Ll_transcript_377488

Id TrinityTRINITY_DN50748_c0_g1_i8
Name TranscriptLl_transcript_377488
SequenceCCATTTGAAAGAAATTTTTGGTACGTACTATTTTTCAAACTTTAGTTTCATGCCACATTGACACATTATGATTGCAATAGTATAAGTTCTATGTTGATAC TCTTTTAGGTACCTGCTTAATAGTTGGAGTTAGATGAGTTGTTAAATGTTCATTCAAATTTAATTAGTTTGGTCCAATGCCAATGTAAGCAGTTTCTCAC GGCAATGCATCAGCATAATGAAATTAAGCCCAATGCTACTTCTCTTTAGTTTCATTTTTATTGTAACTTCGGTGAGGTTCTAAGTGTGGAGTTGGCTATG GATCGAGCTGTTAATCTTCCTAAAGGATATGGATATGTGCATTTCAAGACAAGAGAGGATGCCGAAAAAGCATTATTGTACATGGATGGTGCCCAAATAG ATGGCAACATTGTTAAGGCCAGATTTACTCTACCACCACGACAGAAAGTTTCACCACCCCCAAAGCCTTCTGCTGTTGCTCCAAAGAGAGATGCTCCTAG GAGTGATAATGCTGGTGCAGATGCTGAAAAAGATGGGCCAAAGCGGCAAAGAGAACCATCTCCACGGAGAAGACCTCTCTCACCGAGAAGGAGATCTCCT GTCCCTCGTAGAGCTGGATCTCCAAGAAGACCAGATTCTCCTCGCCGTCGTGCAGATTCTCCCGTTCGTCGTCGATTAGACTCTCCCCCCTATCGTCGTG GAGACACACCTCCTAGGAGGAGGCCCATTTCTCCTGGAAGAGGTCGTTCTCCATCTCCACCAAGGCGCCCTAGATCTCCTGGCAGAGTCTCACCTAGAAG GATGCGTGGGAGCCCCATTCGTAGACGTTCTCCTCCTCCATTAAGGCGCCGTTCACCACCTAGAAGAGCCCGTAGTCCTCCTAGAAGATCTCCAATTGGT CGAAGACGTAGTCGCTCTCCAGTACGCAGGTCTGCACGCTCACGTTCTAGATCATTCTCACCTCGAAGGTAATTTTATTGAATGTCTATGTTTCAGTTCA CACTAAAATGAGCCAGCATTATTTTTTTCCCTATTTATAATCTATTTTTTGCCAACTCATTTGTTTTAACGCATTAGAATATTTTGAAGTGTGGAATGTT GATGAGCATCCGAAATTATGATTTTTGGTCTTGGAGCGGATGGACTTTGTAGTTATCAAAATGTTCTCAAGTACTGACCCAGTGAAAGCTAATCTGATGC TTCATTTTTTGAAAACAAGAAACTAGTCAGTGGTGTAGAGTTCCATGTATTAACTAAAATCATTGGTGGTTGTATGAAAACCTGTTGTGTAGGAAGACAT GCTTATTTCACAGTGTACTCTGATTCCTCACACCAACCTTAGTATGTATATGCATTGGAAAATATATGGGAAATTTTAACTCTATTATTTCTGGATCTCT AGTTATGTTATGGACAAATTAATCCATTAAGATAAATGTGCAACATTGAAAATATGTAAAAGTTTGAATAAAATTTTCCTCTTGGCAGGGGTCGACCACC GATGAGACGTGGGAGGTCATCATCCTACTCTGACTCACCTAGTCCACGCAAGGTGTCTTTATTTTTGTGTGTTTTAAGATGACATTATTCTTGCTTTTCA TTCCATGGCTCATCTCCATAATTCTGACAGGTATCTCGGAAAACAAAGAGCCGCAGTCCAAGGTTATTTATTCCATATAATTGTTTCTCATTTGATTCCT CTTCTTGTTTGGTAACAGTCAGTTTTATTTTCCTGGCAGATTCCTGTTGTAACATGTTTAAAATTATCGGTGTTTTTTCCTTCTATTTTTCTTCATTACT GATGTGTTTTCCCCCCTTCCTTTTCGACCTATGTAATCACTTCTGGTCTAAAACAAAAGTAAAATAGACTCCACTTCTCTTGTTTTGTGAAGTGAAGGAT TTGTTCTCGTTATATGATAGGGAATTAAAACATCACTAGCTCCATGAAAAACGACCATTCATATGGGAATATAATTAACTAATATATGGTTTTGGAGCCT GTCAGAAATGACTATTTCTGTAAAATTTACCGCTGAGCTTCAGTCTTTCGCACAGAGCACAAGAGTAAAATTTTAGTTTGATGAATGATTGATCTAAAGG AGAATAGACTCTTTGCTCAATTCTGATGTGTTTTTCTGCAATAAGATTTTAGTCGACAGCTTTTCTTCTGGGTTTCATATTTCCATTTTAGAATATGTGA ATTAGTAGGGCAACTCAATACATGAATCTCCAACTCAATGGGGTTTGGGGAGGGTAGATGTACGCAGTATTGCTTCCACAAGTGGACATACTGTTTCCAT GACCTGAACTACGAGTTAAGCAACCTTACCATTTCGTGGAGGTTCATTCCAGATTATTTGAATTAGGGTTGAACTATTATTTCATGGTGCACATATCTTG TTAAAACTGACATTTGTTAGATTCCCATTGCCACTAAATGGTTTTTTTTATCGGCAATGCCTGATTTAGTTTTACCATTCCTTTGGTTTGACTTCAATAA TAATGTATAGGTAATTCTTATTTTATTTAATTGTATTTTCATCTGGTTCTTTGGTATGCTGAATTTTAGTTGTAATTTTAGGCCTTTGAGAGGAAGAGGC AGTAGCAACAGCAGCAGCAGCAGCTCACCACTCCCACCACCTCCACCTCCACCACCTCGCAAGCCGTAGATAGTTTCTGTACCTCTAGTGTCTCATTTTG TTGATGTTTCTGTGAAAAATCTATATCGGTTTATGAGAAGTTATTCTTGCTGCAATGAATGTGCTAGGGGATATATGTTACTTTATCTTGTTGTCTGGAT TCTCAAATACAGTTTATCTTGTAGCACTTTAAAAGAGTTGCTACAAACTTTCTGTTCCATTAATTTGGATTTGTGACCGACTTTAGCTTTGTTATTCTGC TGACATGCAAAATTTGAGAGATATGATGTTTTGATTTCTTGCATCAGGATTAGACTGAATTGAAAAATTGGTTGACACTCTTCACAAATTAATGGAATTG AATTTTCTAAGGATTTAATATGTGTATGATGTAACTGTTTT BLAST
Tissuepods
Gene nameLI_gene_179604; 
Additional informationdetails; 

Expression of Ll_transcript_377488

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_377488

BlastpSerine/arginine-rich splicing factor SR45 from Arabidopsis with 66.29% of identity
BlastxSerine/arginine-rich splicing factor SR45 from Arabidopsis with 77.66% of identity
EggnogRna-binding protein(COG0724)
KeggLink to kegg annotations (AT1G16610)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019443740.1)
PfamRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;