Id Trinity | TRINITY_DN50745_c1_g2_i4 |
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Name Transcript | Ll_transcript_379726 |
Sequence | ATTGCAATTCACCTCCCATTATTGTTAATTATTACAATCCTGTCCGAACCGGGAACATGTACCTAGGTCTACCTGATCAAACCGATTCTTTAGTTAAGGT AACCATGTACCACTTGAACCAACTCGTTGTTAAACGAAGATCCATATGAAAAGACATAACTTTTCCAATAATCTTTATATATTCCTCAAATCTCTACCTT CTTCACTTTATTCTCACTCAAAATCCATACCAAAAAAGTGATTTTTATTTTTTCTGATTTATATTGCTTAAGTGATTTTTCACTCACTTCACCACCTCTC ACTTTTACTTCACTCTCAGATCTCTCTCTTCTGACACATACCATTCACTTCGTTGTTGTGACAAAAAGTGGAAGAACATAAAGGGCAAAGGAGAACAAAG TTTGAGATTTCGAGGTAGACTGGTTTAGATAATCCGAAAGCAAAATGATTATTGATATGCCTCCTTCCACAGCCCTGAATGTGAGAGCAAGCAGATCTTC CCTTAGCTCTAGCAATGGCAATGAGGATATTCCGGTACATAACTATGCTAACGATAACAACGGTGATGATGGATATGACAGTGATAGCTCGAATTTTGCA CCACCCACATCATCAACTCCATCAGTGGCTGTTCCAGCAGAACTCGCTGGAGCTGTACATTTAGTTGACCGATTCCAGGTGGACGGGTTTGTAAAAATGA TGCAGAAACAAATCCAATCTGCTGGGAAACGTGGATTTTTTTTCTAAAAGATCTGTCGGTCCCCAAGTTCGAGAGAAGTTTACATTTGAGGACATGCTGT GTTTCCAAAAGGAACCAATACCGACATCATTGCTTAAGATTAATAGTGATTTAGTAAGTCGTGCAATAAAACTATTCCAGATGGTCTTGAAATATATGGG AGTTGATTCATCTGATCATGTAACTCCAATAAGCTTTGATGAACGAGTTGAGCTTGTAGGGAAACTATACAAGCAAAGTTTGAAACGTTCAGAACTTCGG GATGAACTTTTTGTTCAGATATCAAAACAAACAAGAAATAACCCTGAGAGACAATCCTTAATTAAAGCCTGGGAGCTCATGTATTTATGTGCATCCTCCA TGCCTCCGAGTAAAGACATTGGGGGTTATCTATCAGAATATGTTCATAACGTAGCACATGATGTGGCTACTGATCCCGAAATCCAAGCCCTGGCATTAAA TACATTAAATGCTTTGAAGAGCTCTGTCAAGGCCGGTCCTAGGCATATAATACCTGTGCGTGAGGAGATTGAAGCTTTGTTGACCGGGAGAAAGCTCACA ACCATAGTGTTTTTCCTGGATGAAACTTTTGAAGAAATTACCTATGACATGTCAACAACAGTTGCTGATGCTGTTGAGGAACTTGCAGGACTCATTAAAC TGTCAACATACTCTAGCTTTAGTTTGTTTGAATGTCGTAAAGTTGTGACCAGCTCCAAATCACCTGATCCTGGGAGCGAGGAGTATGTTGGGTTAGATGA TAACAAATATATTGGGGATCTCCTGGCAGAATTTAGATCAGCGAAGGATCGAAGTAAGGGAGAAATCTTGCATTGTAAACTGATATTCAAGAAGAAGTTA TTTCGCGAGTCCGATGAAGCTGTAACCGATCCAATGTTTGTGATATTGTCCTACGTACAATTGCAACATGATTATATTTTGGGTAATTACCCTATTGGAA GGGATGATGCTGCCAAGCTTTCTGCGTTACAAATTTTGACCGAGATTGGATTTGTTAGCACACCTGAATCAAGCACTGACTGGAATTCACTTTTGGAGCG ATTCTTGCCTAGACAAATTGCAATGACACGAGCAAAACGTGAATGGGAGTTGGACATTCTTTCTCGTTATCATTCATTGGAGCATCTAACAAAAGATGAT GCAAGACAACAGTTTCTCCGTATATTGAGAGCACTCCCTTATGGGAGTTCTGTTTTCTTCAATGTTCGTAAGATTGATGATCCTATTGGACTCTTGCCTG GACGAATAATATTGGGAATTAACAAAAGAGGGATTCATTTTTTCCGTCCAGTACCTAAGGAATATTTACATTCGGCTGAGTTGAGAGACATAATGCAATT TGGAAGCAGCAACATTGCAGTGTTTTTTAAAATGCGAGTTGCAGGTGTTCTTCACATATTCCAGTTCGAAACCAAGCAGGGAGAAGAAATTTGTGTGGCT CTTCAGACACATATAAATGATGTAATGCTGCGCCGCTATTCGAAAGCACGATCTGCTGCTAGTGGTTCTTCGAATGGAGATATTTCTAATAGTTTTAAGC CTTCTAATTTGGAATTATATGAAAAACGTGTTCAAGATTTGTCAAAACGGGTTGAAGATTCTCAAAGAAGTGTTGATCAATTGCTGGAAGAATTGCATGA GAAACGAATACAAGAAGAGAAAATGCAAGAAGAATTGGAAGGCTTGAAAGAGTCCTTTAAAGCTGATAAGCAAAATCTTGAGGAAGTTACAAATGATCGT GATAGGCTTAGATCATTATGCATGGAAAAAGATAAAGCACTTCAGGCTGCCATGCTAGAGAAAAGGAACGCGGAATCAAGGATGGCCAAGTTGAATAATC TTGCGACAGAGAACACTGCCAAGAAGGGTCTTGTTGGAGGAAATAACCAAGTGTTTCAAAAGCTTGAAGATGAGCAAAAACTTTGTAAAGACAAGCTTCA TGCAGCGGAAGAAACTATCAAAAGCTTGGCAAATGAAAAATTGATTTTGGAAGAGAAGTTATATGCACTTCAGAAGAGAACAGCTGACGAGGTTAGTTCT CTTCAACGGAAACTTGAGCAAGAACGCAAAGTTATGAAGTCTCAAGTGAATGACTTGGAAAGAAAGCTAGAAGTGTTTAGACAAGACTTAGCGGCAGCTG AGTCTACTATTTCAGTCAAGACCTCTGAGTTGGTTGCATTGCAGAATAATTTGAAGGAACTAGAAGAGTTGAGAGAAATGAAAGAGGACATCGATAGAAA GAATGAACAAACAGCTGCCATATTGAAGATGCAAGGGGCTCAACTAGCTGAGATGGAGTTGCTTTATAAGGAAGAGCAGGTTTTAAGGAAACGTTATTTC AATACAATAGAAGATATGAAAGGCAAGATCAGAGTTTACTGCAGGCTACGACCTCTTAACGAGAAAGAGATTGCCGAGAAAGAAAGAGGAGCTGTTGCTA AGGTAGATGAGTTTACAGTTGAACATTCATGGAAAGACGATAAACTGAAGCAGTACATATATGATCGTGTATTTGGTGGCGATGCAACTCAAGAAAGCGT ATTTGAGGATACAAGGTATTTGGTGCAATCTGCTGCAGATGGTTATAATGTCTGCATTTTTGCATATGGTCAAACTGGCTCGGGGAAGACATTTACAATC TATGGAAGTGAAAACAACCATGGGCTTACCCCTCGTGCTACTGCAGAACTTTTCAGAATTATAAGAAGAGATAGTAACAAGTATTCTTTTTCATTGAAGG CTTACATGGTGGAATTATATCAAGACACCCTTATAGATCTTCTGTTACCTAAGAACGCAAAGCATTTAAAATTGGATATCAAGAAGGATTCATCGGTAAT TATCTCTATGTTATCATTGCATATTTCCATTTGTATATATTTTGTTACTTAAATGCAAAGCATTAAAAATTGGGTGCCCAGAAAGATCTAAGGTGTTGAT CTGTATACTGGTAATTACGATTTCTCAGAAAATTCATTGACCTGTATGGTCATGTTTAGTATTTTCCATTTTCTGAACCATACTTTCTAGCAATTCTACA GGTAGGATGCTTTCATAAAACTTCGGAAAAGTTTCAAAATATGCTACTTTGGAATTATGGAACCTGCCAAAGATGCTTAAAATTTGGACTTAAAAATTCT TATATCTTGGGTTGCTTGCATTTTTTGATGTTAGGGAATGGTAGCTGTGGAAAATGTAACAGTTCTGTCAATTTCTACCATAGAAGAATTGAATAGCATA ATACAAAGAGGATCTGAACGGCGACATATATCTGGGACACATATGAATGAAGAAAGTTCAAGATCTCATCTTATTCTATCAATTGTAATTGAAAGTACCA ATCTCCAAAGTCAATCAGTTGCAAGGGGAAAGCTGAGTTTTGTGGATCTTGCCGGTTCGGAAAGAGTGAAAAAGTCGGGTTCAGCCGGTAGCCAACTCAA GGAAGCTCAAAGTATCAACAAATCGTTATCAGCGCTCGCAGATGTTATTAGTGCTTTGTCTTCTGGTGGTCAACACATACCCTACAGGAATCATAAGTTA ACCATGTTAATGAGTGATTCACTTGGTGGTAATGCCAAAACACTCATGTTTGTGAATGTTTCTCCAGCAGAATCAAGCTTGGATGAGACACATAATTCTC TAATGTATGCATCAAGAGTGAGATCAATTGTGAATGATCCAAGCAAAAATGTTTCTTCAAAAGAGATAGCTAGACTCAAGAAG BLAST |
Tissue | pods |
Gene name | LI_gene_179581; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_379726
Blastp | Kinesin-like protein KIN-14E from Arabidopsis with 73.96% of identity |
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Blastx | Kinesin-like protein KIN-14E from Arabidopsis with 73.85% of identity |
Eggnog | Kinesin family member(COG5059) |
Kegg | Link to kegg annotations (AT5G65930) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423888.1) |
Pfam | MyTH4 domain (PF00784.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |