Ll_transcript_377783

• Id Trinity: TRINITY_DN50751_c2_g2_i13
• Name Transcript: Ll_transcript_377783
• Sequence: CTGCAACATTCCCTTTCTATAAACAGTCTTTCTACTCTACGCCGTGGGCTCAAAGAACAAACACCCTTTTTATAAACTTCCACAAACTTAGGATTCACAA GTATCAGCGCACGTTAGAACAACCCAATGACAACATCATCAACCGGGTCGGGTTGTATATTATGGTTTCGAAAGGGTCTTCGGATCCATCACAACCCGGC TCTTCAATTCGCTTCCCAAAATGGGGTTTCTAATCTTTACCCACTTTTTGTTATCGACCCCAATTACATCAAACCCGACCCGAATTCATTCTCTCCCGGG TCGACCCGGTCGGGTCTTAACCGAATCAAGTTCTTACTTCAGAGCCTTGTGGACCTTGATTTCAATCTTAACAAACTTGGCTCGCGTCTTCTTATTCTTA AGGGTGATCCTGTAAAGGTTCTTATTCGTTGCTTCAAAGAGTGGAATATCAGAAAGCTATGCTTTGAGTTTGACACTGAACCATATTATCAGGCTCTGGA TATTGAAGTTAAGAACTTTGCACTGGCAGAGGGAATTGAGGTTTTCTCCCCTGTAAGTCACACACTCTTCAACCCCAAGGATATTATAGAGAAGAATGGA GGAAAGCCGCCCCTTAGTTATCAATCATTTATCAAGCTTGCCGGGGAGCCGCTACCCCCTCTCCCAACCAAGCACTCTTCACTTCCTCCAGTTGGCCATC TTGGAACTTGTGATGTTTTTGAAGTTCCATCGATCAAAGATCTTGGATATGAAGACGCTAAACAGGTGCTCTTATCATATTCTAGATTATAACTCTTCAT GGGCACCTAATGAGAGAAGCTATATTCAGGATGAGTTCTCTCCTTTCAAAGGCGGTGAATCAGAAGCGTTGAAGAGGTTGGCAGAGTGTATGAAAGACAA GGTGTGGGTGGCAAACTTTGAGAAACCCAATGGTAATCCATCTGCATTTCTTAAGCCAGCAACAACTGTTTTATCACCTTACTTGAAATTTGGTTGTCTC TCTTCCAGTTATTTCTACCAGCAAATTCAGGATGTATATAAAACTATGCCTAAGCATACATCACCACCTGTTTCTCTTCTAGGACAGTTGTTGTGGCGAG ACTTCTTTTACACGGCAGCTTTTGGGACTCCGAACTTCGATAGAATGAAAGGCAATAGGATATGCAAGCAAATTCCGTGGAAGGATGATGATAAATTGCT GGAGGCTTGGAGGGAGGCTAGGACAGGATTTCCTTGGATTGATGCTATCATGGTCCAGCTACGCAAGTGGGGTTGGATACATCATCTGGCACGGCACTCT GTTGCGTGCTTTCTAACTCGAGGTGATCTGTTTGTTCATTGGGAAAAAGGACGTGATGTTTTTGAGCGACTTCTGATTGATTCAGATTGGGCCATTAACA ATGGAAACTGGTTGTGGCTCTCATGTTCATCCTTCTTTTATCAGTACCATCGTATTTATTCCCCAATTACATTTGGCAAGAAGTATGACCCTAATGGTGA CTACATTAGGCATTTTCTCCCGGTCTTAAAAGATATGCCCAAGGAGTACATTTATGAACCATGGACTGCTCCTCTAAGCATCCAGACCAAAGCAAAATGC ATAATTGGCAAAGACTATCCGATGCCAGTTGTTTCCCATGATTCTGCAAGTAAAGAATGCCGACGGAAAATGCGCGAAGCATACGCGATGAACAAAGAAT TGAAGGGTTTGGTTAGTGAGGATGATCTGAAGAAGTTAAGAAGAAAATTAGATGAAAGTGTAGAGCAAGGGGGAAAAGCTAAAAGATCAAGACAATAAGT GATTGTGGGTGAGAGATAAATTTGCTGGTTTTTTTCCTCATACTACCATGCTTTATATTAGGCATTACCTTTTGTATCACACTATCTATCATGTAGTATA TATTTTTTATATATATATTACTTTCGGGGTATATCATTTTCGGGGTACATGGAACCATAAACTACTAGACCAACACATTCCAGAACTCGATTATTTTATT AGAAGATAATTTAAAAAATATATATTACCATATGTGTATTGGACCGAATTGGCCTGCATGGATATATGAGATTTCAAATATGCCAAATTGTCTCAAGCAA