Id Trinity | TRINITY_DN50713_c0_g1_i9 |
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Name Transcript | Ll_transcript_378868 |
Sequence | ATTAAATTAAAAAATTGAAAAGGTTGGAATAAAATAATGGGAAGTAGTTTAGTTTGTGCCAGAGAGGGGAAAGCTTTGGGTTTTATTTCATTCATTCAAA GGTCTCTTTTGACCATCGCCACCCTCTCCTTCTTCCCTTCTTCCTATTCCTTCATCATCTATTATCTTATTCTTAATTCTTCCCTTTATATCCAAAAATC TTATCTTTCTTTCATATCTCAAATACCCTTCTTCTTTTCCCATCATGGGTATCTGTTTTTCCACCACAAAGGTAAGTGGCTCAAGCAGCAACAATAACAA CCACAACAACAACAACAACAACGCCGGATCAGCCACCACTTCCGCCGCCACAGCAAACCCGATTCGTAAATGGACTTCGAACACGCAATCCGATGTGTCA ACAACGATGGTGAGTATCCAGAAGCAGCAGCAACCGTTGACCGGTGGTCAACGGCAGAAGGTGAAGGAAGAGAGTCAGAATCATAGAACAAAAGACAAGG TTTCTTCGAGGCACGTGCCATGTGGAAAGCGCACAGATTTCGGTTATGAGAAAGATTTTGATCTAAAATTCTCGCTTGGGAAATTGTTGGGGCATGGACA ATTTGGTTACACCTATGTTGGAATTCATAAAGCCAATGGGGATCGTGTTGCCGTTAAGAGACTCGAGAAGAACAAGATGGTTCTCCCTATAGCTGTTGAG GATGTTAAGCGAGAGGTCAAGATATTGAAAGAACTTGCAGGCCATGAAAATGTGGTTCAGTTCTATAATGCTTTTGAGGATGATTCATATGTGTACATAG TTATGGAGTTATGCGAGGGAGGAGAACTGCTAGACCGTATATTGTCCAAGAAGGATAGCCGGTATACTGAAAAAGATGCCGCTGTTGTTGTAAGGCAGAT GCTTAAGGTTGCAGCGGAGTGTCATTTACATGGTTTGGTACATAGGGACATGAAACCAGAGAATTTTCTTTTCAAATCAACTAAAGATGATTCATCTTTA AAGGCTACCGATTTTGGTTTGTCTGATTTCATTAAACCTGGAAAGAGGTTTACAGATATTGTTGGCAGTGCTTACTATGTTGCACCTGAAGTGTTAAAAC GGAAGTCAGGCCCTGAATCAGATGTATGGAGTATTGGTGTGATCACATACATATTGCTTTGTGGGAGACGCCCATTTTGGGATAAGACTGAAGATGGTAT TTTCAAAGAGGTGTTGCGGAACAAACCTGATTTCCGCCGGAAGCCATGGCCAACAATAAGTAATGCCGCTAAAGATTTTGTAAAGAAATTGTTGGTAAAG GACCCTCGTGCAAGATTAACTGCTGCGCAGGCTCTATCGCATCCATGGGTTAAAGAAGGAGGGGAGGCATTAGAGATTCCTATTGATATATCTGTCCTGA ATAACATGCGGCAGTTTGTGAAATATAGTCGATTGAAACAGTTTGCACTGAGGGCATTGGCTAGCACACTTAATGAAGAAGAGTTGTCTGATCTAAAAGA TCAATTTGATGCAATAGATGTGGACAAAAACGGTGCCATTAGCCTTGAAGAGATGAGACAGGCTCTTGCTAAAGATCTCCCTTGGAAGTTGAAAGAATCA CGTGTACTTGAGATACTGCAAGCAATAGATAGCAACACAGATGGGCTAGTGGATTTCACCGAGTTTGTAGCAGCTGCGTTGCATGTGCACCAATTGGAGG AACATGATTCTGAGAAGTGGCAAGAACGGTCACAGGCTGCTTTTGAGAAATTTGACTTAGATAAGGATGGGTATATTACCGCAGATGAACTTAGAGTGGT TGGTCTCATGCCTTTACTCATTCTCCCCACATATTTCATATGATAAATTCTTGTCTTAAAATTTGAAAGTGGTGCTCTTGTGTTACATTTGTAATGTTTT TCACATAAGGGTGGGTTGTTCATATGATAAAACAGCCTCCTCGTTTACACTTCTCACATCTCACTAGGTGGGAGCCTTGTGAACTAGACATCCTTCTACC AAAAGAAAATGTTTGTCTTTTAATTGAAATACATAAATTCTGCTACTAATGTTATATCCTTGGTGTTTTAGCATACGTGCCTGAAAGGCTCGATTGATCC ATTGCTTGAGGAAGCCGATATTGACAAAGATGGAAAGATTAGCCTACCAGAATTTCGGAGACTTCTAAGAACTGCAAGCATTGGTTCTCGAAACATGATG AGCCCACACAGCCGTCAGCGGAAGATATAGAGCAGATATGTTTCAGAGGCGGAGATGATTCAGGATGTAAGAGTGGTGGAGTTCCCTTTAAGGATTATCT CATGTACAGATTGTGCTGGAGCACTTAAGATATCTATTCTGCAGATTTTGCTTGATCTGACCATTCTATGGGACTCTTCTTTCGGGTGGATACCATTCTA TGAAAATCTTAAAGGCTTGCATCCTGCACAGGATTTTTGTGTTAAGCTGGGTCTAGAGGATTATGTGAAAAAGGTGTTGAGTAGAGTGTGTAAGGACTAA GGACCCTGCTATGACTGGCTTCAGTTTCAGTGTACATCATTTTAAGTATCAGGGTTTGCCTTGCTTGTGCCATAAATGCATTGTAACCATAAATCAAAAT CTCCTAGCAAATGAAAAAAAAATCCTATAAGTTAATGATATAGTGATGCTGCGTTCTATTTTGTTACCACTTTTTACCTTAATTTTCCGGGCCAATCTCT GTCTGACCCGAGGACACCTTGGCATGCCTCGGTTACCTTTTGGAAGGCTTACTCCCCATAGAAACTATCTACCTAAAACTGTCACTTGGCCCGTAGGTCT TGACACAAGGTTAGAATTCTGGCTCTGATGGGTCGAGCCCCCGGAAGCGTGAAATTGCACCTAGCTGTACTTACTAATTGTTGCATGGGAGATGATTGGT GCAAAGATAGTTTAGGTGAATCAGTAGCTTGACTAGTTTAACCACTATGATGTTAAACAAAAAAACAACTTATTTTATACGGCACTTCCGAAAGTGCTTT ATGCTCCGTTTTAAGTCTATTTACTTGAGAAGTTAAATCTATGTTATTTTAATTGAAAAAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_179340; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_378868
Blastp | Calcium-dependent protein kinase 28 from Arabidopsis with 75.68% of identity |
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Blastx | Calcium-dependent protein kinase 28 from Arabidopsis with 86.04% of identity |
Eggnog | calcium-dependent protein kinase(ENOG410XRMJ) |
Kegg | Link to kegg annotations (AT5G66210) |
CantataDB | - |
Mirbase | gma-MIR5368 (MI0018621) |
Ncbi protein | Link to NCBI protein (XP_019444836.1) |
Pfam | Protein tyrosine kinase (PF07714.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |