Ll_transcript_378110

• Id Trinity: TRINITY_DN50744_c6_g3_i6
• Name Transcript: Ll_transcript_378110
• Sequence: GAACATTCTTGAATGTCTCATCTTAGAGGTGAAAAAAATGGGAAAGAAAGTATGTGTAAGTGGTGGTGGTGGATTTGTAGCATCTTGGCTTATTAAGCTT CTTCTTTCCAAAGGTTACATTGTTCATGCAACTGTAAGACAACCTGGTAATGAGAAATATGAGCACTTGTTGAAATTGGAGAGAGCTTCTGAGAATCTTA AACTCTTCAAAGCAGATCTTTTAAATCATGAATCTCTCTATTCAGCAATTGTTGGATGCAATGCTGTTTTTCATGTTGCTTGCCCTGTCCCCTCAACAAC TGTACCTAATCCTGAGGTAGAAGTCATTGAGCCTGCAGTGAAAGGAACTAAAAATGTACTTGAAGCATGTCTTGAAGCTAAAGTAGAACGAGTTATCTTC GTATCTTCTATAGCTGCTATTGTCATGAACCCAAATTTGTCTAATGATAAAGTGATCGACGAGTCCTGTTGGTCTGATAAAGAGTACTGCAGAAAAACCG AGAACTGGTATTGTTTCTCCAAGGCAGAGGCAGAGGAGCAGGCGCTGGAATTTGCGAAAAGAACCGGGCTTTCTGTAGTAAGCATTTGTCCTTCCCTTAT ATTGGGGCCAATTTTACAGTCAGCTAAAGTTAATGCAAGTAGCTTGGTTCTCCTCAACATTTTAAAAGGTTGTGAGTCGTTGGAGAATAAGCATCGGTGG ATAGTCGATGTGCGAGATCTAGCTGATGCGATACTTTTGGCTTATGAGAACCTTGCGGCAGAAGGAAGATACTTATGCACTTCACATTTTATCAAGACAA AGGATTTGGTGGAAAAATTGAAGAGCATATATCCCAATAACAACTACCCTACAAACTTTATCGAGGTGGATGATTACACAAGGTTGAGCTCAGAGAAGCT GCAAAAGTTGGGTTGGAAATACAGGCCATTAGAGGAAACACTCATTGATTCTGTTGAGAGCTACATGGAGGCTGGTATACTAGAATCAAAATAAATGTGT TTAGTTATTTATCTTTTCCCTTTGTTTGGATGCTTGGCTCCTTGGATAAAATAAATTTGGTTTGTTATTTAGCATCTTCCTATTGGAAGGGATTTGTGTA TGTCTTTCAACTTCTATTTTGTGTTTGAGTTGGATGATCACAATAATTATATAATGTGTGACAAATGAGATCTTTTAAAGTCTAAATTTCCAAACACAAA AAGGCTAGTTGGTTTGGTCTACTGCTGTAAGGCTCTTGCTAGATTTCCAGGATGACCAAAAGGATAAG
• Tissue: pods
• Gene name: LI_gene_179571;
• Additional information: details;

Expression of Ll_transcript_378110

FPKM

• PAB: 0.7
• PNAB: 16
• PS1: 32.3
• PS2: 27
• PS3: 26.9
• PW1: 23.8
• PW2: 18.6
• PW3: 6.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378110

• Blastp: Cinnamoyl-CoA reductase 2 from Arabidopsis with 42.32% of identity
• Blastx: Cinnamoyl-CoA reductase 2 from Arabidopsis with 42.32% of identity
• Eggnog: Nad-dependent epimerase dehydratase(COG0451)
• Kegg: Link to kegg annotations (AT1G80820)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443362.1)
• Pfam: NAD dependent epimerase/dehydratase family (PF01370.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;