations (AT5G66210) |
| CantataDB | - |
| Mirbase | gma-MIR5368 (MI0018621) |
| Ncbi protein | Link to NCBI protein (XP_019424168.1) |
| Pfam | Protein tyrosine kinase (PF07714.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |