Id Trinity | TRINITY_DN50750_c1_g1_i16 |
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Name Transcript | Ll_transcript_379579 |
Sequence | AAATAGTAAGATGTGACTAAGCGATAGGTTATATAATCCCACACGCACCAACAAATCAAAATGAAGAAGAAACTTCACAATTCACACTCACAATTTGTTT AGAAAATAAGTAGGAATATTATTTGATTTTATTTAATTAAATACACAAGCGCGTCCAAAGATAGAATTAGTGAATAACCAACACTTACAAGTATTTCCAT TTTTATCACTATCTGTATTCCAATCTCAACGAAAATATAAAACAAAGCAACCGTCACAGTCTCGATTCGCGACGAATTATGAGCTCCAGCGGCGGCGAAT CAACATCTTCCGACAAGCAAAAGGAGAAGGCTAGGGTGAGCCGCACCTCCTTGATTCTCTGGCACGCGCACCAAAACGACGCCGCTTCGGTGCGTAAGCT ATTGCAAGAGGATCCCTCTCTTGTTAACGCCAGAGATTACGACAACCGTACTCCTCTCCACGTGGCCTCCCTCCACGGCTGGATCGACGTCGCTAACTGC TTAATCGAATTCGGAGCTGACGTCAACGCTCAAGATCGCTGGAAAAACACTCCTCTGGCTGATGCGGAAGGAGCTAAACGAAATAGTATGATTCAGCTTT TGAAAACACACGGAGGCTCGTCTTATGGTCAAAATGGGAGCCATTTCGAACCTAACACAGTTCCTCCGCCATTGCCGAACAAGTGTGATTGGGAAGTTGA CCCGTCTGAGCTTGATTTCTCTAATTCAGCACGTATTGGAAAGGGCTCTTTTGGTGAGATTTTAAAAGCCCATTGGCGTGGAACACCAGTTGCTGTTAAA CGCATTCTTCCCTCTCTTTCAGAAGATAGATTGGTGATTCAGGACTTCAGGCACGAGGTCAATTTGTTAGTGAAGCTTCGACACCCCAACATAGTTCAGT TTCTTGGAGCTGTTACTGACAGAAAGCCACTTATGTTAATTACTGAGTATCTAAGAGGGGGTGACCTTCATCAGTACCTCAAGGAAAAAGGTTCACTTAA TCCTGCAACCGCTATCAACTTTTCCATGGATATTGCCAGAGGAATGGCCTATCTTCATAATGAACCAAATGTTATTATTCATCGAGACCTAAAGCCAAGG TATGCATATATGAAAGCATAAATTTGGGTTAGCTGCAACAGGCAGCATATCATCATGCATTACTTATAACAATTTGAACCAAAGTTTGCTTTTATCCTAG ATTTACAAGATTTTATGTCATCAAGAACATGCAACTAGAATTTAGAAGTCTTTGTATTAAATGTTGAAGTTTATTTTCTAAAATTTTAGGAATGTTCTTT TAGTCAATTCTAGTGCCGACCATTTAAAGGTTGGAGATTTTGGATTGAGTAAGCTTATCAAGGTCCAAAGTTCTCATGATGTATACAAGATGACTGGTGA AACTGGAAGCTATCGCTACATGGCTCCTGAAGTTTTCAAGCACCGGAGATATGATAAGAAGGTTGACGTGTTCTCTTTTGCGATGATTCTATATGAGATG CTTGAAGGTGAACCACCTTTTGCAAATTATGAACCTCTTGATGGAGCCAAACGGGCAGCAGAAGGACACAGGCCTACTATACGTGCAAAGGGATACACCC CTGAACTGATAGAGTAAGTCATTTATGATGGCTTTTTTAGGCAATTTAATTGCATGTTATTAAGAGAGTTGATTTTTAACATGTGAGTTCCTCTTTGACC AAATAACAGTTATTGTTGTTATCTTCAAGTGGATTTATTCTTTCTCCACACTTCTAGCCCAAAAGGCTTTCACATGACAGGGCATGTGAGATATAGATCA TTGTATAGCTTGCACATGATAGTTGAAGCTTTCAAGACACTAGGCCCTTTAGGATACTAAATTAAAATACTAAATGGAAGTTACAAGTTTTCTATTGAAC TTATGTGAATTATTTTGTTTAGTTTCACTTCTAGACTAACTTAAGAAAAGGAAAGTTGATGTCTTAAAAGACATACTACCAGAAGTCCACCTATTTAGCT