Ll_transcript_377484

• Id Trinity: TRINITY_DN50748_c0_g1_i6
• Name Transcript: Ll_transcript_377484
• Sequence: GATTTTGATCCCTGCAATTTCGTTTTGTCATTTTATGCTGTTTCTTTATATGATTTCTACTTCAAAATACCACTGAGTTCAATTTCGTCTTAGCATGCCA GTGGTATTTTGGATTTTTTTTATTGATGTTTGTGTTTGATGAGTTGCGTGATTTAGTTATGACTGAGTAGAAGTAGGTCCACAGTCCTCCCTAATGACCT ATAATAATTCAACACAGTGTTCTCTTCAGAAGTATAAGTAGCTTACTTATGGTATCTCCTTGTATATTGTTTGTACTGGTAGTTAGCAGTAAAAATAATT TTTCAAATGAGGTAAATCATATCACTGCTTTCAACTGTATAAAGCATTCAGATCACAGTTTTGTTTGTAAAAATAATTTGTAAATATGACCATTGTAGGG CATGAAAGTATTTTCCCATGACTTTTGTAATCAATTGTATTGGTACTTCATTTACTTGCGGACCAGATTGATACTCTATTATCTGACATACTACCATTTT ACATATTTTGTTCTTCAGTCCTTCCGAAGCAGCTAGGCGAGGTCGATCTCCTCCGCCTCCGATCAAAAGAACTTCTCCTCCACCAAGGAAGGCGTCTCCT TTACGTGAATCACTTGTTCTTCATGTAGAAAAACTCAGCAGGAATGTCAATGAAGGCCATTTGAAAGAAATTTTTGGTAACTTCGGTGAGGTTCTAAGTG TGGAGTTGGCTATGGATCGAGCTGTTAATCTTCCTAAAGGATATGGATATGTGCATTTCAAGACAAGAGAGGATGCCGAAAAAGCATTATTGTACATGGA TGGTGCCCAAATAGATGGCAACATTGTTAAGGCCAGATTTACTCTACCACCACGACAGAAAGTTTCACCACCCCCAAAGCCTTCTGCTGTTGCTCCAAAG AGAGATGCTCCTAGGAGTGATAATGCTGGTGCAGATGCTGAAAAAGATGGGCCAAAGCGGCAAAGAGAACCATCTCCACGGAGAAGACCTCTCTCACCGA GAAGGAGATCTCCTGTCCCTCGTAGAGCTGGATCTCCAAGAAGACCAGATTCTCCTCGCCGTCGTGCAGATTCTCCCGTTCGTCGTCGATTAGACTCTCC CCCCTATCGTCGTGGAGACACACCTCCTAGGAGGAGGCCCATTTCTCCTGGAAGAGGTCGTTCTCCATCTCCACCAAGGCGCCCTAGATCTCCTGGCAGA GTCTCACCTAGAAGGATGCGTGGGAGCCCCATTCGTAGACGTTCTCCTCCTCCATTAAGGCGCCGTTCACCACCTAGAAGAGCCCGTAGTCCTCCTAGAA GATCTCCAATTGGTCGAAGACGTAGTCGCTCTCCAGTACGCAGGTCTGCACGCTCACGTTCTAGATCATTCTCACCTCGAAGGTAATTTTATTGAATGTC TATGTTTCAGTTCACACTAAAATGAGCCAGCATTATTTTTTTCCCTATTTATAATCTATTTTTTGCCAACTCATTTGTTTTAACGCATTAGAATATTTTG AAGTGTGGAATGTTGATGAGCATCCGAAATTATGATTTTTGGTCTTGGAGCGGATGGACTTTGTAGTTATCAAAATGTTCTCAAGTACTGACCCAGTGAA AGCTAATCTGATGCTTCATTTTTTGAAAACAAGAAACTAGTCAGTGGTGTAGAGTTCCATGTATTAACTAAAATCATTGGTGGTTGTATGAAAACCTGTT GTGTAGGAAGACATGCTTATTTCACAGTGTACTCTGATTCCTCACACCAACCTTAGTATGTATATGCATTGGAAAATATATGGGAAATTTTAACTCTATT ATTTCTGGATCTCTAGTTATGTTATGGACAAATTAATCCATTAAGATAAATGTGCAACATTGAAAATATGTAAAAGTTTGAATAAAATTTTCCTCTTGGC AGGGGTCGACCACCGATGAGACGTGGGAGGTCATCATCCTACTCTGACTCACCTAGTCCACGCAAGGTGTCTTTATTTTTGTGTGTTTTAAGATGACATT ATTCTTGCTTTTCATTCCATGGCTCATCTCCATAATTCTGACAGGTATCTCGGAAAACAAAGAGCCGCAGTCCAAGGTTATTTATTCCATATAATTGTTT CTCATTTGATTCCTCTTCTTGTTTGGTAACAGTCAGTTTTATTTTCCTGGCAGATTCCTGTTGTAACATGTTTAAAATTATCGGTGTTTTTTCCTTCTAT TTTTCTTCATTACTGATGTGTTTTCCCCCCTTCCTTTTCGACCTATGTAATCACTTCTGGTCTAAAACAAAAGTAAAATAGACTCCACTTCTCTTGTTTT GTGAAGTGAAGGATTTGTTCTCGTTATATGATAGGGAATTAAAACATCACTAGCTCCATGAAAAACGACCATTCATATGGGAATATAATTAACTAATATA TGGTTTTGGAGCCTGTCAGAAATGACTATTTCTGTAAAATTTACCGCTGAGCTTCAGTCTTTCGCACAGAGCACAAGAGTAAAATTTTAGTTTGATGAAT GATTGATCTAAAGGAGAATAGACTCTTTGCTCAATTCTGATGTGTTTTTCTGCAATAAGATTTTAGTCGACAGCTTTTCTTCTGGGTTTCATATTTCCAT TTTAGAATATGTGAATTAGTAGGGCAACTCAATACATGAATCTCCAACTCAATGGGGTTTGGGGAGGGTAGATGTACGCAGTATTGCTTCCACAAGTGGA CATACTGTTTCCATGACCTGAACTACGAGTTAAGCAACCTTACCATTTCGTGGAGGTTCATTCCAGATTATTTGAATTAGGGTTGAACTATTATTTCATG GTGCACATATCTTGTTAAAACTGACATTTGTTAGATTCCCATTGCCACTAAATGGTTTTTTTTATCGGCAATGCCTGATTTAGTTTTACCATTCCTTTGG TTTGACTTCAATAATAATGTATAGGTAATTCTTATTTTATTTAATTGTATTTTCATCTGGTTCTTTGGTATGCTGAATTTTAGTTGTAATTTTAGGCCTT TGAGAGGAAGAGGCAGTAGCAACAGCAGCAGCAGCAGCTCACCACTCCCACCACCTCCACCTCCACCACCTCGCAAGCCGTAGATAGTTTCTGTACCTCT AGTGTCTCATTTTGTTGATGTTTCTGTGAAAAATCTATATCGGTTTATGAGAAGTTATTCTTGCTGCAATGAATGTGCTAGGGGATATATGTTACTTTAT CTTGTTGTCTGGATTCTCAAATACAGTTTATCTTGTAGCACTTTAAAAGAGTTGCTACAAACTTTCTGTTCCATTAATTTGGATTTGTGACCGACTTTAG CTTTGTTATTCTGCTGACATGCAAAATTTGAGAGATATGATGTTTTGATTTCTTGCATCAGGATTAGACTGAATTGAAAAATTGGTTGACACTCTTCACA AATTAATGGAATTGAATTTTCTAAGGATTTAATATGTGTATGATGTAACTGTTTT
• Tissue: pods
• Gene name: LI_gene_179604;
• Additional information: details;

Expression of Ll_transcript_377484

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.1
• PS2: 0.1
• PS3: 0.3
• PW1: 0.2
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_377484

• Blastp: Serine/arginine-rich splicing factor SR45 from Arabidopsis with 66.29% of identity
• Blastx: Serine/arginine-rich splicing factor SR45 from Arabidopsis with 80.34% of identity
• Eggnog: Rna-binding protein(COG0724)
• Kegg: Link to kegg annotations (AT1G16610)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443740.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;