Ll_transcript_379561

• Id Trinity: TRINITY_DN50750_c1_g1_i3
• Name Transcript: Ll_transcript_379561
• Sequence: AAATAGTAAGATGTGACTAAGCGATAGGTTATATAATCCCACACGCACCAACAAATCAAAATGAAGAAGAAACTTCACAATTCACACTCACAATTTGTTT AGAAAATAAGTAGGAATATTATTTGATTTTATTTAATTAAATACACAAGCGCGTCCAAAGATAGAATTAGTGAATAACCAACACTTACAAGTATTTCCAT TTTTATCACTATCTGTATTCCAATCTCAACGAAAATATAAAACAAAGCAACCGTCACAGTCTCGATTCGCGACGAATTATGAGCTCCAGCGGCGGCGAAT CAACATCTTCCGACAAGCAAAAGGAGAAGGCTAGGGTGAGCCGCACCTCCTTGATTCTCTGGCACGCGCACCAAAACGACGCCGCTTCGGTGCGTAAGCT ATTGCAAGAGGATCCCTCTCTTGTTAACGCCAGAGATTACGACAACCGTACTCCTCTCCACGTGGCCTCCCTCCACGGCTGGATCGACGTCGCTAACTGC TTAATCGAATTCGGAGCTGACGTCAACGCTCAAGATCGCTGGAAAAACACTCCTCTGGCTGATGCGGAAGGAGCTAAACGAAATAGTATGATTCAGCTTT TGAAAACACACGGAGGCTCGTCTTATGGTCAAAATGGGAGCCATTTCGAACCTAACACAGTTCCTCCGCCATTGCCGAACAAGTGTGATTGGGAAGTTGA CCCGTCTGAGCTTGATTTCTCTAATTCAGCACGTATTGGAAAGGGCTCTTTTGGTGAGATTTTAAAAGCCCATTGGCGTGGAACACCAGTTGCTGTTAAA CGCATTCTTCCCTCTCTTTCAGAAGATAGATTGGTGATTCAGGACTTCAGGCACGAGGTCAATTTGTTAGTGAAGCTTCGACACCCCAACATAGTTCAGT TTCTTGGAGCTGTTACTGACAGAAAGCCACTTATGTTAATTACTGAGTATCTAAGAGGGGGTGACCTTCATCAGTACCTCAAGGAAAAAGGTTCACTTAA TCCTGCAACCGCTATCAACTTTTCCATGGATATTGCCAGAGGAATGGCCTATCTTCATAATGAACCAAATGTTATAATTCATCGAGACCTGAAGCCAAGG AATGTTCTTTTAGTTAATTCTAGTGCTGACCATTTAAAAGTTGGAGATTTTGGATTGAGTAAGCTTATCAAGGTCCAAAGTTCTCATGATGTATACAGGA TGACTGGTGAAACTGGAAGCTACCGCTACATGGCCCCTGAAGTTTTCAAACACCGGAGATATGATAAGAAGGTTGATGTATTCTCTTTTGCAATGATTTT GTATGAGATGCTTGAAGGTGAACCACCTTTTGCAACTTATGAACCTTATGATGGAGCCAAACGGGCAGCAGAAGGACACAGGCCTACTATCCGGGCAAAG GGATATACCCCTGAACTGATAGAGTATGTCATTTATGTTATGTTTCTTTTACACAATCACTAGCATGTTATTAGGAGATTTGGTTTTTAACATCATGTGA GTAAGTGTTTGACCAAGTGTGGTGAAGAGTTTTCTCTATTGTCTTGTTGTAGTAGGATTTATGGTTTCTTAATGCTTCTAGCCTAAAAAACTTTCACATG ACAGGACATGATTGAGGTATAAATAATAGATCATTTCTAGGCTTGCACATAATATTTGAAGCTCTCAAGATGTTAGGCCCTTTAAGATATTAAATTAAAC TACTAAACGGAAGCCACGAGTTTAGTGGATTAAACTTGTGTGAATAATGTTTAATTTCACTTCTAGAGTAACTTATGAAAAGGAAAGTTGATGTCTTAAA AGATGTAGTACCAGAAATCCACCTATTTAGCTGTGTGATTGATTTCATTTCTTTGCCTTCTTACAAAATCATTTGGTTTGATTTAAGCTTTGCAACTGTA TATGCTCTGGTGTGTGTTTAAATGCTCAGTGATATCCGCCATGATGTGCCATTGCTAATCTTACTAATTACTATTGTATATTGCCCTCAAACCACAAAAA CATCCCACTTTGTTGTCTCTTCTTTTAATTTTATCCTGATCCAGCTTCTATAACCTGGTGGAATGGTAAATAATAGTTATGATTTACCCTCCTTCATCAT GCTTGAAGAACATCTACAGAAGCTATATCATTGCTCTTGGTACTATACCTGGTATTTCCAATTTCACAAAACCCAAGTATGAGTAGCATAAATATGATAT AAATTTGTGACCAATTAATTAGAGATTCTGAAATGCGTTGCAAATTAGGCTGTTAGAAGTTACAGTTAGTAATTTATTTTGTTTACATCACCTAATCAAA CTTTTGTCTGTGACAACTGTGTGACTTAGAATTGAATTCAGGCCTTCAGGGTTCTCCTTTTAGTAGGAAATTTGTAATTTGTAATTCCGCTGTAAATCCT CTTCGATACTGGTGGTTTGTGATGTCCTTAGAAAGAGGAAATCGTTCCCTCACTCTCAAGCTTTTAATTAAAAAGAAGAAGCAGTTTTTGGCCTTTTTAA TCATAATATGAGTAATCTCACGAATTTTGACCTTGTATGTTCTTAGGTTAACAGAGCAGTGTTGGGCTGCTGACATGAATCAAAGACCTTCCTTCATAGA CATCCTTAAACGGCTTGAAAAGATAAAGGAAAATTTACCATCAGATCATCACTGGCACTTGTTCTCTTCGTAAATGCATAAGAGCATTAACATGTCCAGA AATTCAGATGATTTATTTCCTATTACCATTCCGGTGGTTTGCCTTCTCTACTGGTGCTGGATTTATGGATCGAGCCAACTGGAAAACCTGCCAAGTCAAA ATTTGTTCAAACTGTTTGGCTTCTAAATTTTTATTAGCAGGACATGCAATGTTGATAGCTTTTCTTTGGTTTCTGCATTCCATTCCATTCCATTTTATCT CATTAAAGCTCCCATTCCACTTGAGCATACGCAGATTGTTGTGTAAGTGTAATACATTTTAACTGTACAAAGTAATTGACGAAAATAGGGTATACATCAT AACATCCACTGTTTGATGATGCTGCATGTTTTGTTTAAAAATTTAATAAATAGTTTGCATTCTTGGATTTTGTTTTACCATTTCATGTCCTATATAGATG CTAGCAACTCTTTTGGTTTTCCCATTTCCCAGCTCCAGTCCCCTCTCTGCCTAAGTTAAAT
• Tissue: pods
• Gene name: LI_gene_179612;
• Additional information: details;

Expression of Ll_transcript_379561

FPKM

• PAB: 18.6
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.4
• PW2: 1.8
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_379561

• Blastp: Serine/threonine-protein kinase STY46 from Arabidopsis with 38.29% of identity
• Blastx: Serine/threonine-protein kinase STY46 from Arabidopsis with 38.29% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT4G38470)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445929.1)
• Pfam: Ankyrin repeats (3 copies) (PF12796.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;