GTATCTTGTACAAGTACTTATCAAGATGCTTCCAATGGTAAAGATATTCCAGTTGGAGCATGTAGTCCTACTATTAATTACATCCTCAATATTTTAAGTC TGTCCTCCTAATTTGTCTAAATATCTGACATTAGGATCGATTTCATGTCTGTACCTTATAAAATCATTTGGTTTGATTTAAGCTCTTCAACTGTATATGC TCTGGTGTGTGCTTAATGCTCAGTGATATCTGGGCCATGCTGTGCCGTTGCTAATATTACTATTGTATATTGCCCCCAAATCACAAAAAGCATCTCACTC TGTCTCTTCTAATTTTACACCGATCCAGCTTGTATAATCTTTTTATGTATTGGCAGTATGCTTTTAATCTCTGATAGTTTGATTCATTATGCCATACTAT AAATAACCTGATGGAATGATTAAGGTTATGATTTACCCTCCTTCGTCATAGTTCAAGAACATCCAAAAGCTATACGGTTACCTTTGGTATTTCCAATTTC ACAAACCCCAAGTATGATTTGCATAAATGTGATATAAACCTTCTGGCCATTTAGTTAGAGGTTCTGAAATGCTTTGCAAATTAGGCTATTAAAAGTTACA GTTAGTAGTTTATTTTGTTTACTTCAACTATTCAATATATCAGCCACCAGGAGTTGTCTCACCTAATCAAACTTTTGCCTGTGACAATTACACGACTTAG GATTGAATTCAGGGTTTTCCTTTAAGTAAGCAATTTGTAATTTGGGGTTCCACTTAACCTCTTTGATGTTGGTGTTTTGTGCTACTTTTAGAATAAAGAG ATCATCACCTCACTCTTAAGCTCTTAATTCAAAAAATCAGTTTTTGGCTTTTTTTAGTCATAGGTAATATCACGAACTTTGACCTGGTATGTTCTTAGGT TAACAGAGCAGTGTTGGGCTGCTGACATGAATCAAAGACCTTCCTTCATAGACATCCTTAAACGGCTTGAAAAGATAAAGGAAAATTTACCATCAGATCA TCACTGGCACTTGTTCTCTTCGTAAATGCATAAGAGCATTAACATGTCCAGAAATTCAGATGATTTATTTCCTATTACCATTCCGGTGGTTTGCCTTCTC TACTGGTGCTGGATTTATGGATCGAGCCAACTGGAAAACCTGCCAAGTCAAAATTTGTTCAAACTGTTTGGCTTCTAAATTTTTATTAGCAGGACATGCA ATGTTGATAGCTTTTCTTTGGTTTCTGCATTCCATTCCATTCCATTTTATCTCATTAAAGCTCCCATTCCACTTGAGCATACGCAGATTGTTGTGTAAGT GTAATACATTTTAACTGTACAAAGTAATTGACGAAAATAGGGTATACATCATAACATCCACTGTTTGATGATGCTGCATGTTTTGTTTAAAAATTTAATA AATAGTTTGCATTCTTGGATTTTGTTTTACCATTTCATGTCCTATATAGATGCTAGCAACTCTTTTGGTTTTCCCATTTCCCAGCTCCAGTCCCCTCTCT GCCTAAGTTAAAT BLAST |
Tissue | pods |
Gene name | LI_gene_179612; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_379579
Blastp | Serine/threonine-protein kinase TNNI3K from Pongo with 30.47% of identity |
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Blastx | Serine/threonine-protein kinase TNNI3K from Pongo with 29.79% of identity |
Eggnog | Ankyrin Repeat(COG0666) |
Kegg | Link to kegg annotations (100174232) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445929.1) |
Pfam | Ankyrin repeats (3 copies) (PF12796.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |