Ll_transcript_379563

• Id Trinity: TRINITY_DN50750_c1_g1_i5
• Name Transcript: Ll_transcript_379563
• Sequence: CACACTTTCTCTTGACAGTTGATAGTTCAAAAAAAAAATCTGGCACTCCCAATTTGTGTGGCATAAGTAAATGGCAACATTATTTCATTATACTTATGTA ATTAGCATAAGAGCCACTTGAACCATTTCCATTTTTATCAACTTCTTCATTTCTCACATTCCACTTTCCACTATTTCACATTCCAGAAATAGAAATCAAC CGCAGCAACCGTCACACAATGAGCTCCAGCGGCGGCGGCGAATCATTATCTTCCGACAAGCAAAAGGAGAAAGCTAGGGTGAGCCGCACCTCCTTGATAC TGTGGCACGCTCACCAAAACGACGCCTCTTCTGTCCGCAAACTCTTACAAGAAGATCCATCTCTTGTTAACGCCACAGATTACGATAACCGAACGCCGCT CCACGTCGCCTCCCTCCACGGCTGGCTCGACGTCGCTAACTGCTTAATCCAATTCGGCGCTGACGTCAACGCTCAAGATCGTTGGAAAAACACTCCTCTT GCTGATGCTGAAGGAGCTAAGAAAAATAGCGTGATCCAGCTTTTGAAAAAACACGGAGGCTCGTCTTATGGTCAAAATGGGAGCCATTTCGAACCCAACA CTGTTCCGCCCCCGTTGCCTAACAAGTGTGATTGGGAAGTTGATCCTTCAGAGCTTGACTTCTCTAATTCAGCACGTATTGGAAAGGGATCTTTCGGCGA GATTTTAAAAGCCCATTGGCGTGGAACTCCAGTTGCTGTCAAGCGCATTCTTCCCTCTCTTTCAGAAGATAGATTGGTGATTCAGGACTTCAGGCATGAG GTCAATTTGTTAGTAAAGCTTCGACACCCCAATATAGTTCAGTTTCGTGGAGCTGTTACTGATAGGAAGCCGCTTATGTTAATTACCGAGTATCTAAGAG GGGGTGATCTTCATCAGTACCTCAAAGATAAAGGTTCACTTAATACCGCATCTGCTATCAACTTTTCCATGGATATTGCCAGAGGAATGGCCTATCTTCA TAATGAACCAAATGTTATTATTCATCGAGACCTAAAGCCAAGGTATGCATATATGAAAGCATAAATTTGGGTTAGCTGCAACAGGCAGCATATCATCATG CATTACTTATAACAATTTGAACCAAAGTTTGCTTTTATCCTAGATTTACAAGATTTTATGTCATCAAGAACATGCAACTAGAATTTAGAAGTCTTTGTAT TAAATGTTGAAGTTTATTTTCTAAAATTTTAGGAATGTTCTTTTAGTCAATTCTAGTGCCGACCATTTAAAGGTTGGAGATTTTGGATTGAGTAAGCTTA TCAAGGTCCAAAGTTCTCATGATGTATACAAGATGACTGGTGAAACTGGAAGCTATCGCTACATGGCTCCTGAAGTTTTCAAGCACCGGAGATATGATAA GAAGGTTGACGTGTTCTCTTTTGCGATGATTCTATATGAGATGCTTGAAGGTGAACCACCTTTTGCAAATTATGAACCTCTTGATGGAGCCAAACGGGCA GCAGAAGGACACAGGCCTACTATACGTGCAAAGGGATACACCCCTGAACTGATAGAGTAAGTCATTTATGATGGCTTTTTTAGGCAATTTAATTGCATGT TATTAAGAGAGTTGATTTTTAACATGTGAGTTCCTCTTTGACCAAATAACAGTTATTGTTGTTATCTTCAAGTGGATTTATTCTTTCTCCACACTTCTAG CCCAAAAGGCTTTCACATGACAGGGCATGTGAGATATAGATCATTGTATAGCTTGCACATGATAGTTGAAGCTTTCAAGACACTAGGCCCTTTAGGATAC TAAATTAAAATACTAAATGGAAGTTACAAGTTTTCTATTGAACTTATGTGAATTATTTTGTTTAGTTTCACTTCTAGACTAACTTAAGAAAAGGAAAGTT GATGTCTTAAAAGACATACTACCAGAAGTCCACCTATTTAGCTGTATCTTGTACAAGTACTTATCAAGATGCTTCCAATGGTAAAGATATTCCAGTTGGA GCATGTAGTCCTACTATTAATTACATCCTCAATATTTTAAGTCTGTCCTCCTAATTTGTCTAAATATCTGACATTAGGATCGATTTCATGTCTGTACCTT ATAAAATCATTTGGTTTGATTTAAGCTCTTCAACTGTATATGCTCTGGTGTGTGCTTAATGCTCAGTGATATCTGGGCCATGCTGTGCCGTTGCTAATAT TACTATTGTATATTGCCCCCAAATCACAAAAAGCATCTCACTCTGTCTCTTCTAATTTTACACCGATCCAGCTTGTATAATCTTTTTATGTATTGGCAGT ATGCTTTTAATCTCTGATAGTTTGATTCATTATGCCATACTATAAATAACCTGATGGAATGATTAAGGTTATGATTTACCCTCCTTCGTCATAGTTCAAG AACATCCAAAAGCTATACGGTTACCTTTGGTATTTCCAATTTCACAAACCCCAAGTATGATTTGCATAAATGTGATATAAACCTTCTGGCCATTTAGTTA GAGGTTCTGAAATGCTTTGCAAATTAGGCTATTAAAAGTTACAGTTAGTAGTTTATTTTGTTTACTTCAACTATTCAATATATCAGCCACCAGGAGTTGT CTCACCTAATCAAACTTTTGCCTGTGACAATTACACGACTTAGGATTGAATTCAGGGTTTTCCTTTAAGTAAGCAATTTGTAATTTGGGGTTCCACTTAA CCTCTTTGATGTTGGTGTTTTGTGCTACTTTTAGAATAAAGAGATCATCACCTCACTCTTAAGCTCTTAATTCAAAAAATCAGTTTTTGGCTTTTTTTAG TCATAGGTAATATCACGAACTTTGACCTGGTATGTTCTTAGGTTAACAGAGC
• Tissue: pods
• Gene name: LI_gene_179612;
• Additional information: details;

Expression of Ll_transcript_379563

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.2
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_379563

• Blastp: Probable serine/threonine-protein kinase drkD from Dictyostelium with 45.26% of identity
• Blastx: Probable serine/threonine-protein kinase drkD from Dictyostelium with 45.26% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (DDB_G0281557)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432157.1)
• Pfam: Ankyrin repeats (3 copies) (PF12796.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;