Ll_transcript_379633

• Id Trinity: TRINITY_DN50721_c1_g1_i1
• Name Transcript: Ll_transcript_379633
• Sequence: TCTTGTAAAAGATTCTAAAGCAAGTTGAACTAGATTCATGGATCGAGGGGATCAAATGGCATTATCCGGTTCTGCATCTTACTATATGCAGAGAGGGATG CCTGGTTCTGGAGCGCAACCTGAATTGCATAACTCACCTAATATTCGCCCAATTTCGAATCCCAATTTAGCATTTCAATCAACCATTGGGGGTGGTACTC TAGCATCTACATTGTCAATGGACTCTACAGGAATTCCGTCTCAGTCGGTCAATGTAGGTCCTCCTATGGGGACTCCATCTGGGGACCCTGTCAAAAGGAA GAGAGGAAGGCCTAGGAAATACGGAACTGATGGAACTGTGTCATTGAGATTGACTCCAAGTTCATCACCGGCTAGTCATCCTGGAACCTTGACACAAACA CAAAGCCAAAAACGAGGTCGAGGCCGCCCACTTGGGTCTGGGAAGAAACAGCAGCTGGCTTCTCTTGGTGAATTGATGTCTGGTTCTGCTGGAATGGGTT TCAGTCCTCATATCATCACTGTTGGAGTTGGGGAAGACATTGCAACAAAAATTATGGCATTTTCTCAGCAGGGGCCTAGAGCTATATGCATTTTGTCAGC CACGGGTGCTGTGTCTACAGTGACACTTCGTCAGCCTTCAACTTCAGGTGGCACTGTCACATATGAGGTTTGTAACTTACTCTGTGATAATAACACCTAC GCTTGGATACAGTTACTAGTTCATAAAAATTTTCGTGCATTACATGCATATAATCAAATGGCAACCAATTATAGAGATGATACTATGACTGATTGATAGA ATGGCAATCCTTTTTAGAGATACTATGACTGATTGATTACCAATATAGTTTTTTTAGGAGAGTGTCATATTTTGAAAATTCTATTCATCCAAGGAAGTTA GGGATATACATTATATCTGAAAATTACGCTTTTGTTGTATAGCTTTAAGCTTGTTTTTATGTTTGGGACCCTGGAGCATGTACTGTAGCAATTTTAAATG CAAGATGAGCTTATTTATAAAATACTATACTTCATAAAGGTATTCCGATATATGTATCTTCTATCTACATATCATATACAACCGCAATGGTCATGCACTC ATGTTGCGCAAATCCAATTTAATCCCTGTAGTATACTGTAACAATGTCAATTTCTTGAGTCAGACTGCAATTTTTTACTGAATTCAAAAGATGATGCTGA ATTGCTGACTAAAAGTCTTTTTCGATCATTGTGAGTTAGAAATATCTATAGTTGCTAGCTTCCCCAGTTGCACTGTTGTAGTCACCGATGTTTGCTTTCT TGAGTCAGGGCATTTTTTTTATTCTGTGTGATTGATGAATACAAAAGGTGACACTGACTGCATGTTCTTGGCTATTGTACTTTTAGATTTGAATTCGAAA TATTTATAAATTCTAGGATCCGGGTCACATTCACCGCCTTTCAAGTTTTAAACTTTACTCTGTCTTAGTAATATTGAGTGCCATCCTAGGTAGTCCAGAT TCTTCTGTTTCCTTTTCGGAACCTTCAAAAATATCTTTATAATGGTATTGATAAGTTTATTATGTGTGAAGTTATGCATAATTATTTGTAGCCTTTGGCT TCAATAGGGGCATTTCGAGATATTGTGCCTATCAGGGTCTTACTTGCTTACTGATGGTGGTGGCTCCCGCAATCGAACTGGTGGACTAAGTGTTTCTCTT GCCAGTCCTGATGGCCGTGTCATTGGTGGTGGAATTGGCGGAGTGCTAATTGCTTCAAGTCAAGTTCAGGTGATAATCGGGAGCTTTATGTTGGGTGGAT CAAAGGCAAAGAAAATTAAGAAGGATGCTTCAGAAGGCGCAGAAGTTGCCATGGAGTCAGATCACCTGGCTGTTCATAATCCAGTCGCGATAAGTAGCAT GTCCTCGAATCAAAATTTTATTCCAACCTCATCTCCAAGCCCCTGGCCTGCATCATGCCCATTGGATATGCGCAATTCGCATATTGACATCGATTTAATG CGCGGTTGACAATTGATTGATACATTTCATATTCATGGTCACTCATCTAATTTTATTGTAGTAGTAATGACAAAATGGGAAGTACCAATAGTAGAGTAGA GAAGGCAAACTGACTTTTGGAATATGATAAAATGTTACCTATTCACCCATGATTGATTGACTTTGAGGTTTTTGCTTATGTTTTTTTAGCTGTGAGGGAT TTTAATGTGAAGATTTCTTGTTCCCAACTATATATAGTGTTCAATTTTTAATTTTTTTTGTACTACGAAGGGTATCCCTTAGTTTATGATTAAGGAATTA ATCACTTTTAACGTTTGTGGCTATTCCTCTTGATAAGTATTGCT
• Tissue: pods
• Gene name: LI_gene_179398;
• Additional information: details;

Expression of Ll_transcript_379633

FPKM

• PAB: 4.2
• PNAB: 3.5
• PS1: 1.8
• PS2: 2.6
• PS3: 2.9
• PW1: 4.7
• PW2: 4.4
• PW3: 4.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_379633

• Blastp: AT-hook motif nuclear-localized protein 9 from Arabidopsis with 52.91% of identity
• Blastx: AT-hook motif nuclear-localized protein 9 from Arabidopsis with 52.02% of identity
• Eggnog: AT hook motif domain containing protein, expressed(ENOG410YDXW)
• Kegg: Link to kegg annotations (AT2G45850)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435157.1)
• Pfam: AT hook motif (PF02178.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;