Id Trinity | TRINITY_DN50716_c1_g4_i3 |
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Name Transcript | Ll_transcript_378476 |
Sequence | CAAAATCATAATATGTTGACATAATGATATAACACCCTCACCAACTCTAAAATTTTGTCCAAACATTTCATTTTCCTTGGCCCAACACCTTCTTCCTACA TTAATGAGTATAGCACTATCAATGATATAATGTTCTATTTCTCTTCTCCTTTCCACACCATGTGCATTGTATTCCTGTTCAACTTGTCCTAACCTTTTTT CTAACTTACTTTCATCACTTTTGGCTTACCAACTTGGAGTCTAGAATATTTTCTCTGAAAGAAGGTTCACATTACTATTTCAGTAATTGTCTGCCAGTGG CTCTAGACCAATCAAGTTTCTTTACATATTGATATTTTGGTATGGTGTTGCTGTTTCCATAAGAGAAGGTCAAGTTTCTAAAGATAAGAGATATTGCTAA GAAGAAGAACATGAAGATTCAGTGTGATGTGTGTGAGAAGGCTCCAGCAACTGTGATTTGTTGTGCTGATGAAGCAGCTTTGTGTGCTAAATGTGATGTT GAAGTCCATGCTGCAAACAGGCTAGCTAGCAAGCACCAGAGGCTTCTCCTTCAATGTCTTTCAAACAAGCTTCCCAGATGTGACATATGCCAGGTACCTT GTATTTCTATGTGTCTATCTTTTACTTTTATGCTACCATAAAATATTATTTCACAAGTTGTTGTGCTTGGATCTAGATGGAAGGTTTGATTATTCCTTTT TTTTGTTTAACTGAAACAAGAAGCAACTAGGAAATCTTTGTGAGTTGTTATAAGTCTAACCTGGGATACTGTTTAAATATCAAGTATCAACCAGAGAGAT GGAAAGCATATAGACCCAAATTTGATCTAAAATTTATTAATAGGGTGTTTAAGAAAACTCCATAACAGATAACTGTAAGGATTGCAGATCTTGGTTCCAT AATCCATATAGTTTATATTGGCTTAATCCTTTGATATTTCTTTATGCTTCTGCAAATCTTCAAAGCCACTAGTTTCTGATGTGTAATAAGTAAAGTTTAT GAAAGAGGTAACTGATCATTAAAAATATCAACCTTTCATTTGCGCCTATTACAGGGCTACTACACAAACCTTATGTGTCTTAGATTATTGCTGCTATTCG AAGTTCAATTGACCTGTTTAAGCATGAATTGTGGAATTCTTGCCCAAGGGATTGTGAATGTCAACAGGAACTTGAGCTGTGTTGAGACTAGAATTACTTT TATAAGTTGGTAGCCTTCTTTCACATGAATGATTTTATTTAGTTTCCATGATTGTTCATTTTGTTCCTTCCTTTCGCCTACAGGATAAAGCAGCTTTCAT ATTTTGTGTTGAAGACAGAGCACTGTTCTGTAAGGATTGTGATGAACCAATTCATTCAGCCGGCAGCCTTTCTTCAAACCACCAGCGCTTCCTCGCTACT GGTATCCGAGTGGCTTTGAGTTCTAAATGCACCGAAGATGATGAAAAAAGTCACTCGGAACCATCTAATTCGAGTGTGCAACTAGCTCATGTGAAAACTC CTCAGCAAGTGCCTAGCTTCACTTCCTCTTGGGCTGTTGATGACATTTTGGAACTAACAGACTTTGAATCACCAGGCAAAGTAAGACAACTTTATTTCAC AATTAGCAGCATCATGCTAATTAAACTTCGCTATAGTACACTCTTGCACTTATTCTGGTTTTTTATTGATATTTGACATTTTCAAGTTATACTTTGAAAC ATAACTGCACAGTTTATTTCATTGAGGGCTATGGTAAGTACTAAGTAGGTTTTCATCCTAACCTTCATAATTTGCTAATAGTCACTTATTTTTATAATAT TAAGAATTATTTTTTCTCTGTTTAGAAAGGATCCCTGGAGTTTGGAGAGCTTGAATGGCTAGCAGATGAGGGTCTTTTCGATGAACAATTTCCTCCGGAA GCTTTAGCGGCAGCCGAAGTTCCTCAGATTCCAGTGATGCATACTAGCAGTGTTACCTCATATAAAGCCTCTAAATCCTCTATGTCCTACAAAAAGCCTA GGATTGAAGTTCTAGATGAAGATGACAATGAGCACTGCACCGTGCCTGATCTTGGTTAAATAAAGCACATGGGCATCTAGACTGTTGCATCAATCTATAG TTTGATGACTTGTATATTCATAGTTCTCTTTAAACATTATAAGGAAATGAAGTACCTTAACAAGCTATGTGGAGTAGTGGAGTCAATAAATATCACATTT TAGGAGTTAGAAATCTGTCAAGACTACAGCACAATCACTCCACACTAATAGGCTCCCACCTCTTTGTCACTAAGGAAAGACTTAAAATTATCTTACAAGT GTATTTCATGACTCACAAACTTTTCTTTTTTCTTTCTTTTCCCTCGAAAATCCAATTCGCAAAATGATCCTAAAAAGCA BLAST |
Tissue | pods |
Gene name | LI_gene_179355; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_378476
Blastp | B-box zinc finger protein 24 from Arabidopsis with 50% of identity |
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Blastx | B-box zinc finger protein 24 from Arabidopsis with 83.61% of identity |
Eggnog | nucleic acid binding transcription factor activity(ENOG410YBMW) |
Kegg | Link to kegg annotations (AT1G06040) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448580.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |