Ll_transcript_378860

• Id Trinity: TRINITY_DN50713_c0_g1_i2
• Name Transcript: Ll_transcript_378860
• Sequence: TTTCCCACAGTCTTAACCTCTCTCTCACTCTCTCTCTGAATAGGAAGGAGAACTTAAAGGAGTCTGAGCTTTGAGTTGGGAAAGCAAGAATGCTTTGGGA GGATTTCTCCAACATATTTGGTGCAACAAAGCTCAGAACTATGTATTGGAATTCATGGCTTCCATTAGACTCACCATGCTTATTGGAGCATGTAGTTTTA CCTGTGGAACTTGTGTTCTTTGTGATCTTATTAGTCCAAATTCTCAGAAAAAGTTTGAACCTGAATAGAAAGCAGAACAAACTCTCAGAACAAGGTATCA CAGAGATGCATAATCCAACTGTGATAAAGTTTGGTTTTGCATACAAAATCAGCATAGTTTGCACCATTTTATTACTAGCTGTTCATGCATCAATGGTAGT GTTATTGAGTCTCAATCATGAGAATCAGTGTAACTCTGAACTTAAGGCTTTTACATCAGAGATAGTTCAAGTGTTATCATGGGGAGTTAGTCTTATAGCA ATGTTCAAGATATCAAAATCAAATGTTTATTTCCATTGGATTCTAAGGGTTTGGTGGATTTTCAGTTTCATTCTGAGTGTGATTAGTACTACTCTTCATG TCAATTTTAGTTTCGCGAATATCGGTCAAATTGGTGTAAGAGAATATGCAGATTTCATTGGTTTGATTGCTTCAACAATCCTTTTGATCATATCATCAAG AGGGAAAACAGGCATTGTGTTAATTGCTGCTACAAATGGCTTATCTAACCCTCTTCTCGGAGAGAAAACGGAGAAAATTTCGGAGTGTGAAAGGGAATCT CCATATGGAAAATCAACTTTTATGCAACTCATTAGCTTCTCCTGGCTCAATCCCTTGTTTGCAGTAGGATACAAGAAGCCTCTTGATCAGAACGACATTC CGGATGTCGATATCAAGGACTCTGCCGAGTTTCTAACGAGTTCCTTTAATGAGAGCCTTAGACAAGTCAAAGAAAAAGACGGTACTACAAACCCGTCTAT CTACAAGGCAATCTATTTGTTAGCTAGGAAGAAAGCAGCGCTGAACGCGCTTTTTGCAGTAATAAGTGCTTCAGCGTCATATGTCGGCCCGTACTTGATT ACTGACTTTGTGGATTTCCTAGGGGAAAAGGAAACTCGTGGCTTGAGGACCGGGTACCTTCTATCGATAGCCTTCTCGTGTGGCAAAATGGTTGAAACAA TATCTCAAAGGCAATGGAATTTCGGAGCGAGGCAGTTAGGCCTTCGCCTCAGAGCTGCATTGACAACACACATATATAAGAAGGGCTTGAACCTGTCGAG TAGATCGCGCCAAAGTCATTCGGGTGGTGAGATAATGAACCTCATGAGTGTAGATGTGCAGAGAGTCACGGATTTCGTTTGGCACGTAAACGTAATTTGG ATGCTGCCTGTGCAAATTTCTTTGGCAGTCTACATTCTGCATACAAATCTCGGATTAGGTTCATTGGCTGCATTAGCTGCTACATTGGCTGTTATGACTT TGAATATACCTCTCACCAAAATACAGAAGAAATATCAATCCAAGATCATGGAGGCTAAGGATGAAAGAATGAAAACCACTTCGGAAATTCTGAGAAACAT GAGGACTTTGAAGCTTCAAGCATGGGATACTCAATTTGGTCAACGGATCGAAACATTGCGGAAAAATGAGTATAATTGGTTAATGAAGTCCTTAAGACAA GCTGCACTTTCTGCTTTTATCTTTTGGGGATCACCTACATTCATTTCTGTGATAACCTTTTGGGCATGTATGTTCATAGGAGTTGAACTTACGGCTGCAA GGGTCTTATCGGCTTTCGCAACGTTCCGAATGTTACAGAGTCCTATATTTAGCCTGCCTGATTTACTCAATGTCATTGCTCAAGGAAAAGTTTCGGTTGA TAGGATTGCTTCTTACCTTAAGGAGGAAGAAATCCAACACGACGTGATTGAATATGTCGCGAAGGATAGAACAGAAAACGACATAGTTATTGATAAAGGG AGATTCAGCTGGGATCCTGATTCAAGAAGTCCAACCATTGATGAGATAGATTTAAAGGTTAAGAGGGGAATGAAGGTGGCAATTTGCGGATCCGTAGGTT CCGGCAAATCTAGTCTTCTCTCGGGCATTTTGGGAGAAATATATAAACAGTCCGGGACAGTGAAGATCAGTGGAACAAAAGCTTATGTTCCGCAGTCGCC GTGGATTCTAACAGGAAACATTCGGGAGAATATTACCTTCGGAAAGGAGTATGATCATGAGAAGTATGAAAAAACAGTGGAAGCTTGTGCATTGAAAAAG GACTTTGAGTTATTCTCCTGTGGTGATCTCACAGGGATAGGAGAAAGAGGTATCAATATGAGTGGAGGACAGAAGCAAAGGATACAAATCGCTCGAGCAG TTTACCAAGACGCCGACATATATCTTCTCGATGACCCTTTCAGTGCTGTTGATGCTCATACCGGCACACACCTCTTTAAGGAGTGCCTAATGGGGATTCT GAAAGAGAAAACCGTGCTTTTCGTCACACACCAAGTTGAGTTTCTTCCAGCAGCAGACCTCATTCTGGTGATGAAAAATGGAAAGATTGCACAAGCCGGA AAATACGAAGAACTTCTAAAGCAAAATATAGGATTTGAAGTTTTAGTAGGTGCTCATAATGTAGCTCTAGAGTCAGTTCTAATGGTTGAAAAATCAACTA GAACAGCTCTAGCCGAAAGGGAATCGAACATCAATTCCAGCTCAAATATTAAACCTGTGCACATACAGCGTGACTCGGCGCAAGATAATCCTCCGGAGAG CAAAGGAAATGAAGGAAAGTTGGTACAAGATGAAGAAAGAGAAAGAGGAAGCATATCAAAAGAAGTTTACTGGTCTTATATGACAACTTACAAAGGTGGA ATTATGGCTCCAATCATAGTTTTGGCACAGACTTCATTCCAAATACTTCAGATTGCAAGTAACTATTGGATGGCTTGGGTTTGTCCGACAACAACCGATG CTAAGCCTTTATTCGAGATGAATTTCATACTACTTATTTATATGGCACTATCTATTGCTAGTGCACTTTGTGTTCTTCTGAGAGCTATGTTGGTAGCAAG TGTTGGACTTGAGACAGCACAGACACTTTTCACAAACTTGTTGCATAATGTGCTCCGAGCACCCATGTCGTTTTTCGATTCAACCCCAACTGGAAGAATC TTGAACAGGGCCTCCTCAGATCAAAGTGTGTTGGACTTGGAAATGGCAACCAAGTTAGGATGGTGTGCCTTCTCCGTAATAGAGATTCTCGGCACTATTG CCGTAATGTCGCAGGTAGCATGGGAAGTATTTGTCATCTTCATTCCAGTAACTGGAATCTGCATATGGTATCAGCGATATTATACGCCGACAGCGAGAGA ACTGGCTCGCTTAGCACAGATACGAATTTCTCCAATTCTCCACCATTTTTCCGAATCTTTAGCAGGAACAGCATCGATAAGAGCCTTTGATCAAGAAAGC CGTTTCGTATACACAAATCTCGGTCTTGTAGATGGCCACTCAAAGCCATGGTTTCATAATGTGTCTGCAATGGAATGGCTTTCTTTCAGATTGAATTTAC TTTCGAATTTTGTTTTCGCCTTCTCGCTGGTTTTGCTAGTGACCCTCCCTGAAGGAATAATCAATCCAAGCATTGCAGGGTTGGCAGTAACATATGGTAT CAATCTGAATGTTTTGCAAGCTTCAGTTATATGGAACATATGCAATGCAGAAAATAAGATGATATCGGTCGAACGAGTTCTTCAGTACTCAAGTATACCA CATGAAGCACCTCTTGTGATCGAAGATTCCAGGCCACCTAGGAACTGGCCTGAAACCGGAACGATTTCTTTAAAAAATTTGGAGGTACGTTATGCTGAGC ATCTTCCGTCTGTGTTGAAAAACATCACTTGTACATTTCCTGGAAGGAAGAAAATCGGTGTGGTAGGACGTACCGGTAGTGGAAAATCGACCCTCATACA