TTATTATTTGCATGTAGAAGCAATTAATTAATTAATTTGGTTAAAAAGTTATCTTTTTTTTTTAAATTACAAATTCATAGGCTGTAACCCCATCATTAGT AGATTTAAAGAATGAAATAATCTTTAAGTTTTAGATCAGTAAAATGCTTTAAACCAAGGATTTTATATGTGTGAACTGATAGTGTAAGTGTTTTTTATAC TGTTAGCAAATCATTCACCATTGATTTGTTAACCATGATTGAACGTCTAACAAAAGTAATACAAACCAAACGGTTATGAAAAACTTTACAATATTGTACA AATTTTAAATTCTTAAAACCAGTAACCATGAAGAATGATATTGTCTAGTGGTTTAGCACATTGGATTTGATTTCACTAAAACCACACACATTAAATGACA TGGTTCAAGAATAAAGAATGTATTGCAAAACAAAATAGAAATGTATTGAAAATAGTGGAAATGTTTCTTTTAACAAAATATATTTATTATTTTCTTGTCC AGCCCTAATTTTAAAGATTTGTATGAAAATAGTGAAAGTAAAAAATAAAGTGATTTTATAAGAAGAAAAGAAAATTGATATATTTATGAAATCTATTGTT GTGTTGTATCATTGAAAAACAACAAAGAACCCTATCACTCTATCTCATTTCTGAGTTTGAAAACGACACCGTTCGCAACATCGTTGGGCGTGACCTGAGA ACAATCATGTATCGTAGACTTCTCTCTTCTCACCTCAAAACCCTAACTTCTCTCTCTCCGGCCCGATCTGCTTCCTCCGCCGCCATCGCCGCCGCCGCTC CTCCCGCACTCTCTTCCCTCTCCCGCCGCCACTTTTCCGATGACACGAGTGCGGTAAAAAAGAAGGTTGAAGATGTTGTGCCAATCGCTACTGGTCACGA GCGTGAGGAAATTCAAGCTCAACTTGAGGGAAGGGATATTCTTGAAATAGACCACCCTGAAGGTCCTTTTGGCACAAAGGAAGAACCTGCAGTTGTCAAA TCTTACTATGATAAAAGAATAGTCGGGTGCCCAGGAGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAACCTCATGAAT GTCCAGTGTGCTCACAGTATTTTGTGCTTGAAGTAGTGGGACCTGGTGGATCACCCTATGGACATGGCGACGGCGACGAAGATCATCACCATTGATTGCA TGCTTCAAATTTCCTTCCGGAATAAGTTCAGGAAAGATAGAAACATTGTTTAGCAAACATAAGTCCTTTCAAAGCCTGTGTTTGGTTTTGATTTATAATA TTTTGTGTTGTTGCAACTTTGAAGGTACAGTTTCTGTGATTATTAGACACATGTTGCTCATTTGCTTGAGGTATCAGATTCTTGTATTATGTTTTGTGCA CTGTGAAATAATTGATAACCACTTGATGATTCTTTGACATTAATATATCTGTTTAAATAGAACCTTAA
• Tissue: pods
• Gene name: LI_gene_179622;
• Additional information: details;

Expression of Ll_transcript_377783

FPKM

• PAB: 5.1
• PNAB: 2.7
• PS1: 1.1
• PS2: 1.1
• PS3: 1.6
• PW1: 0.3
• PW2: 1.7
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_377783

• Blastp: (6-4)DNA photolyase from Arabidopsis with 76.09% of identity
• Blastx: (6-4)DNA photolyase from Arabidopsis with 76.09% of identity
• Eggnog: deoxyribo-dipyrimidine photolyase(COG0415)
• Kegg: Link to kegg annotations (AT3G15620)
• CantataDB: Link to cantataDB annotations (CNT0001633)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430002.1)
• Pfam: FAD binding domain of DNA photolyase (PF03441.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;