Ll_transcript_378622

• Id Trinity: TRINITY_DN50746_c3_g1_i15
• Name Transcript: Ll_transcript_378622
• Sequence: AAGAAGGGGCTATGTCGTTTTTACTCAACACACTTTTTTACAGTGAGGAAATGACAACAAAAAAAGAGAGAGAGTGAAAACGACGTTGTTTCTAGAAGAA GGGGCTATGTTGTTTTAGCTTCGCCTGACTAACATTTTTCTCTCCCTTCTTCGATTTCATTCTAGTACCTGCAATGCAAGTTCTCTCTCATTTCCCATTT TATCTCTCTTCTCTTTCTTTTTCCTAATTATCATCATTTTTATTACTATCACTTTTCCCTGTACCCTTTTTTCTCTGATTATTGTTTTGCACTGCATGCT TTGTTTTAGCTTTTCTAGGACGGAGTTTTGAATTGGGTAATTGAAAAAACTGTTTTTTTTAATAATGTGCTGATGGATAGGTTGGTGTACATTAGAATAG TTGTGGTAAAATGGAAGAAGCTTTTAGAGATTGGTTTCTAGATTACATAGTCACACCCATATGTATGCTGTGTAACCAACTTACTAAGTTTTTTTAGCTA TTGTAATCTCGATCTAGTATTATCTTTGGAGGTTTCTTCTGCATTTACATTTTATTGAAGTTGAATTGTTTTTTAATTAGATTATCGAAGTCGTATTCGC CATATTTTGTTATTAAGGTTAGCCGTGTCGATAATCCAGTATTTCCTCTCTGTGTCCCTTGTGCCTTTCTCTAATTGTGAGAACTTAAGCCATTAACTAA GGTTTGATCTTTACTGAATTGAAAGTTTTCTTGCTTCTCTCAGCTTGTGCTTCTATTTAATCCATCATATGATTCATGTTAAGGAAATGGTGGAAAGAAA TTCTCAATGAAAAACCCTTTTTCTCTGTAAATTTCGAGTGCTTGTTTTTTTTTTCTGTTGTAGGATACAGGCAAAGTATCTTGTACGAATATGGATATGT CTATGCCAATATAAATTTTAAAAAAAGTGTTGGGAAGTAAGTCCAACAATGTCTGTCTCGTTATATTAGGAATGGTTTAAATACATGTTGGGATACTCCT TCATTACCAACTGGTTGAAATAGAACCTTAACATGGTATTAGAGCCAAACTACTTCTCTCTGATTGTCAAGGGCCATAAAAAGCCCTTTCCTATTGGATC AAAGGTAACCCTTCATGTAGTCCTGCAAACTCCACATGATGGGAAACACGTCCCACATTGCCTGCCTCATTAGACTATTCCTCTCATTGCCAATTGGTTT TGAGATGGAACCTGGGCAAAAAGTGTATATATATTTATCTTTATATAATAGAAATGTACACAGGAGCATGCAAATGTCACATGATGAGAGGCTAAGACCC TAATCCAGAGAATTGCGCAGATGAGAGACTAATTGTTTGAATTAGACGTAGCATCATAGTGTGGTTACGAAGAAAAAACCTAAGTTCCACCCCAAACGAC ATAGTTTTGGAATAACCCACACCCAAAGCATACCCAGCCTTAACGAACCAAATTAACAAATAATAATAACGAATTGGTACATGTACGGTATATACTCACA CGTTTCTATTGCGTACCAGTACACGTTGCGGGTACATCATTTTTGGAGTACCCATTCTTTAGTGCCTTCCTGTCCGCTGAGTATTTAATGCATTGCATTT CTCCTTAAATGATTGGTGATCATATCTTTTTGGTAGAGGATCAATACTAGTATAATAGGCATACTCTTCATGTAATGATACCCATTGTAACGTGGCGTTT CTAAGATGCCAAAGTGTCAATTACTAACTTGCATATTCTGAGTGATTGGGAACTTCGGGGCATATGATGACATCTATGTGGTCTTAAAAATATGATTGCT TACTTAAATCTGGTGGATGATCATTCATTAGCTTTATTATTGTTTTATGTTAATGTCCGGATTTCAATGTAGCCAGTTTAATGCATGTTTGTTTCAGGTT GAAATTTCCCTTTTTTCTATCGCAAGCTTGTAAAACAAGCTGGTCTTTACTTATTTGTCTTTCTTGTTTCCTTTTATGGGCAAATTATGAGGAAAGTTAA TTTTCACTTAAAAAAAGGCGGCCCAAGGCACAAGCCTTCTACTCGGTGAGGTTTGAGGAGAGTAGATATACACAACCTTACCCTTGCAAGCATAGAGACC ATTTCTGGGATTTGAACTCGTGACCTTCAAGTCATAAGGCAACAAACTTGTCGTTGTTCCAAGGCTCACCCTCCACTTTTTCACTTAGGTTAGCAAAAGA AGCAGTAATACCTGCTTGTACATCCTTTTTCTTTCCTCTCAATATACAGCTTGATGGTCTTCCGTTAGACTTGCATAAGCAAGAAAAGACAAAATAAAGA TCTACCATATAAAAGGCAGCCTAGAGCATGAGGCTCCCGCTTATTGATCTGGGGAGGATAGATGTACACAATTTTACCTTCATAAGTGGAGAGACTGTTT CCAGGATTTGAGCTCGTGACCTCTTGATTACTAAGCAGCAGTCTTACCATATTAGAATGATGTTTGAATTATTTGATGTTAATTTCGGGTAGGCCTTAGC TATAAGGTTCCCCCTGTTCCTTCTTAAAACTTCCTCCCAATATGATGTTTTTTTCCTTTTGTCTGCTTATTGGTTTGATACTAAGTTGTTGCCTTTCTCA TTTGTTTATGGAATGTCTTTCAGCAGGAAATTGTTGACTAATTAAATCTCAAGATTTCTTGACAGTTGACACCAATTTCTGCATCTACTTCTAAGTCCTC TGGATGCAAGATGGACGGTGGCCGCCAGCATCAAAACTGTAGGCAGAAGATAGAATATTACAGAGGAGCACATTCCCCGTGGAATATGGATGCCCAGCAT CAGCATGAAGTAAAGGAGCCAAATAATGCACTAGTTATGAATAAGAAAATCAGGTCCATTATTGCTGAAAGGCAGGCTGTCATTCTAGAACTTGAACTGG AGGCTGCTATATCTGAAAAGAATGAAGCCTTGGCTGCCCGAGATTTAGCCCTTCGGCAGAGGGATGAAGCACTTGCTCAGAGGGATAATGCCCTAATGGA ACGAGATATTGCCCTCGCAGCCCTTCAAAATAGGAACAATACTGTCAACTTGTCATTAGGTGGAGTTCAGTGTGGATCAAAGCGGACACACCAAGCTGCA TACAGCACAAAGGATATGCCAATAAGGGATGCCGCCCCAGTCACTGTTATAACTGCTGAAGCTGTCAAATCTCGTCAAGCTAAAAGATCGAAAGAGAACA AGGTAAGTAATTCTAAGGCATCGAAGTCACCTACCAAATTAGGCGAAGATTTAAACAGACATGCTTCTTCCCAAGGGACAAAGATCAAATCTGAATGGGA TAAGCTTGATGTTGGCTTGAATTTGGTTGCATTTGATGAAACTACCATGCCGGCCCCAGTTTGCACGTGCACCGGAGTACCACGGCAGTGCTACAAATGG GGGAGTGGAGGATGGCAGTCATCATGTTGCACCAACACATTGTCAATGTATCCCCTGCCACAGCTTCCAAACAAGCGGCATACGCGCATCGGAGGGCGAA AGATGAGTGGAAGTGTCTTTACAAGACTGCTCAGTAGGTTGGCATCAGAAGGCCATGATTTATCGGCACGGTTGGATCTTAAGAGTTACTGGGCCAGACA TGGAACAAATCGCTACATTACCATCAAGTAACCTGCAGTCAATCTTCTCCATGGATTAATGCCTTGATAAGCATGATATGCTTGAATTTTGTGAATGCAG TTAGTTGATTTTTCAATAGAAGGGCGTTTCCCTTTGTTATTTTCAGTTACTGATATGGCTAGACTAAACTTTTACCCCAACAAATGATGTAGCTGTTAAG TATTAGGATGTACATGTCACTCTATAGGTAGCCAGATTTAGAACCGATGGGTACCAAATGTCCACCCTTTTTCTTAAATCTCTCTACTTTTTCGATGTTT AAAATGTTCTAATCGATTATTACAAGATAGCTGAACAATCAGCAGAAATTGAAGTTCAATCTTCACCAATAAGGCAATAACCAAACTTATTTGAAATCTG AAACATTAATCTGTTTGAAATTCATTGTGAAGATTGCATTAAGTATCAGCAATGAAACAACTGAGACATACTTCTTACATGTGGTAAGATTTTTGATATG GTTTATGTATTTTCTATCATTCAC
• Tissue: pods
• Gene name: LI_gene_179589;
• Additional information: details;

Expression of Ll_transcript_378622

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 0.2
• PS2: 1.7
• PS3: 1.3
• PW1: 0.5
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378622

• Blastp: Protein BASIC PENTACYSTEINE4 from Arabidopsis with 57% of identity
• Blastx: Protein BASIC PENTACYSTEINE4 from Arabidopsis with 57% of identity
• Eggnog: Transcriptional activator(ENOG41116WE)
• Kegg: Link to kegg annotations (AT2G21240)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462511.1)
• Pfam: GAGA binding protein-like family (PF06217.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;