Ll_transcript_379560

• Id Trinity: TRINITY_DN50750_c1_g1_i2
• Name Transcript: Ll_transcript_379560
• Sequence: GGGTAATCAATAGTGTTAACCAAACGAATCATGTAAAGAGAATAAGAGAAGAAGCGGCAGTTAAAACCATTTACATTTTGATCAATTTCCCTCTTCCATT CACACTCCAATCTCCAACCGCAGCAACCGTCACAGTCTCCATCGACGCCGCATTATGAGCTCCAGCGGCGGCGAATCATCAACTTCCGACAAACAAAAGG AGAAAGCTAGGGTGAGCCGCACCTCCTTGATTCTCTGGCATGCTCACCAAAACGACGCCGCTTCCGTGCGCAAGCTCTTACAAGACGATCCCTCTCTTGT CAACGCCAGAGATTACGACAACCGTACTCCGCTCCACGTCGCTTCCCTCCACGGCTGGCTCGGCGTCGCTAACTGCTTAATTGAATTCGGTGCTGACGTC AACGCCCAAGATCGTTGGAAAAACACTCCTCTGGCTGATGCGGAAGGAGCTAAACAGAATAGCATGATCCAGCTTTTGAAAACACACGGAGGCTCGTCAT ATGGCCAAAATGGGAGCCATTTCGAACCAAACACGGTTCCTCCCCCGTTGCCTAACAAGTGTGATTGGGAAGTTGATCCTTCAGAGCTTGACTTCTCTAA TTCAGCACGTATTGGAAAGGGCTCTTTTGGAGAGATTTTGAAAGCCCATTGGCGTGGAACACCGGTTGCTGTCAAACGTATTCTTCCTTCCCTTTCAGAA GATAGATTGGTGATTCAGGACTTCAGGCATGAGGTCAATTTGTTAGTAAAGCTTCGACACCCCAATATAGTTCAGTTTCGTGGAGCTGTTACTGATAGGA AGCCGCTTATGTTAATTACCGAGTATCTAAGAGGGGGTGATCTTCATCAGTACCTCAAAGAAAAGGGTTCACTGAATCCTGCATCCGCTATAAATTTTTC CATGGATATTGCCAGAGGAATGGCATATCTTCATAATGAACCCAATGTTATAATCCATCGAGACCTAAAGCCAAGGAATGTGCTTTTAGTCAATTCTAGT GCCGACCATTTAAAAGTTGGAGATTTTGGATTGAGTAAGCTTATCAAGGTCCAAAGTTCTCATGATGTATACAAGATGACGGGTGAAACAGGAAGCTACC GCTACATGGCTCCTGAAGTTTTCAAGCACCGGAGATATGATAAGAAGGTTGATGTATTCTCTTTTGCAATGATTTTGTATGAGATGCTTGAAGGTGAACC ACCTTTTGCAACTTATGAACCTTATGATGGAGCCAAACGGGCAGCAGAAGGACACAGGCCTACTATCCGGGCAAAGGGATATACCCCTGAACTGATAGAG TATGTCATTTATGTTATGTTTCTTTTACACAATCACTAGCATGTTATTAGGAGATTTGGTTTTTAACATCATGTGAGTAAGTGTTTGACCAAGTGTGGTG AAGAGTTTTCTCTATTGTCTTGTTGTAGTAGGATTTATGGTTTCTTAATGCTTCTAGCCTAAAAAACTTTCACATGACAGGACATGATTGAGGTATAAAT AATAGATCATTTCTAGGCTTGCACATAATATTTGAAGCTCTCAAGATGTTAGGCCCTTTAAGATATTAAATTAAACTACTAAACGGAAGCCACGAGTTTA GTGGATTAAACTTGTGTGAATAATGTTTAATTTCACTTCTAGAGTAACTTATGAAAAGGAAAGTTGATGTCTTAAAAGATGTAGTACCAGAAATCCACCT ATTTAGCTGTGTGATTGATTTCATTTCTTTGCCTTCTTACAAAATCATTTGGTTTGATTTAAGCTTTGCAACTGTATATGCTCTGGTGTGTGTTTAAATG CTCAGTGATATCCGCCATGATGTGCCATTGCTAATCTTACTAATTACTATTGTATATTGCCCTCAAACCACAAAAACATCCCACTTTGTTGTCTCTTCTT TTAATTTTATCCTGATCCAGCTTCTATAACCTGGTGGAATGGTAAATAATAGTTATGATTTACCCTCCTTCATCATGCTTGAAGAACATCTACAGAAGCT ATATCATTGCTCTTGGTACTATACCTGGTATTTCCAATTTCACAAAACCCAAGTATGAGTAGCATAAATATGATATAAATTTGTGACCAATTAATTAGAG ATTCTGAAATGCGTTGCAAATTAGGCTGTTAGAAGTTACAGTTAGTAATTTATTTTGTTTACATCACCTAATCAAACTTTTGTCTGTGACAACTGTGTGA CTTAGAATTGAATTCAGGCCTTCAGGGTTCTCCTTTTAGTAGGAAATTTGTAATTTGTAATTCCGCTGTAAATCCTCTTCGATACTGGTGGTTTGTGATG TCCTTAGAAAGAGGAAATCGTTCCCTCACTCTCAAGCTTTTAATTAAAAAGAAGAAGCAGTTTTTGGCCTTTTTAATCATAATATGAGTAATCTCACGAA TTTTGACCTTGTATGTTCTTAGGTTAACAGAGCAGTGTTGGGCTGCTGACATGAATCAAAGACCTTCCTTCATAGATATACTTAAACGGCTTGAAAAGAT CAAGGAAAACTTGCCATCAGATCATCACTGGCACTTGTTTTCTTCATAAATGCGTAAGAGCATTGACACGTCCAGAAATTCAGATGATTTATTGGCTATT ACCATTCCGGTGCTCTGGTTCTCTACTGCTGCTGGATTTATGGATAGGCTAACTGGAAAACCTGCAAAGTCAATACTTGTTTCCAATTGTTTGGCTTCTA ATTAGTAGAACAAGCTATGTTGATGGCTTTTATTTGGTTTCTGAATTCCATTACATTTTATCTGATTAAAACTCCCATTCCATTCAAGTGGAGTATATGC AAATTGTTGCTTTAAGTGTAATACATTATTACATTTGAACTGTACAAAGTAATTGAGGAAGATAGGGTACATCATGTCATACGCTGTTTGATGATGTTTC ATATTTCGTTTAGAAAATGAATAATAGTTTGCATTCTTG
• Tissue: pods
• Gene name: LI_gene_179612;
• Additional information: details;

Expression of Ll_transcript_379560

FPKM

• PAB: 7.6
• PNAB: 2.2
• PS1: 2.4
• PS2: 1.8
• PS3: 2.6
• PW1: 2.1
• PW2: 3.7
• PW3: 3.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_379560

• Blastp: Serine/threonine-protein kinase STY17 from Arabidopsis with 32.71% of identity
• Blastx: Serine/threonine-protein kinase STY17 from Arabidopsis with 32.71% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT4G35780)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445929.1)
• Pfam: Ankyrin repeat (PF00023.29)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;