Ll_transcript_379779

• Id Trinity: TRINITY_DN50749_c0_g2_i17
• Name Transcript: Ll_transcript_379779
• Sequence: GAGACTTTGAATTTGAATGTACCAAAACAGTAAAATTTCCAAACAAATCATCTATTGATGCCTTCAATTGAGCGACACATTGCTTTCTCGATTTGAATCT CTCACACAAACCTTCACATCTTGATTTTAATATCTTCAATCATTTCCAGAATCGGAAAGAGATTGATTGTTACTGGTTTTTAACAAGTAGCATCACAAGT TGGAATTGAAGAGGTTCAGCTGGGTTGGGTTGAGTAGATGATTGGTTGTGGGGGATTCTGGAGGAAGGTTTTTATGATGAGTTCTGGAGCTACTGAGTTG AATACTTTCTATCCTATTCGACCGGAATGCCAAAGCGATGTTCCACCCACCCGTTTTAAGCCAAGGGCTGGAAAAACTTTAAGTGCAAGAAGATGGCATG CATCATTCTCCGCAGATGGTCGCTTGAATATTGCAAAAGTGCTTAGACGAATCCAGCGGGGGGGTGTCCATCCTTCAATTAAAGGGGTAGTATGGGAGTT CTTGCTAGGTTGCTATGATCCTAACAGTACATTTGATGAACGGAATGAGCTCATGCAACGTCGGAGGGGGCAGTATGATATGTGGAAAGCTGAATGTCAA AAGATGGTTCCAGCCATTGGCAGTGGAAAATTTATTACAACACCCCTTGTCGGTGATGATGGCAAGCCAACAGATCCTTCTTTGATAGGCGTCTCGACTT CAGATAAGAAAGTTTTGCAGTGGATGCAAGTATTACATCAGATTGGCCTTGATGTAGTTCGAACAGATCGAGCACTAGAGTTCTACGAGAGTGAAGCCAA TCAAGCAAAGCTTTGGGATGTTCTAGCAGTTTTTGCTTGGTTGAACAACGATATTGGTTACGTGCAAGGAATGAATGATATTTGCTCACCTTTGATTATT CTTATTGAGAATGAAGCTGATTGCTTTTGGTGCTTTGAGCGTGCAATGCGAAGGCTGGTACGCTATATATAATGCAGCTGTGAATTTTCCTAAAAGTGCT AGTTTTAGATGTTTCTTGCATGTGTAATTGATCTTTAGTAACTACAAACTAGTGGCCTCAAGGAATTGGTGACTTTGAAAAAACTGGTCTGAAATTTTGC TAGTAAACATGCTTTGATGTCCATTAAATCATTATTTCTTACCGAGCTTTAATTTTGCTACATTTTTCATGTTAATATTTATATGGTGATGTTATTCTCA CAAGCATATTCTAGCTGTGGAGACTAGAAGAGGCATGGGTCGGAGACCGTCGGAGTTCTCTAGATCTTTCCCCGTGTTGTGCATATATATATTTACCACA CTAGCAGAAATATAGTTACACAAAAGAATTGTTTAACTAAATCATGGAATAGACTCTAGAGTTGGGATTGGAAGTTATTCCTCAAAGAAAAGTAGCACCT TATTTCTTGTTTAAATAGTTAGACACATGGTCTTTTAAGTGCAGAAAATCAATGAATATTACTGCAGCCGAAGAAATACGTACTTACCATTCCCTTTCAT AACAACTGGGCTTATTCTAGCTGTTGCTGTTGCTTTTGTTTTCATTTTAAGACTTAAAAGTGTTTGATCTCAATCACATAATTTTTATGGTGTGTTTACA TTCCTGCCTTTGTTTCCATAACAGAGAGAGAATTTCAGGTGCAGTGCAAGTTCAATGGGAGTGCAATCTCAATTGAGTACACTCTCACAGATAATGAAAA CAGTTGATCCCAAACTTCACCAACATCTTGGTATGTAAAACACACATTACAGAAAAAAACTTCTGTATCGACGTGGAAGCCTCGTGCACTGGACCTCCCT TTGTATCGATGTGGCAGAAAGCAATCCTTAAACTTCATTTCTTTTTTATTTCGCAGAGGATTTAGATGGTGGAGAGTATCTCTTTGCATTTCGCATGCTG ATGGTTCTTTTCCGAAGAGAATTTTCTTTTGCAGATACATTGTATCTTTGGGAGGTAAGGATGGATTCCTATTTTCTCAAGAAATGAACTCTTTTATAAG TTAAGGGGCTACTGTTTTCCGGTTCCTTGACATTTCTTGATGAGGTAGAGTTTCAACTCGGTTTGGCTTCAAATTAATAGCTCATTTTAAGACATAATAT AGATTGTTTCCAGTTGATGTGGGGCATGGAATACAACCCAAACATCTTCTCAAAATACGAGGAGCCAGATCGTACTAAAGCAAAAGAGTCTTCATCTGCA ATAAATGACAAAATGTTGAAGCAATATGGAAAATTTGAGAGAAAAAATGTGAAGACTGGGAATACAGAGGAAAGTTATTCACTTGCTATTTTTCTTGTTG CAAGTGTTCTCGAGATCAAGAATAGACGGATTTTAAACGAAGCCAAGGGTGTCGACGACGTTGTCCAGATCTTAGGCGACATAACGTCAAATCTTGATGC TAAAAAGGCATGCACGGAAGCGTTGAAAATTCAGAAAAAGTACCTAAGCAAGGCAAAGAAGGCATAAAAGTCATAGAAACTGTTAAAATGATCTTCTGAG GTTTCAGTTGCTCCTGACAGAAGCCTATTTTTTTATTTCTTTTATTCATTTTTTCCCTCTTGATGATGGTTAAGTAGTCCCATAATCTATTGTGCTATTG TGTTTGATCATTTGAAAATCAAATGCTAATCTTAGACTTTGAAATATTCTTCAATATCAATTCAATGAATCTTAGACCTCTTATACCTTTGGAAGGATTA CTGCATAAAAAATGTTACTTTTATTAATTATTTGATGATTTGTGCACTGCAGAATTAATTT
• Tissue: pods
• Gene name: LI_gene_179607;
• Additional information: details;

Expression of Ll_transcript_379779

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.3
• PS2: 0
• PS3: 0.4
• PW1: 0.1
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_379779

• Blastp: TBC1 domain family member 15 from Mus with 30.1% of identity
• Blastx: TBC1 domain family member 15 from Mus with 30.1% of identity
• Eggnog: TBC1 domain family member(COG5210)
• Kegg: Link to kegg annotations (66687)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459238.1)
• Pfam: Rab-GTPase-TBC domain (PF00566.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;