Id Trinity | TRINITY_DN50745_c1_g2_i5 |
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Name Transcript | Ll_transcript_379729 |
Sequence | ATTGCAATTCACCTCCCATTATTGTTAATTATTACAATCCTGTCCGAACCGGGAACATGTACCTAGGTCTACCTGATCAAACCGATTCTTTAGTTAAGAT CTCTCTCTTCTGACACATACCATTCACTTCGTTGTTGTGACAAAAAGGTTGGATTTTTATTTCAATTTTTGTTATATATTTGAATGTGATTAACTGCATT TTAAGTGGGTCTTTCCAGTTTTTAGTAAAAGTGAAATTTTTTACTGCTTCCAAATGGTTCTTGAAAGTTTCTTTCTTTTTATCGATCTTGTGCTTTCATG TTTGATTTTTCAAGTATTTTGATTCCTGGCCTTGTTTTTTGCCCTTCATAATTTTTGTGTGTATTTGATAAATTTGATAATTGAGTAACAAGGCGTTGTT ATAGTGGTGTAAAGCTCCGTTAGAATCCGAGAAAGACTACAAGTTCAAGATTTCGATTCCTCTGAGCTACACTTCTTGATATTATAGTCACGCGCCCCGA AATGATTGTTTCCTTACCCATGAGGATACTCTTGGAAGTACAAAAAATGGAAGAACATAAAGGGCAAAGGAGAACAAAGTTTGAGATTTCGAGGTAGACT GGTTTAGATAATCCGAAAGCAAAATGATTATTGATATGCCTCCTTCCACAGCCCTGAATGTGAGAGCAAGCAGATCTTCCCTTAGCTCTAGCAATGGCAA TGAGGATATTCCGGTACATAACTATGCTAACGATAACAACGGTGATGATGGATATGACAGTGATAGCTCGAATTTTGCACCACCCACATCATCAACTCCA TCAGTGGCTGTTCCAGCAGAACTCGCTGGAGCTGTACATTTAGTTGACCGATTCCAGGTGGACGGGTTTGTAAAAATGATGCAGAAACAAATCCAATCTG CTGGGAAACGTGGATTTTTTTCTAAAAGATCTGTCGGTCCCCAAGTTCGAGAGAAGTTTACATTTGAGGACATGCTGTGTTTCCAAAAGGTAATCAGTTC AAATATCAGCTTTTCGAAGATACGTGTGATGCTAATTGTTTTTAATGTACGAAATGCTAACTGGCTAATTATTGTAGGAACCAATACCGACATCATTGCT TAAGATTAATAGTGATTTAGTAAGTCGTGCAATAAAACTATTCCAGATGGTCTTGAAATATATGGGAGTTGATTCATCTGATCATGTAACTCCAATAAGC TTTGATGAACGAGTTGAGCTTGTAGGGAAACTATACAAGCAAAGTTTGAAACGTTCAGAACTTCGGGATGAACTTTTTGTTCAGATATCAAAACAAACAA GAAATAACCCTGAGAGACAATCCTTAATTAAAGCCTGGGAGCTCATGTATTTATGTGCATCCTCCATGCCTCCGAGTAAAGACATTGGGGGTTATCTATC AGAATATGTTCATAACGTAGCACATGATGTGGCTACTGATCCCGAAATCCAAGCCCTGGCATTAAATACATTAAATGCTTTGAAGAGCTCTGTCAAGGCC GGTCCTAGGCATATAATACCTGTGCGTGAGGAGATTGAAGCTTTGTTGACCGGGAGAAAGCTCACAACCATAGTGTTTTTCCTGGATGAAACTTTTGAAG AAATTACCTATGACATGTCAACAACAGTTGCTGATGCTGTTGAGGAACTTGCAGGACTCATTAAACTGTCAACATACTCTAGCTTTAGTTTGTTTGAATG TCGTAAAGTTGTGACCAGCTCCAAATCACCTGATCCTGGGAGCGAGGAGTATGTTGGGTTAGATGATAACAAATATATTGGGGATCTCCTGGCAGAATTT AGATCAGCGAAGGATCGAAGTAAGGGAGAAATCTTGCATTGTAAACTGATATTCAAGAAGAAGTTATTTCGCGAGTCCGATGAAGCTGTAACCGATCCAA TGTTTGTGATATTGTCCTACGTACAATTGCAACATGATTATATTTTGGGTAATTACCCTATTGGAAGGGATGATGCTGCCAAGCTTTCTGCGTTACAAAT TTTGACCGAGATTGGATTTGTTAGCACACCTGAATCAAGCACTGACTGGAATTCACTTTTGGAGCGATTCTTGCCTAGACAAATTGCAATGACACGAGCA AAACGTGAATGGGAGTTGGACATTCTTTCTCGTTATCATTCATTGGAGCATCTAACAAAAGATGATGCAAGACAACAGTTTCTCCGTATATTGAGAGCAC TCCCTTATGGGAGTTCTGTTTTCTTCAATGTTCGTAAGATTGATGATCCTATTGGACTCTTGCCTGGACGAATAATATTGGGAATTAACAAAAGAGGGAT TCATTTTTTCCGTCCAGTACCTAAGGAATATTTACATTCGGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGCAACATTGCAGTGTTTTTTAAAATG