| Id Trinity | TRINITY_DN50746_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_378608 |
| Sequence | AAGAAGGGGCTATGTCGTTTTTACTCAACACACTTTTTTACAGTGAGGAAATGACAACAAAAAAAGAGAGAGAGTGAAAACGACGTTGTTTCTAGAAGAA GGGGCTATGTTGTTTTAGCTTCGCCTGACTAACATTTTTCTCTCCCTTCTTCGATTTCATTCTAGTACCTGCAATGCAAGTTCTCTCTCATTTCCCATTT TATCTCTCTTCTCTTTCTTTTTCCTAATTATCATCATTTTTATTACTATCACTTTTCCCTGTACCCTTTTTTCTCTGATTATTGTTTTGCACTGCATGCT TTGTTTTAGCTTTTCTAGGACGGAGTTTTGAATTGGGTAATTGAAAAAACTGTTTTTTTTAATAATGTGCTGATGGATAGGTTGGTGTACATTAGAATAG TTGTGGTAAAATGGAAGAAGCTTTTAGAGATTGGTTTCTAGATTACATAGTCACACCCATATGTATGCTGTGTAACCAACTTACTAAGTTTTTTTAGCTA TTGTAATCTCGATCTAGTATTATCTTTGGAGGTTTCTTCTGCATTTACATTTTATTGAAGTTGAATTGTTTTTTAATTAGATTATCGAAGTCGTATTCGC CATATTTTGTTATTAAGGTTAGCCGTGTCGATAATCCAGTATTTCCTCTCTGTGTCCCTTGTGCCTTTCTCTAATTGTGAGAACTTAAGCCATTAACTAA GGTTTGATCTTTACTGAATTGAAAGTTTTCTTGCTTCTCTCAGCTTGTGCTTCTATTTAATCCATCATATGATTCATGTTAAGGAAATGGTGGAAAGAAA TTCTCAATGAAAAACCCTTTTTCTCTGTAAATTTCGAGTGCTTGTTTTTTTTTTCTGTTGTAGGATACAGGCAAAGTATCTTGTACGAATATGGATATGT CTATGCCAATATAAATTTTAAAAAAAGTGTTGGGAAGTAAGTCCAACAATGTCTGTCTCGTTATATTAGGAATGGTTTAAATACATGTTGGGATACTCCT TCATTACCAACTGGTTGAAATAGAACCTTAACATGGTATTAGAGCCAAACTACTTCTCTCTGATTGTCAAGGGCCATAAAAAGCCCTTTCCTATTGGATC AAAGGTAACCCTTCATGTAGTCCTGCAAACTCCACATGATGGGAAACACGTCCCACATTGCCTGCCTCATTAGACTATTCCTCTCATTGCCAATTGGTTT TGAGATGGAACCTGGGCAAAAAGTGTATATATATTTATCTTTATATAATAGAAATGTACACAGGAGCATGCAAATGTCACATGATGAGAGGCTAAGACCC TAATCCAGAGAATTGCGCAGATGAGAGACTAATTGTTTGAATTAGACGTAGCATCATAGTGTGGTTACGAAGAAAAAACCTAAGTTCCACCCCAAACGAC ATAGTTTTGGAATAACCCACACCCAAAGCATACCCAGCCTTAACGAACCAAATTAACAAATAATAATAACGAATTGGTACATGTACGGTATATACTCACA CGTTTCTATTGCGTACCAGTACACGTTGCGGGTACATCATTTTTGGAGTACCCATTCTTTAGTGCCTTCCTGTCCGCTGAGTATTTAATGCATTGCATTT CTCCTTAAATGATTGGTGATCATATCTTTTTGGTAGAGGATCAATACTAGTATAATAGGCATACTCTTCATGTAATGATACCCATTGTAACGTGGCGTTT CTAAGATGCCAAAGTGTCAATTACTAACTTGCATATTCTGAGTGATTGGGAACTTCGGGGCATATGATGACATCTATGTGGTCTTAAAAATATGATTGCT TACTTAAATCTGGTGGATGATCATTCATTAGCTTTATTATTGTTTTATGTTAATGTCCGGATTTCAATGTAGCCAGTTTAATGCATGTTTGTTTCAGGTT GAAATTTCCCTTTTTTCTATCGCAAGCTTGTAAAACAAGCTGGTCTTTACTTATTTGTCTTTCTTGTTTCCTTTTATGGGCAAATTATGAGGAAAGTTAA TTTTCACTTAAAAAAAGGCGGCCCAAGGCACAAGCCTTCTACTCGGTGAGGTTTGAGGAGAGTAGATATACACAACCTTACCCTTGCAAGCATAGAGACC ATTTCTGGGATTTGAACTCGTGACCTTCAAGTCATAAGGCAACAAACTTGTCGTTGTTCCAAGGCTCACCCTCCACTTTTTCACTTAGGTTAGCAAAAGA AGCAGTAATACCTGCTTGTACATCCTTTTTCTTTCCTCTCAATATACAGCTTGATGGTCTTCCGTTAGACTTGCATAAGCAAGAAAAGGTTGAGCATAGT TTATTGTTTGAATCTGTTGTTTGTTGAATCTGAATCCAAAATTGTAAAATGAATAGTGGTCTAATTGTTTCTGCTTTCATCTGTAATATTTTAGACAAAA TAAAGATCTACCATATAAAAGGCAGCCTAGAGCATGAGGCTCCCGCTTATTGATCTGGGGAGGATAGATGTACACAATTTTACCTTCATAAGTGGAGAGA CTGTTTCCAGGATTTGAGCTCGTGACCTCTTGATTACTAAGCAGCAGTCTTACCATATTAGAATGATGTTTGAATTATTTGATGTTAATTTCGGGTAGGC CTTAGCTATAAGGTTCCCCCTGTTCCTTCTTAAAACTTCCTCCCAATATGATGTTTTTTTCCTTTTGTCTGCTTATTGGTTTGATACTAAGTTGTTGCCT TTCTCATTTGTTTATGGAATGTCTTTCAGCAGGAAATTGTTGACTAATTAAATCTCAAGATTTCTTGACAGTTGACACCAATTTCTGCATCTACTTCTAA GTCCTCTGGATGCAAGATGGACGGTGGCCGCCAGCATCAAAACTGTAGGCAGAAGATAGAATATTACAGAGGAGCACATTCCCCGTGGAATATGGATGCC CAGCATCAGCGTGAAGTAAAGGAGCCAAATGCACTAGTTATGAATAAGAAAATTAGGTCCATTATGGCTGAAAAGCAGGCTGCCATTTTAGAACTTGAAC TGGAGGCTGCTATATCTGAAAAGAATGAAGCCTTGGCTGCCCGAGATTTAGCTTTTAGGCAGAGGGATGAAGCACTTGCTCAGAGGGATAATGCTGTAAT GGAACGGGATATTGCCCTCGCAGCCCTTCAAAAGCGGAACAATGCTGTCAACTTCCCATCAGGTGGAGTTCAATGTGGTTCAAAGCGGATGCACCAAGCT GCTTACAGAACAAAGGATATGCCAGTAAGGGATGCCACCCCAGTGACTGTTATAACTGCTGAAGCTGTCAAATCTCGTCAAGCTAAAAGATTGAAGGAGA ACATGGTAATTAATTCTAAGGCATCAAAGTCACCTACCAAATTAGGTGAAGATTTAAATAGGCACGCTTCTTCCCAAGGGACAAAGATCAAATCTGAATG GGATAAGCTTGATGTTGGCTTGAAGTTGGTTGCATTTGATGAAACTATCATGCCGGCCCCAGTTTGTACGTGCACGGGAGTACCACGGCAGTGCTACAAA TGGGGGAGTGGTGGATGGCAGTCATCTTGTTGCACCACGGCAATGTCAATGTACCCACTACCACAGCTTCCGAATAAGCGGCATGCACGCATTGGGGGGC GAAAGATGAGTGGGAGTGTCTTTACAAGACTGCTCAGTAGGTTAGCATCAGAAGGCCATGATTTATCAACACCGTTGGATCTTAAGAGTTACTGGGCCAG ACATGGAACAAATCGCTACATTACCATCAAGTAAACTGCAGTCAATCTTCTCCATGGACCAATGCCTTGATAAGTAATGATATGCTTTAATTTTGTGAAT GCAGTTAGTTGATTTTTCAATAGAAGGGTGTTGCTCTTGCTTATTTTCAGTTATTGGTATAGCTAGACCCGATTTTTGTCCCAACAAATGGGATAGCTGT GAACTATCATCATGTACATTTAGCTTTATAGGTAGCCAGATTTAGTACTGATGGGGTCCCCCATGCTTTCAGCTTTGCCTGTCTATTATGAAATCGTTGA GTAGAAAACAATTGTCCACCTTTTTCTTAAACCCCTCTGTTTTCGATGTTCTAATCGAATACCTGCGTAATCCGCAGAAATTGAGGAAAGACAAGAAATA AAAATCCAAGCCCATCGTCATCTTCATGGTGCATTAGGTACTTCGAAATTATAAGATTCATTTGCATCTATTGCTTGGAATACTTCTTGAAGTTTCATTT CATAGTCAATGCTCTGGTAACATTTTGCTAGCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_179589; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_378608
| Blastp | Protein BASIC PENTACYSTEINE4 from Arabidopsis with 55.37% of identity |
|---|---|
| Blastx | Protein BASIC PENTACYSTEINE4 from Arabidopsis with 54.4% of identity |
| Eggnog | Transcriptional activator(ENOG41116WE) |
| Kegg | Link to kegg annotations (AT2G21240) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463241.1) |
| Pfam | GAGA binding protein-like family (PF06217.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |