Ll_transcript_378122

• Id Trinity: TRINITY_DN50744_c6_g3_i9
• Name Transcript: Ll_transcript_378122
• Sequence: GAACATTCTTGAATGTCTCATCTTAGAGGTGAAAAAAATGGGAAAGAAAGTATGTGTAAGTGGTGGTGGTGGATTTGTAGCATCTTGGCTTATTAAGCTT CTTCTTTCCAAAGGTTACATTGTTCATGCAACTGTAAGACAACCTGGTAATGAGAAATATGAGCACTTGTTGAAATTGGAGAGAGCTTCTGAGAATCTTA AACTCTTCAAAGCAGATCTTTTAAATCATGAATCTCTCTATTCAGCAATTGTTGGATGCAATGCTGTTTTTCATGTTGCTTGCCCTGTCCCCTCAACAAC TGTACCTAATCCTGAGGTAGAAGTCATTGAGCCTGCAGTGAAAGGAACTAAAAATGTACTTGAAGCATGTCTTGAAGCTAAAGTAGAACGAGTTATCTTC GTATCTTCTATAGCTGCTATTGTCATGAACCCAAATTTGTCTAATGATAAAGTGATCGACGAGTCCTGTTGGTCTGATAAAGAGTACTGCAGAAAAACCG AGAACTGGTATTGTTTCTCCAAGGCAGAGGCAGAGGAGCAGGCGCTGGAATTTGCGAAAAGAACCGGGCTTTCTGTAGTAAGCATTTGTCCTTCCCTTAT ATTGGGGCCAATTTTACAGTCAGCTAAAGTTAATGCAAGTAGCTTGGTTCTCCTCAACATTTTAAAAGGTGCCCACTTATCCTTTATGAAATTATTGTCG TTACGAAACACCATTTTACCAACTATTCGATGCTAATTAAAATGCCGTGTTGTCTTAGACGACAATGACATCCCTTTCCATAGATAACATCTTTGATCAT GTTAAAGTGATGCAAAATATTTGGTGCCCGGAAAAGATTCAGAGTTCGGCAATAGCAATTTATCGTTGGAGATAAATGAGATGAATAGTTGACAATACGG TAATTTGGAATCGAGAAAAACTAATTCTAGATTATTGGAAACGATATTTGAAATCATTTTTTTGGTTTCTTGCCATAATCAACAATCTTCACATTGCAAT TCATCTAGTTCTATTATCACTCAACATTTATATGATAATGGTGTCATGTCTGGTTATCATGAAACACAATTATACTCTTAGAAGAGCTGATTTTTATGTA TCATTTGCTTCACTTCCGAATGACTTGAAATGATGGCATGCATTCTTTTACTTATTTTTAAGGGTTAAATACTAAAATACTGCCCGAAAACTAAAAAAAG TCATGTCATTTGGCTTGTCTTTCTTTGTCTTGTTTTGTCTGAAACTGAAGGTTGTGAGTCGTTGGAGAATAAGCATCGGTGGATAGTCGATGTGCGAGAT CTAGCTGATGCGATACTTTTGGCTTATGAGAACCTTGCGGCAGAAGGAAGATACTTATGCACTTCACATTTTATCAAGACAAAGGATTTGGTGGAAAAAT TGAAGAGCATATATCCCAATAACAACTACCCTACAAACTTTATCGAGGTGGATGATTACACAAGGTTGAGCTCAGAGAAGCTGCAAAAGTTGGGTTGGAA ATACAGGCCATTAGAGGAAACACTCATTGATTCTGTTGAGAGCTACATGGAGGCTGGTATACTAGAATCAAAATAAATGTGTTTAGTTATTTATCTTTTC CCTTTGTTTGGATGCTTGGCTCCTTGGATAAAATAAATTTGGTTTGTTATTTAGCATCTTCCTATTGGAAGGGATTTGTGTATGTCTTTCAACTTCTATT TTGTGTTTGAGTTGGATGATCACAATAATTATATAATGTGTGACAAATGAGATCTTTTAAAGTCTAAATTTCCAAACACAAAAAGGCTAGTTGGTTTGGT CTACTGCTGTAAGGCTCTTGCTAGATTTCCAGGATGACCAAAAGGATAAG
• Tissue: pods
• Gene name: LI_gene_179571;
• Additional information: details;

Expression of Ll_transcript_378122

FPKM

• PAB: 0
• PNAB: 0
• PS1: 1
• PS2: 3.7
• PS3: 1.5
• PW1: 0.1
• PW2: 0
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378122

• Blastp: Cinnamoyl-CoA reductase 2 from Arabidopsis with 47.51% of identity
• Blastx: Cinnamoyl-CoA reductase 2 from Arabidopsis with 47.51% of identity
• Eggnog: Nad-dependent epimerase dehydratase(COG0451)
• Kegg: Link to kegg annotations (AT1G80820)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443362.1)
• Pfam: NAD dependent epimerase/dehydratase family (PF01370.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;