CGAGTTGCAGGTGTTCTTCACATATTCCAGTTCGAAACCAAGCAGGGAGAAGAAATTTGTGTGGCTCTTCAGACACATATAAATGATGTAATGCTGCGCC GCTATTCGAAAGCACGATCTGCTGCTAGTGGTTCTTCGAATGGAGATATTTCTAATAGTTTTAAGCCTTCTAATTTGGAATTATATGAAAAACGTGTTCA AGATTTGTCAAAACGGGTTGAAGATTCTCAAAGAAGTGTTGATCAATTGCTGGAAGAATTGCATGAGAAACGAATACAAGAAGAGAAAATGCAAGAAGAA TTGGAAGGCTTGAAAGAGTCCTTTAAAGCTGATAAGCAAAATCTTGAGGAAGTTACAAATGATCGTGATAGGCTTAGATCATTATGCATGGAAAAAGATA AAGCACTTCAGGCTGCCATGCTAGAGAAAAGGAACGCGGAATCAAGGATGGCCAAGTTGAATAATCTTGCGACAGAGAACACTGCCAAGAAGGGTCTTGT TGGAGGAAATAACCAAGTGTTTCAAAAGCTTGAAGATGAGCAAAAACTTTGTAAAGACAAGCTTCATGCAGCGGAAGAAACTATCAAAAGCTTGGCAAAT GAAAAATTGATTTTGGAAGAGAAGTTATATGCACTTCAGAAGAGAACAGCTGACGAGGTTAGTTCTCTTCAACGGAAACTTGAGCAAGAACGCAAAGTTA TGAAGTCTCAAGTGAATGACTTGGAAAGAAAGCTAGAAGTGTTTAGACAAGACTTAGCGGCAGCTGAGTCTACTATTTCAGTCAAGACCTCTGAGTTGGT TGCATTGCAGAATAATTTGAAGGAACTAGAAGAGTTGAGAGAAATGAAAGAGGACATCGATAGAAAGAATGAACAAACAGCTGCCATATTGAAGATGCAA GGGGCTCAACTAGCTGAGATGGAGTTGCTTTATAAGGAAGAGCAGGTTTTAAGGAAACGTTATTTCAATACAATAGAAGATATGAAAGGCAAGATCAGAG TTTACTGCAGGCTACGACCTCTTAACGAGAAAGAGATTGCCGAGAAAGAAAGAGGAGCTGTTGCTAAGGTAGATGAGTTTACAGTTGAACATTCATGGAA AGACGATAAACTGAAGCAGTACATATATGATCGTGTATTTGGTGGCGATGCAACTCAAGAAAGCGTATTTGAGGATACAAGGTATTTGGTGCAATCTGCT GCAGATGGTTATAATGTCTGCATTTTTGCATATGGTCAAACTGGCTCGGGGAAGACATTTACAATCTATGGAAGTGAAAACAACCATGGGCTTACCCCTC GTGCTACTGCAGAACTTTTCAGAATTATAAGAAGAGATAGTAACAAGTATTCTTTTTCATTGAAGGCTTACATGGTGGAATTATATCAAGACACCCTTAT AGATCTTCTGTTACCTAAGAACGCAAAGCATTTAAAATTGGATATCAAGAAGGATTCATCGGGAATGGTAGCTGTGGAAAATGTAACAGTTCTGTCAATT TCTACCATAGAAGAATTGAATAGCATAATACAAAGAGGATCTGAACGGCGACATATATCTGGGACACATATGAATGAAGAAAGTTCAAGATCTCATCTTA TTCTATCAATTGTAATTGAAAGTACCAATCTCCAAAGTCAATCAGTTGCAAGGGGAAAGCTGAGTTTTGTGGATCTTGCCGGTTCGGAAAGAGTGAAAAA GTCGGGTTCAGCCGGTAGCCAACTCAAGGAAGCTCAAAGTATCAACAAATCGTTATCAGCGCTCGCAGATGTTATTAGTGCTTTGTCTTCTGGTGGTCAA CACATACCCTACAGGAATCATAAGTTAACCATGTTAATGAGTGATTCACTTGGTGGTAATGCCAAAACACTCATGTTTGTGAATGTTTCTCCAGCAGAAT CAAGCTTGGATGAGACACATAATTCTCTAATGTATGCATCAAGAGTGAGATCAATTGTGAATGATCCAAGCAAAAATGTTTCTTCAAAAGAGATAGCTAG ACTCAAGAAGâBLAST |
Tissue | pods |
Gene name | LI_gene_179581; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_379729
Blastp | Kinesin-like protein KIN-14E from Arabidopsis with 75.55% of identity |
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Blastx | Kinesin-like protein KIN-14E from Arabidopsis with 75.79% of identity |
Eggnog | Kinesin family member(COG5059) |
Kegg | Link to kegg annotations (AT5G65930) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423888.1) |
Pfam | MyTH4 domain (PF00784.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |