Ll_transcript_377782

• Id Trinity: TRINITY_DN50751_c2_g2_i12
• Name Transcript: Ll_transcript_377782
• Sequence: CTGCAACATTCCCTTTCTATAAACAGTCTTTCTACTCTACGCCGTGGGCTCAAAGAACAAACACCCTTTTTATAAACTTCCACAAACTTAGGATTCACAA GTATCAGCGCACGTTAGAACAACCCAATGACAACATCATCAACCGGGTCGGGTTGTATATTATGGTTTCGAAAGGGTCTTCGGATCCATCACAACCCGGC TCTTCAATTCGCTTCCCAAAATGGGGTTTCTAATCTTTACCCACTTTTTGTTATCGACCCCAATTACATCAAACCCGACCCGAATTCATTCTCTCCCGGG TCGACCCGGTCGGGTCTTAACCGAATCAAGTTCTTACTTCAGAGCCTTGTGGACCTTGATTTCAATCTTAACAAACTTGGCTCGCGTCTTCTTATTCTTA AGGGTGATCCTGTAAAGGTTCTTATTCGTTGCTTCAAAGAGTGGAATATCAGAAAGCTATGCTTTGAGTTTGACACTGAACCATATTATCAGGCTCTGGA TATTGAAGTTAAGAACTTTGCACTGGCAGAGGGAATTGAGGTTTTCTCCCCTGTAAGTCACACACTCTTCAACCCCAAGGATATTATAGAGAAGAATGGA GGAAAGCCGCCCCTTAGTTATCAATCATTTATCAAGCTTGCCGGGGAGCCGCTACCCCCTCTCCCAACCAAGCACTCTTCACTTCCTCCAGTTGGCCATC TTGGAACTTGTGATGTTTTTGAAGTTCCATCGATCAAAGATCTTGGATATGAAGACGCTAAACAGGATGAGTTCTCTCCTTTCAAAGGCGGTGAATCAGA AGCGTTGAAGAGGTTGGCAGAGTGTATGAAAGACAAGGTGTGGGTGGCAAACTTTGAGAAACCCAATGGTAATCCATCTGCATTTCTTAAGCCAGCAACA ACTGTTTTATCACCTTACTTGAAATTTGGTTGTCTCTCTTCCAGTTATTTCTACCAGCAAATTCAGGATGTATATAAAACTATGCCTAAGCATACATCAC CACCTGTTTCTCTTCTAGGACAGTTGTTGTGGCGAGACTTCTTTTACACGGCAGCTTTTGGGACTCCGAACTTCGATAGAATGAAAGGCAATAGGATATG CAAGCAAATTCCGTGGAAGGATGATGATAAATTGCTGGAGGCTTGGAGGGAGGCTAGGACAGGATTTCCTTGGATTGATGCTATCATGGTCCAGGTTTGG GTTCTAAAATCGTTTTTTCCTCCAAATGAAGCAATAACCAATAGTTGTATTACTTTGAAGCTGCATAGGTGCTCAAATCTAGTCCACCACAATATTTTCA TTAGCCTTCTCAGGAAGTGCATTTGAATCTGTAATTTTCGGTTGTAGCTACGCAAGTGGGGTTGGATACATCATCTGGCACGGCACTCTGTTGCGTGCTT TCTAACTCGAGGTGATCTGGTATATGTCTTCGATACTTTAAGCATGTCAAACTTTTTATATGCTGCCACTCTTTACCAACGTTGTTTGCTTATGCTCACA GTTTGTTCATTGGGAAAAAGGACGTGATGTTTTTGAGCGACTTCTGATTGATTCAGATTGGGCCATTAACAATGGAAACTGGTTGTGGCTCTCATGTTCA TCCTTCTTTTATCAGTACCATCGTATTTATTCCCCAATTACATTTGGCAAGAAGTATGACCCTAATGGTGACTACATTAGGCATTTTCTCCCGGTCTTAA AAGATATGCCCAAGGAGTACATTTATGAACCATGGACTGCTCCTCTAAGCATCCAGACCAAAGCAAAATGCATAATTGGCAAAGACTATCCGATGCCAGG TCAGTTTCGTAATTTAGGGCACGTCCTTTTATAGAGCTTTCAGCATTTGGTAATTTGTATCCTCCTGTGTTCTTCAATCCATATAATTGGGTTTCTTTGA GTTTGTATTTAAAGTCTGTTGTGAACTATTTTGGTTGTAAATTGTGGTTACGAACTTACTTATGTTGTGATGCAATACCGATTGTCATTATCACGATGTG GTTTGCCGCTGTTACAGTTTGAATCTGTTGTGGCATGATGCGGTCCAATGCAATTGAATTACTATGATTCAGATCAGAATCATGTCTTAATTTGTGGGGT CATGTGTTCACTACATTGAAAGATTTGTTTTGTTTTATGTTCTAAAACTATTTGCATGTCTAAATTCAACATGTATTGGTTTGTAAGGGACTTTCTTATA TATGCTCTATAAGTTGTGTTTCAGTTGTTTCCCATGATTCTGCAAGTAAAGAATGCCGACGGAAAATGCGCGAAGCATACGCGATGAACAAAGAATTGAA GGGTTTGGTTAGTGAGGATGATCTGAAGAAGTTAAGAAGAAAATTAGATGAAAGTGTAGAGCAAGGGGGAAAAGCTAAAAGATCAAGACAATAAGTGATT GTGGGTGAGAGATAAATTTGCTGGTTTTTTTCCTCATACTACCATGCTTTATATTAGGCATTACCTTTTGTATCACACTATCTATCATGTAGTATATATT TTTTATATATATATTACTTTCGGGGTATATCATTTTCGGGGTACATGGAACCATAAACTACTAGACCAACACATTCCAGAACTCGATTATTTTATTAGAA GATAATTTAAAAAATATATATTACCATATGTGTATTGGACCGAATTGGCCTGCATGGATATATGAGATTTCAAATATGCCAAATTGTCTCAAGCAATTAT TATTTGCATGTAGAAGCAATTAATTAATTAATTTGGTTAAAAAGTTATCTTTTTTTTTTAAATTACAAATTCATAGGCTGTAACCCCATCATTAGTAGAT TTAAAGAATGAAATAATCTTTAAGTTTTAGATCAGTAAAATGCTTTAAACCAAGGATTTTATATGTGTGAACTGATAGTGTAAGTGTTTTTTATACTGTT AGCAAATCATTCACCATTGATTTGTTAACCATGATTGAACGTCTAACAAAAGTAATACAAACCAAACGGTTATGAAAAACTTTACAATATTGTACAAATT TTAAATTCTTAAAACCAGTAACCATGAAGAATGATATTGTCTAGTGGTTTAGCACATTGGATTTGATTTCACTAAAACCACACACATTAAATGACATGGT TCAAGAATAAAGAATGTATTGCAAAACAAAATAGAAATGTATTGAAAATAGTGGAAATGTTTCTTTTAACAAAATATATTTATTATTTTCTTGTCCAGCC CTAATTTTAAAGATTTGTATGAAAATAGTGAAAGTAAAAAATAAAGTGATTTTATAAGAAGAAAAGAAAATTGATATATTTATGAAATCTATTGTTGTGT TGTATCATTGAAAAACAACAAAGAACCCTATCACTCTATCTCATTTCTGAGTTTGAAAACGACACCGTTCGCAACATCGTTGGGCGTGACCTGAGAACAA TCATGTATCGTAGACTTCTCTCTTCTCACCTCAAAACCCTAACTTCTCTCTCTCCGGCCCGATCTGCTTCCTCCGCCGCCATCGCCGCCGCCGCTCCTCC CGCACTCTCTTCCCTCTCCCGCCGCCACTTTTCCGATGACACGAGTGCGGTAAAAAAGAAGGTTGAAGATGTTGTGCCAATCGCTACTGGTCACGAGCGT GAGGAAATTCAAGCTCAACTTGAGGGAAGGGATATTCTTGAAATAGACCACCCTGAAGGTCCTTTTGGCACAAAGGAAGAACCTGCAGTTGTCAAATCTT ACTATGATAAAAGAATAGTCGGGTGCCCAGGAGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAACCTCATGAATGTCC AGTGTGCTCACAGTATTTTGTGCTTGAAGTAGTGGGACCTGGTGGATCACCCTATGGACATGGCGACGGCGACGAAGATCATCACCATTGATTGCATGCT TCAAATTTCCTTCCGGAATAAGTTCAGGAAAGATAGAAACATTGTTTAGCAAACATAAGTCCTTTCAAAGCCTGTGTTTGGTTTTGATTTATAATATTTT GTGTTGTTGCAACTTTGAAGGTACAGTTTCTGTGATTATTAGACACATGTTGCTCATTTGCTTGAGGTATCAGATTCTTGTATTATGTTTTGTGCACTGT GAAATAATTGATAACCACTTGATGATTCTTTGACATTAATATATCTGTTTAAATAGAACCTTAA
• Tissue: pods
• Gene name: LI_gene_179622;
• Additional information: details;

Expression of Ll_transcript_377782

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0
• PS2: 0
• PS3: 0.2
• PW1: 0.1
• PW2: 0.1
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_377782

• Blastp: (6-4)DNA photolyase from Arabidopsis with 61.33% of identity
• Blastx: (6-4)DNA photolyase from Arabidopsis with 60.55% of identity
• Eggnog: deoxyribo-dipyrimidine photolyase(COG0415)
• Kegg: Link to kegg annotations (AT3G15620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430002.1)
• Pfam: DNA photolyase (PF00875.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;