| Id Trinity | TRINITY_DN50749_c0_g2_i10 |
|---|---|
| Name Transcript | Ll_transcript_379771 |
| Sequence | GAGACTTTGAATTTGAATGTACCAAAACAGTAAAATTTCCAAACAAATCATCTATTGATGCCTTCAATTGAGCGACACATTGCTTTCTCGATTTGAATCT CTCACACAAACCTTCACATCTTGATTTTAATATCTTCAATCATTTCCAGAATCGGAAAGAGATTGATTGTTACTGGTTTTTAACAAGTAGCATCACAAGT TGGAATTGAAGAGGTTCAGCTGGGTTGGGTTGAGTAGATGATTGGTTGTGGGGGATTCTGGAGGAAGGTTTTTATGATGAGTTCTGGAGCTACTGAGTTG AATACTTTCTATCCTATTCGACCGGAATGCCAAAGCGATGTTCCACCCACCCGTTTTAAGCCAAGGGCTGGAAAAACTTTAAGTGCAAGAAGATGGCATG CATCATTCTCCGCAGATGGTCGCTTGAATATTGCAAAAGTGCTTAGACGAATCCAGCGGGGGGGTGTCCATCCTTCAATTAAAGGGGTAGTATGGGAGTT CTTGCTAGGTTGCTATGATCCTAACAGTACATTTGATGAACGGAATGAGCTCATGCAACGTCGGAGGGGGCAGTATGATATGTGGAAAGCTGAATGTCAA AAGATGGTTCCAGCCATTGGCAGTGGAAAATTTATTACAACACCCCTTGTCGGTGATGATGGCAAGCCAACAGATCCTTCTTTGATAGGCGTCTCGACTT CAGATAAGAAAGTTTTGCAGTGGATGCAAGTATTACATCAGATTGGTATGCATATGCAGCTGCTCAGATATTGGATACATATTATCGTTCTGACTGATTA TAGTTTTGTTTTACAATTTTTTCTTCTTGGGCTTCACTAAAGGTAAAACTACCTAGGAAGCATCGACTTTGACATGGACGTCGGACAATGCCCAAAATAT AGGACACAACACTATATATAATGTCGAATAAAATTAAATATGAGCAATATGACAAAATCTACATTGAAAGTCAATATTTATACATTGTCCTATGATAATG AGCCTCACGAAAGAATGCTAAAAGGCTTCACTTTACGATGTGAGCATTTTCTTTTCGTAGAAGATTTGAAAACAAGAGATGAAGTTTATCTTTCATATTT AATACCTGTGACATTTCCCCCTTCTTGGTCACCATGATTGAAAATATAGCCTCTAGCTCCAGTACATAACGTGACAAATTAGCAACTTCAACAATCCTCA TTCCTCAAGCTTGGGTCATTTAATGTAAATCTAGGCCTACAGCAACCTTTAAGTTGATTTGAACTAATTAAAATAAGCAATATTATCACTGTGCAAATAT TTTTTGGCCTAATATAAGATGATTTTTTTTCTTGCAAGGAGAGAATATTAGAAATTAATAATATTTTTGGAGGGATTTGGCTAACAATAAGACAATATTT TAGAGAATGTTGGAGAATAAGAATATTGATTGACTATGTAATGGCAATGGCACCATCATAAGTGTGATTAATGAAGAACGTCTTGTTCTTGAGTTGTGAA GGTGATACATCTGTTCCATGATGTTCACAAAACAAGGGCATTGTGTAATACTTACATAAGTTCATGTGGTTTATTAATAATTAATTTGTTTTAATAAGCA TCCATAGTTGCTATTGATCACTTTGCATTGTAGGCCTTGATGTAGTTCGAACAGATCGAGCACTAGAGTTCTACGAGAGTGAAGCCAATCAAGCAAAGCT TTGGGATGTTCTAGCAGTTTTTGCTTGGTTGAACAACGATATTGGTTACGTGCAAGGAATGAATGATATTTGCTCACCTTTGATTATTCTTATTGAGAAT GAAGCTGATTGCTTTTGGTGCTTTGAGCGTGCAATGCGAAGGCTGAGAGAGAATTTCAGGTGCAGTGCAAGTTCAATGGGAGTGCAATCTCAATTGAGTA CACTCTCACAGATAATGAAAACAGTTGATCCCAAACTTCACCAACATCTTGAGGATTTAGATGGTGGAGAGTATCTCTTTGCATTTCGCATGCTGATGGT TCTTTTCCGAAGAGAATTTTCTTTTGCAGATACATTGTATCTTTGGGAGTTGATGTGGGGCATGGAATACAACCCAAACATCTTCTCAAAATACGAGGAT CCGGATCGTACTAAAGCAAAAGAATCTTCATCTGCAATAAATGATAAAATGTTGAAGCAGTATGGAAAATTCGAGAGAAAAAATGTGAAGACGGGGCATA CAGAGGAAAGTTATTCACTTGCTATTTTTCTTGTTGCAAGTGTTCTTGAAATCAAGAATAGACGAATTCTAAACGAAGCAAAAGGCGTCGACGATGTTGT CCAGGTCTCTCTACCGTTCTTTTAAACCCCTCTACGGTTCCAGATATGTTCTTGCGTTTGCGTTTGCGTTTGCGTTGTTTCTGCATATAGCTCACATTAA TCCCTATGCAGATCTTAGGCGACATAACATCAAATCTTGATGCTAAAAAAGCATGTACTGAAGCATTGAAAATTCAGAAAAAGTACCTGAGCAAGGTAGT TTTCATTTTTTATCTTCCCTGGACATGTTTAAGAAAATCAAGGGGATCTTTTCTGGAAAACAAATAATGCAATTGGCATGTATTTGCCAATATTCTTTAT TTTGAAACTCTAATGAACTTCTTTTTCCTCTATTTTTTTCCTTCTCATTACATACATGCTCAATTTCCTCTGCTACTACAGCATTTCTTTTCTTTCAATT TTCACTCCAATCATGTAAATTTTGGTGTTTGTCTTATTGTATTACTTCCATACAAAAAATATGAACTTTTATAGGATTGTTCATGCAGGCTAAGAAGGCA TAACAGTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_179607; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_379771
| Blastp | TBC1 domain family member 15 from Mus with 43% of identity |
|---|---|
| Blastx | TBC1 domain family member 15 from Mus with 42.47% of identity |
| Eggnog | TBC1 domain family member(COG5210) |
| Kegg | Link to kegg annotations (66687) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459238.1) |
| Pfam | Rab-GTPase-TBC domain (PF00566.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |