Ll_transcript_377556

Id TrinityTRINITY_DN50727_c0_g1_i10
Name TranscriptLl_transcript_377556
SequenceGTAACACTAGAGAGAACAACGAAGGAAAATGACATATTTTTGAAGAGGAAAAAAGAAAAAGGGGGGACTTAATGACTAAGTGTGAAATACGTTTGAATGA TTCACAATCCTCATCCATTTAATTTAGTCATTTCCAGTCAACATAGTCCACAATCTCAGTCAAATTCATACAAATCTGAGAAAGCTATAAAACCAAGAAA AAAACACGAAATCAAACCTCTTCACTCTTTTTTCTTCGATTAGGGTTTCCCTCCCAATTTCACCACATTCTCTCTTTCTTCAATGGCCGACCCCATTAAC ATCACCTCTGATTCCCTACCCCAATCTCCCTCTCCCCCCGCCGTCAACGACGATCTCCCTCCGCCACCTCATCCTCCGCAGATCCACCCGTCCAGGCGGA GGGACCGCCGTGACGACTATCGCCGTGATTACCATGACCGCAACTTGTCCCCTAGGGACCACCGCGATAGGGACTTCAAGCGCCACCGCAGCCCTAGTCC TAACTACCGTGACCGCCGCTATTCTCCTCCCCCGCCTTCACGGCGCTCCCCTCCTCAGTTTAAGCGCAACAGGAGGGGAAGCCCCCGCGGCGGCGGTTAT GGCCATGATGACAGATCTGGCTATGATTATGCTGGTGGCTATGAACGAGGAGGTGGAGGAAGGGGCGGAGAGAGGTCTTATGGTGGAAGATTTGGACATC GACCTGCTGGACGATATCAAAATGGAATTTCTGATGTCAATCGCAGTTATGCAGGCTTGCCAGGTGGTGGTGCACAAAGAGAGGGGTTGATGTCCTATAA GCAATTCATCCAGGAGCTTGAGGATGATATTCTGCCATCTGAAGCCGAGTCCAGGTATCAAGAGTACAAATCAGAGTATATTTCTACTCAAAAGCGAGCT TACTTTAATGCTCATAAGAATGAGGAGTGGTTGAAAGATAAATATCACCCGACAAATTTGCTGACAGTAATCGAAAGGAGGAATGAAAATGCCCGAAGGC TGGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACGTTAGACCTAAATCCTGGTTTAAATACCTCTTCATCCAGCAAATCAGGGCATGTAAGCGAGCC ACATTCAGAGGAGGAAACAGATGCTGGTCTTAAACGGAGAAGACATGCAAGGGAACCTAATAAAGATAGTGATTTCCTAGCTGCTCCAAAGGCTCACCCT ATTAGTTCTGAACCTAAACGCATACGACAGGATATTCAACAAGCCCAGGCTGTAGTTCGAAAGCTTGACATGGAGAAGGGAATTGAAGATAATATTTTAT GCACAAGTGATCACACCAAAAATGATGATAAGGCTCGCACTGGATCTGTTGGCCCCACAGTAATTATACGGGGCTTAACATCTGTTAAGGGCTTAGAGGG TGTTGAGCTACTTGACACACTTATTACTTATCTTTGGCGGGTTCATGGTGTAGATTATTATGGCATGATTGAGACAAATGAGGCTAAGGGTTTTAGGCAT GTGAGACCAGAAGGAGCTGGACCTGAAGAAAAAGGTAAATCAGGGTCTGAGTGGGAGAACAAAATTGATTCTTTTTGGCAGAAAAGGTTGAATGGCCAGG ATCCTTTGGAAGTTAGGACTGCTAAGGAGAAGATAGATGCTGCAGCAGTTGAATTCTTGGATGCATATGTGCGAAAAATTAGGGATGAAAAGTATGGGTG GAAGTATGGTTGTGGGGCTAAAGGCTGCACAAAGCTTTTTCATGCTACCGAATTTGTGCACAAACATCTGAAGCTAAAACACCCAGAGCTTGTCACTGAT CTGACTTCAAAATTGAGCGAGGATCTTTATTTCCAAAATTACATGAATGATTCAGATGCACCCGGAGGAACGCCTGTCATGCAGCAACCTCAGAGGGTCA AGTCTCTTAAGCAAAGGTTAGGAGGTCTGGATGGCCGACTGAAAGATGATCGTGGTAGTCGGCGAGATCATGATAGGAGTGACAGAATAAATGGAGATAG