| Id Trinity | TRINITY_DN50730_c1_g5_i7 |
|---|---|
| Name Transcript | Ll_transcript_377191 |
| Sequence | AGAAACTTGAACAGGAGGTTGAGCTGCGAGTTGATGAAAGAAATGCTCTTCAGCAAGAAATATACTGTCTCAAAGAGGAGCTTAATGATCTAAATAAAAA ATATGAAGCTGTGATAGAGGAGGTCAGGTCAACTAGCTTAGACCCACAGTACTTCGGCTCAGCTGTGAAACAAATGCAAGATGAGAACTCAAAGCTGAAG GAGACGTGTGAGGCTGACAAAGGTGTGAAAGCATCTCTTCTGGCAAAATTGGAGACCATGGAGAAACTTTTGGAGAAAAATTCTGTTTTGGAGAATACTC TTTCAGACTTGAATGCTGAGATGGAGAGTGTGAGAGGAAAGGTAAATGTGTTGGAAGAAACATGCCGATCTCTGCTTGAGGAAAAATCAACTCTTGTTGC TGAGAAGGCCACTTTGTTTTCTCAGTTACAAGCCACAGTTGAAAAGTTGGAGAAGCTCTCAGAAAAGAACAAACTTTTGGAAAATTCACTTTTTGACGTG AATGTCGAACTCGAAGGATTAAGGGTAAAGTCCAAGACCTTAGAAGATACATGCCAGTTACTTGTCGATGAGAAGTCTAGTATCATCTCTGAGAAAGAAA ACTTAGTTTCACAGTTGAACATCACTCAGCAAACACTGAAAGATCTTGAGAAGCAACACAGTGAATTGGAACTACAGCATTTGGAACTAAAAGGAGAAAG GGAGTCTGCACTTTTAAAGATAGAGGAGCTACTGGTCTTATTATATTATGAGAAGGAGGAGCGTTCCAGAGTTATGAAATTGAATGAAGATGACTTGGCT GAGAAGGAATTACGAATTCATGCTCTACAAAAAGATGTGAATTGCCAGAATAGGGAATATGCGGATGAACTTGACAGAGCTGTACATGCTCAAACTGAAA GTTTCATCTTGCAGAAATGTATCCAGGATTTGGAGGAAAAGAACTTATCCCTTCTAGTTGAATGTCAGAGACTTTTAGACGCATCTAAAATGTCTGAGAG AATGATATCTAGATTGGAGATTGAAAATGTTCAAAAGCAGGTTGATTTGAATTCTTTATCTGAGAAAACTAAAATACTAAGAATTGGGCTGCTTCAGGTG TTCAAGACTCTTGACATAAACAGCGAGCATTTGTGTGAGGATAAGCTTGAAGAAGACCAGATGCTTCTGAACCATATACTTGGAAAACTTCAAGACACAA AAAAGTCATTTGTCACAACTTTCAATGAAAACCAGGAGCTGATCGTTGAGAATTCAGTTCTGGTAACATTCCTTGGGCAGTTGAAATTAACGGTGGAAAC TGTTGTGTCAGAAAGAGATGCCCTTGATGAGGAGTTTAGGATCCAGTCTAAGCAGTTCTTGGCATTGCAAATAGAGGCCCAAAAGATACTGGAGAAGAAT CGGGAGTTGAAGTTGACAATAGCAAAGGGAGAAGAGAGAATGGAAATAATGACAACTGAAATACAGAATCTATGCAAACAGCTGTCAGACTTGGAAGAGG GCCACAAAAGTTTACAGGAAGAAAGTTGCAAGACACTTGAAGAGAAGCAGTCCTTGATGAAAAGAGTTGTTGATCTGGGTGAAGAGAAAATTAACTTGGA AGAAGAAATTTCTTTTGTGATCCACGAGACAATAGCTCAATCTAGTATTTCTCTGATTTACCAGAACATCATCTTTGAAAAACTCCTGGAACTTAAAGAG TTGGGTGAAGGTCTCGATAAACTTCGAATGATGAATAATGACCTTGAGGGGAGATTAAAAACAATGGCATGCAAATCAGAAGAAGCAGAGATGGAAAACT CAAATCTTAAGGAGTCATTTGTACAATTGAATATTGAACTAAAGTTAGTTGAATCTGTCAATGATCAATTAAGTTGTCAGATCAGGACTGAAAAGGAATT ACTGTCTAAAAAGGAAAATGAGCTTTTGGAAGCAGCTAAGATGTTTTGTACTTTACAGTCTGAGAAAACAGAATTGCGAAGAATGGTGGAAGATCTGAAG GTTAAGTATGATGAGGCCAGGGTGGTACTTGAAGACAAGGGTAATCAAATTTTAAAATTATACTCAGACAAGGATCATCAAAATGAAGAGCTTCGATGTC