Ll_transcript_378880

• Id Trinity: TRINITY_DN50713_c0_g1_i20
• Name Transcript: Ll_transcript_378880
• Sequence: ATTAAATTAAAAAATTGAAAAGGTTGGAATAAAATAATGGGAAGTAGTTTAGTTTGTGCCAGAGAGGGGAAAGCTTTGGGTTTTATTTCATTCATTCAAA GGTCTCTTTTGACCATCGCCACCCTCTCCTTCTTCCCTTCTTCCTATTCCTTCATCATCTATTATCTTATTCTTAATTCTTCCCTTTATATCCAAAAATC TTATCTTTCTTTCATATCTCAAATACCCTTCTTCTTTTCCCATCATGGGTATCTGTTTTTCCACCACAAAGGTAAGTGGCTCAAGCAGCAACAATAACAA CCACAACAACAACAACAACAACGCCGGATCAGCCACCACTTCCGCCGCCACAGCAAACCCGATTCGTAAATGGACTTCGAACACGCAATCCGATGTGTCA ACAACGATGGTGAGTATCCAGAAGCAGCAGCAACCGTTGACCGGTGGTCAACGGCAGAAGGTGAAGGAAGAGAGTCAGAATCATAGAACAAAAGACAAGG TTTCTTCGAGGCACGTGCCATGTGGAAAGCGCACAGATTTCGGTTATGAGAAAGATTTTGATCTAAAATTCTCGCTTGGGAAATTGTTGGGGCATGGACA ATTTGGTTACACCTATGTTGGAATTCATAAAGCCAATGGGGATCGTGTTGCCGTTAAGAGACTCGAGAAGAACAAGATGGTTCTCCCTATAGCTGTTGAG GATGTTAAGCGAGAGGTCAAGATATTGAAAGAACTTGCAGGCCATGAAAATGTGGTTCAGTTCTATAATGCTTTTGAGGATGATTCATATGTGTACATAG TTATGGAGTTATGCGAGGGAGGAGAACTGCTAGACCGTATATTGTCCAAGAAGGATAGCCGGTATACTGAAAAAGATGCCGCTGTTGTTGTAAGGCAGAT GCTTAAGGTTGCAGCGGAGTGTCATTTACATGGTTTGGTACATAGGGACATGAAACCAGAGAATTTTCTTTTCAAATCAACTAAAGATGATTCATCTTTA AAGGCTACCGATTTTGGTTTGTCTGATTTCATTAAACCTGGAAAGAGGTTTACAGATATTGTTGGCAGTGCTTACTATGTTGCACCTGAAGTGTTAAAAC GGAAGTCAGGCCCTGAATCAGATGTATGGAGTATTGGTGTGATCACATACATATTGCTTTGTGGGAGACGCCCATTTTGGGATAAGACTGAAGATGGTAT TTTCAAAGAGGTGTTGCGGAACAAACCTGATTTCCGCCGGAAGCCATGGCCAACAATAAGTAATGCCGCTAAAGATTTTGTAAAGAAATTGTTGGTAAAG GACCCTCGTGCAAGATTAACTGCTGCGCAGGCTCTATCGCATCCATGGGTTAAAGAAGGAGGGGAGGCATTAGAGATTCCTATTGATATATCTGTCCTGA ATAACATGCGGCAGTTTGTGAAATATAGTCGATTGAAACAGTTTGCACTGAGGGCATTGGCTAGCACACTTAATGAAGAAGAGTTGTCTGATCTAAAAGA TCAATTTGATGCAATAGATGTGGACAAAAACGGTGCCATTAGCCTTGAAGAGATGAGACAGGCTCTTGCTAAAGATCTCCCTTGGAAGTTGAAAGAATCA CGTGTACTTGAGATACTGCAAGCAATAGATAGCAACACAGATGGGCTAGTGGATTTCACCGAGTTTGTAGCAGCTGCGTTGCATGTGCACCAATTGGAGG AACATGATTCTGAGAAGTGGCAAGAACGGTCACAGGCTGCTTTTGAGAAATTTGACTTAGATAAGGATGGGTATATTACCGCAGATGAACTTAGAGTGCA TACGTGCCTGAAAGGCTCGATTGATCCATTGCTTGAGGAAGCCGATATTGACAAAGATGGAAAGATTAGCCTACCAGAATTTCGGAGACTTCTAAGAACT GCAAGCATTGGTTCTCGAAACATGATGAGCCCACACAGCCGTCAGCGGAAGATATAGAGCAGATATGTTTCAGAGGCGGAGATGATTCAGGATGTAAGAG TGGTGGAGTTCCCTTTAAGGATTATCTCATGTACAGATTGTGCTGGAGCACTTAAGATATCTATTCTGCAGATTTTGCTTGATCTGACCATTCTATGGGA CTCTTCTTTCGGGTGGATACCATTCTATGAAAATCTTAAAGGCTTGCATCCTGCACAGGATTTTTGTGTTAAGCTGGGTCTAGAGGATTATGTGAAAAAG GTGTTGAGTAGAGTGTGTAAGGACTAAGGACCCTGCTATGACTGGCTTCAGTTTCAGTGTACATCATTTTAAGTATCAGGGTTTGCCTTGCTTGTGCCAT AAATGCATTGTAACCATAAATCAAAATCTCCTAGCAAATGAAAAAAAAATCCTATAAGTTAATGATATAGTGATGCTGCGTTCTATTTTGTTACCACTTT TTACCTTAATTTTCCGGGCCAATCTCTGTCTGACCCGAGGACACCTTGGCATGCCTCGGTTACCTTTTGGAAGGCTTACTCCCCATAGAAACTATCTACC TAAAACTGTCACTTGGCCCGTAGGTCTTGACACAAGGTTAGAATTCTGGCTCTGATGGGTCGAGCCCCCGGAAGCGTGAAATTGCACCTAGCTGTACTTA CTAATTGTTGCATGGGAGATGATTGGTGCAAAGATAGTTTAGGTGAATCAGTAGCTTGACTAGTTTAACCACTATGATGTTAAACAAAAAAACAACTTAT TTTATACGGCACTTCCGAAAGTGCTTTATGCTCCGTTTTAAGTCTATTTACTTGAGAAGTTAAATCTATGTTATTTTAATTGAAAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_179340;
• Additional information: details;

Expression of Ll_transcript_378880

FPKM

• PAB: 15.5
• PNAB: 8.9
• PS1: 31.3
• PS2: 9.5
• PS3: 11.5
• PW1: 26.5
• PW2: 24.7
• PW3: 20.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378880

• Blastp: Calcium-dependent protein kinase 28 from Arabidopsis with 75.84% of identity
• Blastx: Calcium-dependent protein kinase 28 from Arabidopsis with 85.27% of identity
• Eggnog: calcium-dependent protein kinase(ENOG410XRMJ)
• Kegg: Link to kegg annotations (AT5G66210)
• CantataDB: -
• Mirbase: gma-MIR5368 (MI0018621)
• Ncbi protein: Link to NCBI protein (XP_019444836.1)
• Pfam: Protein tyrosine kinase (PF07714.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;