GGCCCTTTTCCGGATTGTTGAACCTAGAGAAGGAAGCATTATCATTGACAATGTAGATATATGCAAGATAGGCCTCCATGACTTGAGAACAAGGCTTAGC ATCATTCCACAAGACCCTTCACTATTTGAAGGCACAGTTAGAGGAAACTTGGATCCACTGCAGCAATACTCAGACAATGAAGTTTGGGAGGTAAGTTATA ATCAAACAGTAAAAACTTGGAACATGAAAATACAAGTTAATATATCAAGATAAAGTTGCACTTTTTTTTACATTTTCGATCTCAAGATAGAAAGATTTTT GATGCAGCCGGAAGCACAAAGGATTGGTAAGCGCCAAACCTATAAAGATAAACACAAGTTTTCAAGCACAAACCTGATAGATAAACTCTGGAATTCACCA GAAAGAGAAAATAAATGTTGTTACTGGCTACATCCCAACACGGTTTAAATACTAAAGAAAAGATACTGAAAAGATAATCGCTAAAAATATGCAAATGTTG TTCCTTCCTACATTATTCTTTTCATTTTCAGGCTCTAGATAAATGTCAGCTAGGTGATATAGTAAGAGACAAGAAACAGAAGCTTGAATCACAAGTGGTT GAAAATGGTGAGAATTGGAGTGCAGGCCAAAGACAATTATTTTGTCTAGGAAGAGCCTTACTCAAAAAAAGTAGCATACTAGTGTTAGATGAAGCAACAG CCTCAGTGGACTCTGCTACTGATGGTATCATACAGAAGATCATCAGTCAAGAGTTCCAAGATCGGACCGTCGTCACGATAGCCCATCGGATCCACACCGT TATCGATAGCGATTTGGTTTTGGTGCTTAGTGATGGGAGAATTGCAGAGTATGATGAACCATCAAAGTTACTTGAGAGAGAAGATTCATTCTTCTTTAAG CTTATAAAGGAGTATTCAAGGAGATCACATACTTTCAACACCATGGAATAATTCAAGGACATTATGGAAAGGGATTCTTAGTGGGACAAAAAGTCTCCAA AATATCCCAACATGTTCCAAAAATTGTGTCACTTAGTAATACGCTACTTTTTCAGAAAAGTCGATACAAAATGTCACAGTTTTTGGAACGGAAGATGTGA TCCCTTTAAATAAACCACTAGTGATACAAATAAAGGGATTATTGGCCCTATGTGAGGTAGTATTGTTGTAATACTTATTCCAAAATAAAATTAGATATAG GCTATAGTTTTGAGTATCAAAGAGTAAACTTGGAGACTAGAATTAATGTAAGATTTCATATGTATAATAGATTTAGAACATCAATAAATATTAAGATTGC ATATCTCTTG
• Tissue: pods
• Gene name: LI_gene_179340;
• Additional information: details;

Expression of Ll_transcript_378860

FPKM

• PAB: 0.4
• PNAB: 0.8
• PS1: 0.3
• PS2: 0
• PS3: 0.1
• PW1: 0.1
• PW2: 0.5
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378860

• Blastp: ABC transporter C family member 9 from Arabidopsis with 61.29% of identity
• Blastx: ABC transporter C family member 9 from Arabidopsis with 62.83% of identity
• Eggnog: (ABC) transporter(COG1132)
• Kegg: Link to kegg annotations (AT3G60160)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463470.1)
• Pfam: ABC transporter transmembrane region (PF00664.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;