TTCGTGAAGTGAATCAGAAGCTGGATTCTGAAATGAGGCAACTACATCAAGAACTTGCAGAAACTAAACTGAGGGAAAAGGAGCTAAGTTATGAGCTGCA TAAGGGAAAAGATGAGATTGAACAATGGGAAACTCAGGCTGCAACACTTTATGGCGAACTGCAAATTTCTGCTGTGAATGAAACATTGTTTGAAGGGAAG CTCTCTGAGCTAGCTGATGTGTGTGAGAATCTTGAACGCCGTAACTACTCTAAAGATATAGAAAGTGAACTGGTGAATGAAAGAGTTACCAAGTTGGAAG GTGAAAATGAAAGACTATGTGGTCATTTAGCTGCTTATGTCCCGGCCGTCAGTGCTTTGAATGATTGTATAACATCTTTGGAGATGCATACTCTTGTACA TGCAAAATCTCATAAGTATGAAGAATCAAAGGTTCAAAATTTGGTGAATCACCAATCCACCAAAAGTGGTCGACAAACAGGTAAAGATCAGACTATTATG GCTCCAGATGCACTCCTGGACTTCCAAGACATGCAGAGAAGGATAAGTGTGATTGAAATGACAGTTAAGCAGATAAATGGAAGTCTCGTACCCAAGGATG AAATACGAGAGGAAACGGAGAACCAGCATACACCTACTAATGAGATTGAGGTTTTGCCAAAAGACATCATGCTTGATCAAATATCTGAATGTTCATCATA TGGGATAAGCAGGAGAGGAACACTTGAGGCTGATGATAAGATGCTTGAGTTATGGGAAACCGCTGATAAGGATGGCATTATTGAATTGACACAAAATAAG GCTCAGAGAGGAGTAACCAACGAGCGGAAGAATAAATATCCTTCATCAGAGTCCTTGATGGAAAAGGAGTTGAGTGTGGACAAATTAGAGATCTCAAGAA GATTGACTCAACCACATGAAGTGGGAAACAAGAGCAAAGTTTTAGAAAGACTTGATTCTGATGCACAAAAGTTAACAAACCTTCAAATAACCATACAAGA TTTGATGAAGAAGGTGGAAATTACGGAGACGGGCAAGAAGGGAAAATCCATTGAGTACAATTCTGCGAAAGATCAGCTTAAAGCTACTCAGGAAACGATC ACAAAGTTTTTGGATGCCAACCACGAGTTAAAAAAGAATGTGGAAGACAGTAGCATGCCTTCTGGCGAGAGGGGTGTGGTTGAGTCCGGTGAGATTGGAA GTGTCAGCAGGAGGGTAACGGAATATGCACAGAGAGGATCGGAAAAAATAGGACAGCTGCAGTTAGAGGTGCAAAGACTGCAATTTTTGTTTCTGAAACT GAATGGTGGAAAAGAAAGCAAAGGAAAGGCAAAAGTTGCAGACCATCGAAGTCCAAGAGTTCTTTTGCGAGATTATCTCTATGGTGGGACCAGAACCAAC AAGCAAAAGAAGAAGAAAACACCTTGTTTATTCGCATGTGTGAGAACTCTCACCAAGGGAGATTGAGTTTTCACCAAGCATTTATCGGCAGATTGTTAGA ATGGTGTAAAAGGTGCATGAAACAATTCAGACATTAGCTTCCTTGTTTGTAAGTATTCCTTTATATAGATGGTTTAAGACTTTACATATTTTGATGCTGT ACATTTTGTCCCTCATTTACTCAGAAGAGGAGGCTGGGATGGATTTTTCTCCATTAATTTCTTCCAATTCCGAATAACCTCCTTCCTCTTTTTATCTCTA GTTTACATGAGTAATTTATGTTTTTTTTATTGCTTGCTTTAGCATTGTGGTGTCATGCACCTGTCTTCATACTCTGTTTGTGTTTTGGCTGTGTCTTAAG AATCCTTCâBLAST |
| Tissue | pods |
| Gene name | LI_gene_179458; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_377191
| Blastp | Protein NETWORKED 1D from Arabidopsis with 41.12% of identity |
|---|---|
| Blastx | Protein NETWORKED 1D from Arabidopsis with 40.74% of identity |
| Eggnog | NA(ENOG410XW3C) |
| Kegg | Link to kegg annotations (AT1G03080) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427067.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |