Ll_transcript_378117

• Id Trinity: TRINITY_DN50744_c6_g6_i5
• Name Transcript: Ll_transcript_378117
• Sequence: TCTATATAACCAAAGACACCTTTGTTCATTTCCCATTCCATTTTCAGCCGTGCGATCTTTCCGGTGAAATATTTCAATTCCATTTTATTTTATTTTCGGG TTATAATTTGTAGATAGGGAGAGAAGATGTTGGGAATATTCAGCAGCTCGATCGTATCGCCACCGGACGAGCTGGTTGCAGCCGGCAGCAGAACACCGTC GCCAAAGACAAAGGCGGCGGCGCTGCTGAAGCGGTTTGTTGAGAGCAAGTCATCCTCCGTGTCAGTGCAGGTTGGGGAAAATGCTCAGTTTGCATATACT CACCACAACGAGTCACCGTGGCAACCAAGGTCATTTGCTGTTAAGGATGAGGTTTTCTGTTTGTTTGAGGGAGCTCTTGACAACTTGGGAAGCTTGAGGC AACAATATGGACTAGCCAAGTCTACGAATGAAGTACTTTTGGTCATCGAGGCTTACAAAACTTTACGCGATAGAGCTCCATACCCTGCTAATCATGTTGT TGGCCATCTCAGTGGGAGCTTTGCTTTCATAGTTTTTGACAAGTCCACTTCTACCCTCTTTGTGGCTGCTGTAAGTAATTCACGGCATTGTCAATTTTAT TGATCGACGCCACGATCTTTAGTTAATTAGTTACCTTTACTCAGAACATTGTGCATGTGTTAATTATGACAGGATCAAGCTGGTAAGGTTCCTCTTTATT GGGGAATAACGGCGGATGGAAACATAGCGTTTTCTGATGATGCAGAACTGCTTAAAGGGTCATGTGGCAAGTCACTTGCTTCTTTCCCTCAAGGTTGGTT TATTTATGTGCTTATGTGTGTATGTCAAATGCATCACAATTACCCTTTAAATTTCCAACCACGATTGAGACCACAACGCTGTAGTTTTGATTGTCTCCTC ACTCGAGTCGTGTCTGTAATTGTCGTCGCATTTTCCTGCATCTGCAATTATGATAAACACAACATTTAATTATTGTAACTGCACAAATATGCAAATAGAA AAGGGAATAAAATGAACTCTTTGGGTAGAATATGAATTCTTTACCAACTACAATGACATTGTCTCAGTTCTTTGTCCAGTTTCCTCAATTTTGTAAGATT TCCATCTAATTTTTTGGCATCATTGCTCTCTAAACTGTACAGGATGTTTCTACTCCACAACAGTTGGAGGATTGAGATGCTATGAGAATCCTAAGAATAA GATTACTGCAGTACCGGCCGAGGAAGAGGAAATCTGGGGTGCAACCTTCAAGGTAACAAAATGTCATGAGTTTAAATAGATTTGCTGGTACAACCTGAAT TCTTCTCTGTATTACTACATTAGATTAGATAAAATCACCATCCTCCTGAAAAAAAAACAATGTTCTCTCATTTCATTTAATGGAGTTACCAAGAGATAAA ATTAAAAATGGAATTTTTTATTAATGTTTTATTCATTTTCTGAAGTAGTAAACAATATGGAACCATTTTTTACTCTCTCTAAAGTGTCATATTATAAGAT GGATGAAGTATTTAATCTACTCACAGGTTGATTTCCAAAAAAAATGGTTTGCATTAGTAGTCTATTGTCTATTTCACTCAACTTATCTGGTTTTGATATG TTTACGGTGTTTTAAATTGCGGTTGGGGTCGCAATTGCAGTTAATGTGATTGTGGTTATTGCGGACGTTGCGATATGGACTGCGGCCGTTGCAGTGTGAA TTATTTTGTGATTAAAAAACTATTTTTGAATTCGATGCTGCCTGATGCGATCCAAATGCGGC
• Tissue: pods
• Gene name: LI_gene_179574;
• Additional information: details;

Expression of Ll_transcript_378117

FPKM

• PAB: 2.1
• PNAB: 0.3
• PS1: 0.4
• PS2: 1.1
• PS3: 0.4
• PW1: 0.9
• PW2: 3.2
• PW3: 3.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378117

• Blastp: Stem-specific protein TSJT1 from Nicotiana with 45.64% of identity
• Blastx: Stem-specific protein TSJT1 from Nicotiana with 45.64% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419169.1)
• Pfam: Aluminium induced protein (PF12481.7)
• Rfam: -
• GO: -