Ll_transcript_377175

• Id Trinity: TRINITY_DN50730_c1_g5_i1
• Name Transcript: Ll_transcript_377175
• Sequence: AGAAACTTGAACAGGAGGTTGAGCTGCGAGTTGATGAAAGAAATGCTCTTCAGCAAGAAATATACTGTCTCAAAGAGGAGCTTAATGATCTAAATAAAAA ATATGAAGCTGTGATAGAGGAGGTCAGGTCAACTAGCTTAGACCCACAGTACTTCGGCTCAGCTGTGAAACAAATGCAAGATGAGAACTCAAAGCTGAAG GAGACGTGTGAGGCTGACAAAGGTGTGAAAGCATCTCTTCTGGCAAAATTGGAGACCATGGAGAAACTTTTGGAGAAAAATTCTGTTTTGGAGAATACTC TTTCAGACTTGAATGCTGAGATGGAGAGTGTGAGAGGAAAGGTAAATGTGTTGGAAGAAACATGCCGATCTCTGCTTGAGGAAAAATCAACTCTTGTTGC TGAGAAGGCCACTTTGTTTTCTCAGTTACAAGCCACAGTTGAAAAGTTGGAGAAGCTCTCAGAAAAGAACAAACTTTTGGAAAATTCACTTTTTGACGTG AATGTCGAACTCGAAGGATTAAGGGTAAAGTCCAAGACCTTAGAAGATACATGCCAGTTACTTGTCGATGAGAAGTCTAGTATCATCTCTGAGAAAGAAA ACTTAGTTTCACAGTTGAACATCACTCAGCAAACACTGAAAGATCTTGAGAAGCAACACAGTGAATTGGAACTACAGCATTTGGAACTAAAAGGAGAAAG GGAGTCTGCACTTTTAAAGATAGAGGAGCTACTGGTCTTATTATATTATGAGAAGGAGGAGCGTTCCAGAGTTATGAAATTGAATGAAGATGACTTGGCT GAGAAGGAATTACGAATTCATGCTCTACAAAAAGATGTGAATTGCCAGAATAGGGAATATGCGGATGAACTTGACAGAGCTGTACATGCTCAAACTGAAA GTTTCATCTTGCAGAAATGTATCCAGGATTTGGAGGAAAAGAACTTATCCCTTCTAGTTGAATGTCAGAGACTTTTAGACGCATCTAAAATGTCTGAGAG AATGATATCTAGATTGGAGATTGAAAATGTTCAAAAGCAGGTTGATTTGAATTCTTTATCTGAGAAAACTAAAATACTAAGAATTGGGCTGCTTCAGGTG TTCAAGACTCTTGACATAAACAGCGAGCATTTGTGTGAGGATAAGCTTGAAGAAGACCAGATGCTTCTGAACCATATACTTGGAAAACTTCAAGACACAA AAAAGTCATTTGTCACAACTTTCAATGAAAACCAGGAGCTGATCGTTGAGAATTCAGTTCTGGTAACATTCCTTGGGCAGTTGAAATTAACGGTGGAAAC TGTTGTGTCAGAAAGAGATGCCCTTGATGAGGAGTTTAGGATCCAGTCTAAGCAGTTCTTGGCATTGCAAATAGAGGCCCAAAAGATACTGGAGAAGAAT CGGGAGTTGAAGTTGACAATAGCAAAGGGAGAAGAGAGAATGGAAATAATGACAACTGAAATACAGAATCTATGCAAACAGCTGTCAGACTTGGAAGAGG GCCACAAAAGTTTACAGGAAGAAAGTTGCAAGACACTTGAAGAGAAGCAGTCCTTGATGAAAAGAGTTGTTGATCTGGGTGAAGAGAAAATTAACTTGGA AGAAGAAATTTCTTTTGTGATCCACGAGACAATAGCTCAATCTAGTATTTCTCTGATTTACCAGAACATCATCTTTGAAAAACTCCTGGAACTTAAAGAG TTGGGTGAAGGTCTCGATAAACTTCGAATGATGAATAATGACCTTGAGGGGAGATTAAAAACAATGGCATGCAAATCAGAAGAAGCAGAGATGGAAAACT CAAATCTTAAGGAGTCATTTGTACAATTGAATATTGAACTAAAGTTAGTTGAATCTGTCAATGATCAATTAAGTTGTCAGATCAGGACTGAAAAGGAATT ACTGTCTAAAAAGGAAAATGAGCTTTTGGAAGCAGCTAAGATGTTTTGTACTTTACAGTCTGAGAAAACAGAATTGCGAAGAATGGTGGAAGATCTGAAG GTTAAGTATGATGAGGCCAGGGTGGTACTTGAAGACAAGGGTAATCAAATTTTAAAATTATACTCAGACAAGGATCATCAAAATGAAGAGCTTCGATGTC TTCGTGAAGTGAATCAGAAGCTGGATTCTGAAATGAGGCAACTACATCAAGAACTTGCAGAAACTAAACTGAGGGAAAAGGAGCTAAGTTATGAGCTGCA