Ll_transcript_377924

• Id Trinity: TRINITY_DN50723_c0_g2_i5
• Name Transcript: Ll_transcript_377924
• Sequence: GCGAACCATTGCGATTCATCTTTTCACTTTTCAAATACCCACGCCTTTCCTTCTTCTCTCACCACAACACCGAATACCGACTAAGCAACATAATACTACA CATTCTTCTAACACAAATATCTTCCTTTCTATTCAATTGTTCTTCAACTACATTGAATCAAAGCGTAGTTTTCTTGCTCTTTTTTCTTTCTCATTCTATA ATTCACATAAAGGTTTCGTCGTTATTATCAACTAAAAGTTTGAAATGAATCCTGACAAGTTCACACACAAGACCAATGAGGCTCTTGCTGGGGCTCATGC ACTTGCAATGGATTCTGGTCATGCTCAATTCACTCCTTTACACCTTGCATCTACTCTGATTTCTGATCAAAGTGGCATTTTCTTCCAAGCAATATCCAAT GCTTCTGGTGAAGAATCAGCACATGCTACAACAAGAGTCTTCAACCAAGCCTTGAAGAAGTTACCATGTCAAACTCCTCCACCAGATGATATACCTGCAA GCACAACCTTAATCAAAGTCATTAGAAGGGCACAAGCTGCACAAAAGTCACGTGGTGACACACACTTAGCGGTTGATCAATTGGTTCTTGGAATTCTAGA AGATTCTCAAATTGGAGATTTGTTGAAAGAAGCTGGTGTTGCCACTGCAAGGGTGAAATCAGAGGTTGAGAAGCTTCGTGGGAAAGAAGGGAAGAAGGTT GAGAGTGCTACAGGTGACACAAATTTTCAAGCTCTTAAGACTTATGGAAGAGACTTGGTTGAGCAAGCTGGGAAGCTCGATCCGGTGATCGGGCGCGACG AAGAGATTCGAAGGGTTGTGAGGATTTTATCAAGGAGGACTAAGAACAATCCTGTTCTGATTGGAGAGCCAGGTGTTGGTAAAACAGCTGTGGTGGAAGG TTTGGCACAAAGAATAGTTAGAGGTGATGTTCCTAGCAACCTTGCTGAGGTTAGGTTAATTGCATTGGATATGGGAGCATTGGTTGCTGGTGCAAAGTAT AGGGGAGAGTTTGAAGAGAGGTTGAAGTCAGTTTTGAAAGAAGTAGAGGAGGCTGAGGGAAAAGTTATTCTCTTCATTGATGAAATTCATTTGGTTCTTG GTGCTGGTAGAACTGAAGGATCAATGGATGCTGCTAATCTCTTCAAGCCCATGCTTGCTCGTGGCCAGCTTCGGTGCATTGGTGCCACCACTCTTGAGGA ATATAGGAAGTATGTTGAGAAGGATGCAGCATTTGAAAGAAGGTTCCAACAGGTTTATGTGGCTGAACCTAGTGTGGTTGACACCATTAGTATTCTTCGC GGGCTAAAAGAGCGTTATGAAGGACATCATGGTGTTCGGATTCAAGATCGAGCTCTGGTTGTAGCAGCTCAATTGTCTAGTCGCTACATTACTGGACGCC ATCTTCCGGATAAGGCAATTGATTTAGTTGATGAGGCTTGTGCAAATGTGAGAGTTCAGCTTGATAGCCAGCCTGAGGAAATTGATAACCTTGAAAGAAA GAGGATGCAACTTGAAGTTGAACTTCATGCTTTGGAGAAAGAGAAGGACAAAGCTAGCAAAGCCCGTCTTGTAGAAGTAAGGAAGGAAGTCGATGACTTA AGGGACAAGCTACAACCTTTGATGATGAAGTACAGAAAAGAGAAGGAGAGAGTTGATGAAATTCGAAGGCTTAAGCAGAAGCGTGAGGAGCTCCTCTTCG CTTTACAAGAGGCTGAGAGAAGATATGATCTAGCTAGGGCAGCAGACTTGCGGTATGGCGCGATTCAGGAGGTGGAAACTGCAATCCAACAACTTGAAGG GAGCACTGAGGAGAACTTAATGCTGACAGAAACCGTAGGGCCAGAGCAAATAGCCGAGGTTGTGAGCCGCTGGACTGGTATACCAGTCACAAGGCTCGGC CAAAACGACAAAGAAAGGCTCATTGGACTTGCTGACAGATTGCACACTAGAGTTGTTGGACAAGACCAAGCAGTTAATGCTGTAGCTGAGGCTGTGTTGA