Ll_transcript_379635

• Id Trinity: TRINITY_DN50721_c1_g1_i2
• Name Transcript: Ll_transcript_379635
• Sequence: TTCTCAATCAGTGATATCCAACTATTCAATCTTATCCGCTATCCAATTTCCAAACAAAGAAGAACTGCTTTTTCTGTTCCAACTTTTGTTTGTTTCTGAT ATCCCAGTTTGAATACAGTACACCACATAACATCATTCATCATCATCATCCATTATTCATTTATCACCCAAACATGAGAGAGAAAATTTTGTAAAAGAAT GTGGATAAGGACTTAACCAAACCCAACTTATTATTCATTCAATGTTAATGTTTTTGTTTTGCAATTTTTATCATTCTGTTGTTAATGTTGTTTGCCTCTA GTTTCTGGCTTTCTTTTGTTACTAACTTCACTTTCATAGACAGACATATTTTCTCTCTCTTCTGTCCACTGCTGTCACCACTCTTTAATTTTTCATGAAA CCGTTGAACACTTTTCAGCTCTCACCACTTCCTTACATTTCTTCATCATAGAGGGTGCTTCTTGCTTCTCCACCACACCCTTTTTATCCTCTATCTCTCT CTCTCTAAAAAATAACTAGGTGGTAAACTTTGTGGAATTGAATATTGCGAGTTCGAAGTTTCTTGTAGAAGAGTCTAAAGCAACTTGAAGTACATGCATG GATAGAGGAGACCAGATGACGTTATCCGGTTCTGCATCTTACTATATGCAGAGAGAGATGCCTGGTTCTGGAACACAACCTGAATTGCATAATTCACCTA ATATTCGCCCAATGTCGAATCCCAATGTACCATTTCAATCAACCATTGGGGGTGGTACGTTAGGATCTACATTTCCAATGGACTCTACAGGAATTCAATC TCAGTCGGTCAATGTAGGAGCTCCTTCTGGGGTTCCATCTGGGACGCCTGTCAAAAGGAAGAGAGGAAGGCCTAGGAAATACGGAACTGATGGAACTGTG TCATTGACATTGACTCCAAGTCCAACACTGGCTAGTCATCCTGGAACCTTGACACAAACACAAAGCCAAAAACGAGGTCGAGGCCGCCCACCTGGGTCTG GGAAGAAACAGCAGCTGGCTTCTGTTGGTGAATTGATGTTTGGTTCAGCTGGAATGAGTTTCACTCCTCATATCATCACTGTTGGAGTTGGAGAAGACAT CGCAACAAAAATTATGGCATTTTCTCAGCAGAGCCCTAGAGCTATATGTATTTTGTCTGCCACTGGTACTGTATCTACAGTCACACTTCGTCAGCCATCA ACTTCAGGTGGCACTGTCACACATGAGGGGAATTTCGAGATATTGTGCATATCCGGCTCTTACTTGCTTACTGATGGCGATGGCTCCCGCAATCGAACTG GCGGGCTGAGTGTTTCCCTCGCCAGTCCTGATGGTCGTGTCATTGGTGGAGGAATTCGCGGAGTGCTTATTGCTTCAAGTCAAGTTCAGGTGATAATTGG GAGCTTTATATGGAGTGGATCAAAGGCAAAGAAACTGAGAAAGGAAGCTTCAGAAGGCGCAGAAGTTGCTATGGAGTCAGATCATCAAGCTGTTCATAAT CCAGTTGCATTGAATAGCATGTCCCCGAATCAAAATTTTACTCCAAACTCATCATCAATCCCCTGGCCTGAGTCGCGCCAATTGGATTTGCGAAATTCGC ATATTGACATCGATTTAATGCGTGGGTGACAATTTATTTATACATTTCAGATTCATGGTCACTCATCTAATTTTCTTGTTGTAGTAATGACAGAATGGGA AGTACCAAGAATAGAGTAGAGAAACCTAGCTGACTTTTGGAAATTTGATGAAATGTCACCAATTCACGTATGATTGACTTTGGGGGTTTTACTTATCTTT TCTAGCTGTGAGGAATTTTTAGTTGATTTCTTGTTTGTGCCTAAATATTAGGGCTGAAAACGAACCGAACCGAGTTGAATCTCGAGTTAGTTCCTTTCAT TATAAGCCTTACCAAATCATGTGTCCAACTTGATAATATCGGCATTGGGGTAATGATTTGTGGTAATATTTTTCTACATCTTCAAATTTATTTGTTTACC TTTATTTGATTGATGTCCTCTATGATCCA
• Tissue: pods
• Gene name: LI_gene_179398;
• Additional information: details;

Expression of Ll_transcript_379635

FPKM

• PAB: 41.6
• PNAB: 22.2
• PS1: 51.2
• PS2: 34.7
• PS3: 45.6
• PW1: 28.3
• PW2: 32.1
• PW3: 27.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_379635

• Blastp: AT-hook motif nuclear-localized protein 9 from Arabidopsis with 53.5% of identity
• Blastx: AT-hook motif nuclear-localized protein 9 from Arabidopsis with 53.5% of identity
• Eggnog: AT hook motif domain containing protein, expressed(ENOG410YDXW)
• Kegg: Link to kegg annotations (AT2G45850)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456529.1)
• Pfam: AT hook motif (PF02178.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;