Ll_transcript_379573

• Id Trinity: TRINITY_DN50750_c1_g1_i12
• Name Transcript: Ll_transcript_379573
• Sequence: AAATAGTAAGATGTGACTAAGCGATAGGTTATATAATCCCACACGCACCAACAAATCAAAATGAAGAAGAAACTTCACAATTCACACTCACAATTTGTTT AGAAAATAAGTAGGAATATTATTTGATTTTATTTAATTAAATACACAAGCGCGTCCAAAGATAGAATTAGTGAATAACCAACACTTACAAGTATTTCCAT TTTTATCACTATCTGTATTCCAATCTCAACGAAAATATAAAACAAAGCAACCGTCACAGTCTCGATTCGCGACGAATTATGAGCTCCAGCGGCGGCGAAT CAACATCTTCCGACAAGCAAAAGGAGAAGGCTAGGGTGAGCCGCACCTCCTTGATTCTCTGGCACGCGCACCAAAACGACGCCGCTTCGGTGCGTAAGCT ATTGCAAGAGGATCCCTCTCTTGTTAACGCCAGAGATTACGACAACCGTACTCCTCTCCACGTGGCCTCCCTCCACGGCTGGATCGACGTCGCTAACTGC TTAATCGAATTCGGAGCTGACGTCAACGCTCAAGATCGCTGGAAAAACACTCCTCTGGCTGATGCGGAAGGAGCTAAACGAAATAGTATGATTCAGCTTT TGAAAACACACGGAGGCTCGTCTTATGGTCAAAATGGGAGCCATTTCGAACCTAACACAGTTCCTCCGCCATTGCCGAACAAGTGTGATTGGGAAGTTGA CCCGTCTGAGCTTGATTTCTCTAATTCAGCACGTATTGGAAAGGGCTCTTTTGGTGAGATTTTAAAAGCCCATTGGCGTGGAACACCAGTTGCTGTTAAA CGCATTCTTCCCTCTCTTTCAGAAGATAGATTGGTGATTCAGGACTTCAGGCACGAGGTCAATTTGTTAGTGAAGCTTCGACACCCCAACATAGTTCAGT TTCTTGGAGCTGTTACTGACAGAAAGCCACTTATGTTAATTACTGAGTATCTAAGAGGGGGTGACCTTCATCAGTACCTCAAGGAAAAAGGTTCACTTAA TCCTGCAACCGCTATCAACTTTTCCATGGATATTGCCAGAGGAATGGCCTATCTTCATAATGAACCAAATGTTATAATTCATCGAGACCTGAAGCCAAGG AATGTTCTTTTAGTTAATTCTAGTGCTGACCATTTAAAAGTTGGAGATTTTGGATTGAGTAAGCTTATCAAGGTCCAAAGTTCTCATGATGTATACAGGA TGACTGGTGAAACTGGAAGCTGTGAGTATTCTTATAAGTTCTTTTGAAACAACATTAGTCATTTGTATGCAAAGCTCAATTTAATTTTCTTGTTCTTGAG GATACACAAGACCGCTACATGGCCCCTGAAGTTTTCAAACACCGGAGATATGATAAGAAGGTTGATGTATTCTCTTTTGCAATGATTTTGTATGAGATGC TTGAAGGAGAACCACCTTTTGCAAATTTGGAACCTTATGAGGGAGCCAAACGGGCAGCAGAAGGACACAGACCTACTATTCGTGAAAAGGGATATACCCC CGATCTGATAGAGTTAACAGAGCAATGTTGGGCTGCTGACATGACTCAAAGACCTTCCTTCATCGATATCCTTAAACGGCTTGAAAAGATCAAGGAAAAC TTACCATCAGATCATCATTGGCACTTGTTCTCCTCGTAAATGCACCAGAGCATTAGCATGTCCAGAAACTGAGATGATTTATTCGCTGTTACCATTCTGT TGAATTGCATTTTCAACTGCTGCTGGATTTATGGATAGAGCCAATTCGAAAACATGCGAAATCAATATTTGTTTCCAACTGTTTTGCTTCTAATTAGTAG AACAGACGATGTTGATGGCTTTACTTGGTTTCTGCATTCCATCACATTTATCTTATTACAACTCCCATTCCTATCAAATGTAGCATATGCAAATTGTTGC TATCAAGCGTAATACATTTCAACAATGCAAAGTAATTGAGGGAATCGTGTCATCCACTGTTGATGATGCTTCAAGTTACGTTTAAAAAGTTAATGATAGC TTGCATTCTTGGATTTTGTTTTGCCAATTCCCATGCTATATATATATATATGCTAACAACTCTTTTGGTATTAGTGTTACCCTTCTCAAAGGAGTTCCCT TCCCCTGGTTTCACATGAATTCATTATCTTCTGTAAAACAAATGTTACATAATGTGGACTTGGAGAGCAAATTGTCAAGATACCACCAAAATGGAGGGAA AAGAAGACAATGATATTAGTGTCAACCAATGACTCT
• Tissue: pods
• Gene name: LI_gene_179612;
• Additional information: details;

Expression of Ll_transcript_379573

FPKM

• PAB: 0
• PNAB: 1.1
• PS1: 0.7
• PS2: 0.4
• PS3: 1.2
• PW1: 1.1
• PW2: 0.9
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_379573

• Blastp: Dual specificity protein kinase splA from Dictyostelium with 39.7% of identity
• Blastx: Serine/threonine-protein kinase STY8 from Arabidopsis with 30.36% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (DDB_G0283385)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445929.1)
• Pfam: Ankyrin repeats (3 copies) (PF12796.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;