Ll_transcript_379642

• Id Trinity: TRINITY_DN50721_c1_g1_i5
• Name Transcript: Ll_transcript_379642
• Sequence: TAAGGACTGAAGTACCATACCCCACTTACACTATTCAATGTTCATTGTTTTGTTTTGCCATTTTTCATAGTTCTGAACTTGTTTCCCTCTACCTTCTGTT TTTCTTTGTTACTTCACTTTCACATAAACACACTTTCTCTCTCTCTTCTGTCCACTCCTGCCACCAATCTTTAATTCACCATGAAACTGTTGAAACTTTT TCAACTCTTACCACTGTTTTCTATTTCCTCATCATAGAGGGTGCTCACTGATTCTCCACCACACCCTTTTTATCCTCTCTCTCTAAAAAATAACTAGGTG GTAAACTTTGTGGTATTGAATATTGTGAGGTCGAAGTTTCTTGTAAAATATTCTAAAGCAACTTGAAGTAGATGCATGGATCGAGGGGATCAAATGGCGT TATCCGGCTCTGCATCTTACTATATGCAGAGAGGGATGCCTGGTTCTGGAACACAACCTGAATTACATAATTCACCTAATCTTCGTCCCATGCCGAATCC CAATTTACCATTTCAATCAGACATTGGGGGTGGTAGTACTATAGGATCCACATTGCCAATGGAGTCTACCGGAATTTTATCTCAATCGGTCAATGTCGTT GCTCATTCCGGGGCTCCAACTGGGGACCGTGTCAAAAGGAAGAGAGGAAGGCCTAGGAAATATGGAACTGATGGAACCGTGTCACTGACATTGAGTCCAG GTCCAATAACACCGGCTAGTCATCCTGGAACCTTGATACAAACAGAAGGCCAAAAACGCGGTCGAGGGCGTCCGCGTGGGTCAGGGAAGAAACAGCAGCT GGCTTCTCTTGGTGAATTGATGTCTGGTTCAGCAGGAATGGGTTTCACACCTCATATCGTCACCGTTGGAGTTGGAGAAGACATTGCAACAAAAATTATG GCATTTTCTCAGCAGGGCCCTAGAGCGATATGCATTTTGTCAGCCACCGGTGCTGTCTCTACGGTGACACTTCGCCAGTCTTCAACTTCAGGCGGCACTG TCACATATGAGGGGTGTTTCGAGATATTATGTCTATCAGGCTCTTACTTGCTTACTGATGGTGGTGGCTCCCGCAACCGAACCGGTGGACTCAGTGTTTC CCTTGCTGGTCCTGGTGGTTGTGTCATTGGTGGAGGAATTGGCGGAGTGCTTATTGCTTCAAGTCAAGTTCAGGTGATAATCGGGAGCTTTATATGGGGT GGATTAAAGGCGAAGAAAATGAGAAAGGAAGCTTCAGAAGTTGCTATGGTATCAGACCATCAGGCTGTTCATAATCCGGAAGTCGCGATTAATAGCATTT CCTCGAATCATAATTTTCCTCCATCCTCATCTCCAAGCGCCTGGCCTGCATCGCGGCCAGTGGATATGCACAATTCGCATATCGACATCGATTTAATGCG TGGGTAACAATGTATACATTTCGGATTCATGGTCCCTCTTCTAATTTTCTTGTTGTAGTAATGATAGAATGAAGTGCCAACAATAGTGTAGAAGCCAATG TGACTTGGAATTTGATAAAATGTCACCTATTCATCCATGATTGACTTTGGAATTTTTATATCTTTTTTTAGCTGTGATTGAATTTGAACATTAAGCTTAG GTGATTAGTGGAAATACCTTTCTACATCTTCAAACTTAAATGTAATTTATCTTTCTTTCAATTCAAGTTCTCTAGAATACTATCACTTAAGAGAAAAATA TAATGTTGAC
• Tissue: pods
• Gene name: LI_gene_179398;
• Additional information: details;

Expression of Ll_transcript_379642

FPKM

• PAB: 21.2
• PNAB: 23.2
• PS1: 21.9
• PS2: 13.9
• PS3: 16
• PW1: 8.5
• PW2: 11.8
• PW3: 10.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_379642

• Blastp: AT-hook motif nuclear-localized protein 9 from Arabidopsis with 51.66% of identity
• Blastx: AT-hook motif nuclear-localized protein 9 from Arabidopsis with 50.28% of identity
• Eggnog: AT hook motif domain containing protein, expressed(ENOG410YDXW)
• Kegg: Link to kegg annotations (AT2G45850)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460600.1)
• Pfam: AT hook motif (PF02178.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;