TAAGGGAAAAGATGAGATTGAACAATGGGAAACTCAGGCTGCAACACTTTATGGCGAACTGCAAATTTCTGCTGTGAATGAAACATTGTTTGAAGGGAAG CTCTCTGAGCTAGCTGATGTGTGTGAGAATCTTGAACGCCGTAACTACTCTAAAGATATAGAAAGTGAACTGGTGAATGAAAGAGTTACCAAGTTGGAAG GTGAAAATGAAAGACTATGTGGTCATTTAGCTGCTTATGTCCCGGCCGTCAGTGCTTTGAATGATTGTATAACATCTTTGGAGATGCATACTCTTGTACA TGCAAAATCTCATAAGTATGAAGAATCAAAGGTTCAAAATTTGGTGAATCACCAATCCACCAAAAGTGGTCGACAAACAGGTAAAGATCAGACTATTATG GCTCCAGATGCACTCCTGGACTTCCAAGACATGCAGAGAAGGATAAGTGTGATTGAAATGACAGTTAAGCAGATAAATGGAAGTCTCGTACCCAAGGATG AAATACGAGAGGAAACGGAGAACCAGCATACACCTACTAATGAGATTGAGGTTTTGCCAAAAGACATCATGCTTGATCAAATATCTGAATGTTCATCATA TGGGATAAGCAGGAGAGGAACACTTGAGGCTGATGATAAGATGCTTGAGTTATGGGAAACCGCTGATAAGGATGGCATTATTGAATTGACACAAAATAAG GCTCAGAGAGGAGTAACCAACGAGCGGAAGAATAAATATCCTTCATCAGAGTCCTTGATGGAAAAGGAGTTGAGTGTGGACAAATTAGAGATCTCAAGAA GATTGACTCAACCACATGAAGTGGGAAACAAGAGCAAAGTTTTAGAAAGACTTGATTCTGATGCACAAAAGCTAACAAACCTTCAAATAACCATACTGGA TTTGGTGAAGAAGGTGGGAATTATGGGAACTAGCAAAAAAGGAAAAGGTGGCGAGTACAATTCTGTGAAAGATCAGATTGAAGCTGCTCAAGAAACCATC ACAAAGTTGTTTGATGACAACCGAAATTTAAAGAAGAATGTGGAAGATAGTATCATGTCTTTTGACGAGAAGGCTGTGATTGAGTCCGGGGAGGTTGGAA GTGTCAGCAAAAGGAGAGTAATGGAGCATGCACGAAGAGGGTCGGAAAAAATAGGAAGGCTGCAGGTGGAGGTGCAAAGACTGCAGTTTCTGCTTCTGAA ACTGGATGGTAGAAAAGAAAGCAAAGAAAAAACAAACGTTGCTCATCATAGGAGTCCAAGAGTTCTTTTACGAGATTATCTCTATGGTGGGACTAGAACC AACAACCAGAAGAAGAGAGCACACTTTTGTGCATGTGTGGAACCTCTCACCCACAGAGACTGAGTCGCCAAACTTATATTGGCCGATTGTTAGCATAGTT TAGAAGGTGCATGAGACAAGTCAGACATTAGCTTTCTTGTCTGTAAATTCTCCTTTCTATAGATATTTCAAGATTTTAAATATTTTGATGCTGTACATTT TGTGCCTCATTTAATCAGAAGAGGCTAGGATGAACTTCATTTCTTTTCCCCCTTGCAACTCTGAATAATCCCCTGCCTCCTTTTTTTAATCTCTGGTTTA GATGAATGATTCATGTTTCCTATATTGCTTCCCTTAGCATTGTGGTGACATGCACTTGTCTTGATCTTTTGTTATTTTTGCTTGTGTCTTAACAATCCTT TCTTCAGCCTCAAATGCAAGAAATGCATCTCTTGCAATATTTACATTGAACAGGAACCAGCTCACCTGTTTTGGTTTTCTTGAAA
• Tissue: pods
• Gene name: LI_gene_179458;
• Additional information: details;

Expression of Ll_transcript_377175

FPKM

• PAB: 0.9
• PNAB: 15.6
• PS1: 14.7
• PS2: 16.6
• PS3: 20.7
• PW1: 30.2
• PW2: 38.1
• PW3: 41.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_377175

• Blastp: Protein NETWORKED 1D from Arabidopsis with 41.37% of identity
• Blastx: Protein NETWORKED 1D from Arabidopsis with 40.99% of identity
• Eggnog: NA(ENOG410XW3C)
• Kegg: Link to kegg annotations (AT1G03080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427067.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;