GCCTGACAATTCCCCATCTGGTGAGAGGCAGTTGGGAAACCATGATGAAGAAATGTATGATGCTTATGGCGGGCCTGCTGTACCTCAATTTACCTCAGAT ATGCCCCCTCCTCCCCAAGTTTTGATGCCTGTACCTGGGGCTGGGCCATTGGGACCTTTTGTTCCTGCTCCACCGGAAGTTGCAATGCAGATGTTAAGAG AGCAAGGGGGCCCACCTTCATATGATGCTCCTGGTAGGAAGATGCGTTCTGGTCCTCATGTGGGTGGGTCAGCACCAATAATTGCTGTTCCTCCCGCTTT TAGACCAGATCCTCGACGGATGCGCAGGTAAATGTTCTGCAGGACCCTTGATCATATGTTCAATTATGATATCTCCAAAACATGCTCTACCTCTTTTCTG CTCATGCATGTGATCTTTAGACTGTCTGCATTTCAATAACATAAAAGGTGTAGGTAGAAAGAGGAAGGCATAATTTGTTTTCACCGTAACTAATGGTCCT TGTAACCATTGATGTTGGGTCCGTGCACAAAACTTGTATCTATCTCTCTTCAACATGACTGGATCTTAATCCCACTTAACATATGTGTTTGTTATCTGTC ATTAACTTTATTCTGTTGGTGTTGCAGTTATCAAGATCTGGATGCCCCAGATGACGAAGTCACGGTGATAGATTACCGGAGTTTGTAGGTGTCTTGGGTT TCTGTAATTTCAATGAGATCAGCAGTCTGACTGTATTAATGAGATTATGCTCCATTTTCTTTTGTGAATTTGTTTTGAGGATTTTATCTGTTTTATATGG TGTGAATTTGAGAGGAAATTGACTTAGATATTGCACTGGAATTTCATTCTGATTGACTTGCAGATTTCTTGAACCAAAATGTTCCATCTGACTGCATATA AAGACGGTTTTATGTTTGGAGACAGTTTTATTCATCCATTATCACTTTAGACCTACCTTGCAATGCATTTTCTGTTTATAATTTTATAAACCTTATGGGA GAGATAAAGGTTGGAGACCGTACTACGAGTTACAAGTTATTAGATTGAAGTATTTTGGGTTAATCATTAAAGATGGTGGAGGAAATGATGACCTAAACCA TAGGCATTAGGTCGATTGGATGGAATGACAAAATGTTTTAGTTATCATGGGATAGAAATGTATTATTTAAGCTTAATGAGAAGTTTTATTATATAATATA AAATCAATAACACTACATAATAGGGTGAGCATGATCTGATTCTACCTGTTTAGTTGGTATGGTTCAATCATGATTGAGTCTGAATAAGATTTTATTTTAT TGGGGTTTAGGGTTAGGTTCGAATTAAAAAATTAGACCCATACAATATTTAGGGTTGGGTATGATTCAAACATGACCCACCCGACTTATCCATGATTACT CGCTCTTCATGTTTGTATTGTCTATATTCAATTATGTATAAAGTAATGATAACTTTT BLAST
Tissuepods
Gene nameLI_gene_179427; 
Additional informationdetails; 

Expression of Ll_transcript_377556

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_377556
BlastpSerrate RNA effector molecule from Arabidopsis with 58.79% of identity
BlastxSerrate RNA effector molecule from Arabidopsis with 58.15% of identity
EggnogSerrate RNA effector molecule homolog(ENOG410XR8S)
KeggLink to kegg annotations (AT2G27100)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019440877.1)
PfamDomain of unknown function (DUF3546) (PF12066.7)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;