GATCAAGAGCTGGATTAGGAAGGCCACAGCAACCTACTGGTTCATTCCTGTTCTTAGGTCCAACTGGTGTTGGTAAGACTGAGCTTGCTAAGGCTCTCGC CGAGCAACTTTTTGATGATGAAAATCAGCTGGTGAGAGTTGACATGTCTGAATACATGGAGCAGCATTCAGTTTCAAGATTGATTGGTGCACCACCAGGG TATGTTGGACATGAGGAAGGTGGTCAATTAACTGAAGCTGTAAGGAGAAGGCCTTATAGTGTGGTACTTTTTGATGAAGTGGAAAAGGCACATACATCAG TGTTCAACACTCTTCTTCAAGTATTAGATGATGGGCGGTTAACGGATGGCCAAGGCCGCACCGTAGACTTTAGAAACACCGTCATCGTCATGACTTCAAA TCTTGGAGCAGAACACCTCCTGACTGGACTTTCAGGAAAATGTACCATGCAAGTTGCGCGTGATAAAGTAATGCAAGAGGTAAGAAGGCATTTTAGGCCA GAATTGTTGAATCGGCTTGATGAAATTGTGGTGTTTGATCCTCTTTCACATGAGCAACTGAGGAAGGTTGCAAGGCTGCAAATGAAGGATGTTGCTAGTC GTCTTGCTGAGAGAGGAATTGCCTTGGCAGTCACAGATGCAGCATTGGACTATATACTAGCTGAGAGCTATGATCCTGTTTATGGTGCTAGACCAATAAG GAGGTGGCTTGAGAGGAAGGTGGTGACAGAGTTATCTAGAATGCTTGTAAGGGAAGAAATTGATGAGAATTCAACAGTTTACATAGATTCTGGGGCTAAG GGGAATGAGTTGGTGTACCATGTAGAAAAGAATGGAGGGGTTGTTAATCCTGCAACAGGCCAGAAGTCAGAGATATTGATTCAGATACCAAATGGACCAA CAAAAACTGATGCTGCTCAAGCAGTCAAGAAGATGAAGATTGAGGAAATTGATGGTGATGAAGAAATGGAAGAGTGAAGAATCTTATGATGTGGACCAGA AAATTCTAAGTTGTTTCTGTTCCTCCTTAAAAGTCCTCTTTTTCTGTCTAATTTTGTAAATAGTCTTCCCAATAGGTGAGGTTGAAAAAGGAAAAAATTG TTGTACTAACAGCTATTTGTCTCATCAACAATTCATTGGATTTGGAAATCCAATAGTTTACATTTATCACTAATTTAAATTGTTAGATTTTTCTAAAATT GATGATTATGATGAATAAATCTTTTAAACTTACTCTTGTAGTAAATTGATCCTCTATAAAATGATAAAAAAGTTTTTAACATGTTAACTTTTCATTTGTT TTTGTGATACTTGTCTTTCTAATTTTTAAATATTTATTCGTCTCTTCGTACCTTCTCAACCTTGTTTAGTA
• Tissue: pods
• Gene name: LI_gene_179410;
• Additional information: details;

Expression of Ll_transcript_377924

FPKM

• PAB: 0.2
• PNAB: 0.8
• PS1: 0.6
• PS2: 3.5
• PS3: 0.2
• PW1: 0.3
• PW2: 0.2
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_377924

• Blastp: Chaperone protein ClpB1 from Arabidopsis with 87.88% of identity
• Blastx: Chaperone protein ClpB1 from Arabidopsis with 87.95% of identity
• Eggnog: ATP-dependent CLP protease ATP-binding subunit(COG0542)
• Kegg: Link to kegg annotations (AT1G74310)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438830.1)
• Pfam: Clp amino terminal domain, pathogenicity island component (PF02861.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;