| Id Trinity | TRINITY_DN50751_c2_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_377761 |
| Sequence | CTGCAACATTCCCTTTCTATAAACAGTCTTTCTACTCTACGCCGTGGGCTCAAAGAACAAACACCCTTTTTATAAACTTCCACAAACTTAGGATTCACAA GTATCAGCGCACGTTAGAACAACCCAATGACAACATCATCAACCGGGTCGGGTTGTATATTATGGTTTCGAAAGGGTCTTCGGATCCATCACAACCCGGC TCTTCAATTCGCTTCCCAAAATGGGGTTTCTAATCTTTACCCACTTTTTGTTATCGACCCCAATTACATCAAACCCGACCCGAATTCATTCTCTCCCGGG TCGACCCGGTCGGGTCTTAACCGAATCAAGTTCTTACTTCAGAGCCTTGTGGACCTTGATTTCAATCTTAACAAACTTGGCTCGCGTCTTCTTATTCTTA AGGGTGATCCTGTAAAGGTTCTTATTCGTTGCTTCAAAGAGTGGAATATCAGAAAGCTATGCTTTGAGTTTGACACTGAACCATATTATCAGGCTCTGGA TATTGAAGTTAAGAACTTTGCACTGGCAGAGGGAATTGAGGTTTTCTCCCCTGTAAGTCACACACTCTTCAACCCCAAGGATATTATAGAGAAGAATGGA GGAAAGCCGCCCCTTAGTTATCAATCATTTATCAAGCTTGCCGGGGAGCCGCTACCCCCTCTCCCAACCAAGCACTCTTCACTTCCTCCAGTTGGCCATC TTGGAACTTGTGATGTTTTTGAAGTTCCATCGATCAAAGATCTTGGATATGAAGACGCTAAACAGGTGCTCTTATCATATTCTAGATTATAACTCTTCAT GGGCACCTAATGAGAGAAGCTATATTCAGGATGAGTTCTCTCCTTTCAAAGGCGGTGAATCAGAAGCGTTGAAGAGGTTGGCAGAGTGTATGAAAGACAA GGTGTGGGTGGCAAACTTTGAGAAACCCAATGGTAATCCATCTGCATTTCTTAAGCCAGCAACAACTGTTTTATCACCTTACTTGAAATTTGGTTGTCTC TCTTCCAGTTATTTCTACCAGCAAATTCAGGATGTATATAAAACTATGCCTAAGCATACATCACCACCTGTTTCTCTTCTAGGACAGTTGTTGTGGCGAG ACTTCTTTTACACGGCAGCTTTTGGGACTCCGAACTTCGATAGAATGAAAGGCAATAGGATATGCAAGCAAATTCCGTGGAAGGATGATGATAAATTGCT GGAGGCTTGGAGGGAGGCTAGGACAGGATTTCCTTGGATTGATGCTATCATGGTCCAGGTTTGGGTTCTAAAATCGTTTTTTCCTCCAAATGAAGCAATA ACCAATAGTTGTATTACTTTGAAGCTGCATAGGTGCTCAAATCTAGTCCACCACAATATTTTCATTAGCCTTCTCAGGAAGTGCATTTGAATCTGTAATT TTCGGTTGTAGCTACGCAAGTGGGGTTGGATACATCATCTGGCACGGCACTCTGTTGCGTGCTTTCTAACTCGAGGTGATCTGGTATATGTCTTCGATAC TTTAAGCATGTCAAACTTTTTATATGCTGCCACTCTTTACCAACGTTGTTTGCTTATGCTCACAGTTTGTTCATTGGGAAAAAGGACGTGATGTTTTTGA GCGACTTCTGATTGATTCAGATTGGGCCATTAACAATGGAAACTGGTTGTGGCTCTCATGTTCATCCTTCTTTTATCAGTACCATCGTATTTATTCCCCA ATTACATTTGGCAAGAAGTATGACCCTAATGGTGACTACATTAGGCATTTTCTCCCGGTCTTAAAAGATATGCCCAAGGAGTACATTTATGAACCATGGA CTGCTCCTCTAAGCATCCAGACCAAAGCAAAATGCATAATTGGCAAAGACTATCCGATGCCAGGTCAGTTTCGTAATTTAGGGCACGTCCTTTTATAGAG CTTTCAGCATTTGGTAATTTGTATCCTCCTGTGTTCTTCAATCCATATAATTGGGTTTCTTTGAGTTTGTATTTAAAGTCTGTTGTGAACTATTTTGGTT GTAAATTGTGGTTACGAACTTACTTATGTTGTGATGCAATACCGATTGTCATTATCACGATGTGGTTTGCCGCTGTTACAGTTTGAATCTGTTGTGGCAT GATGCGGTCCAATGCAATTGAATTACTATGATTCAGATCAGAATCATGTCTTAATTTGTGGGGTCATGTGTTCACTACATTGAAAGATTTGTTTTGTTTT ATGTTCTAAAACTATTTGCATGTCTAAATTCAACATGTATTGGTTTGTAAGGGACTTTCTTATATATGCTCTATAAGTTGTGTTTCAGTTGTTTCCCATG ATTCTGCAAGTAAAGAATGCCGACGGAAAATGCGCGAAGCATACGCGATGAACAAAGAATTGAAGGGTTTGGTTAGTGAGGATGATCTGAAGAAGTTAAG AAGAAAATTAGATGAAAGTGTAGAGCAAGGGGGAAAAGCTAAAAGATCAAGACAATAAGTGATTGTGGGTGAGAGATAAATTTGCTGGTTTTTTTCCTCA TACTACCATGCTTTATATTAGGCATTACCTTTTGTATCACACTATCTATCATGTAGTATATATTTTTTATATATATATTACTTTCGGGGTATATCATTTT CGGGGTACATGGAACCATAAACTACTAGACCAACACATTCCAGAACTCGATTATTTTATTAGAAGATAATTTAAAAAATATATATTACCATATGTGTATT GGACCGAATTGGCCTGCATGGATATATGAGATTTCAAATATGCCAAATTGTCTCAAGCAATTATTATTTGCATGTAGAAGCAATTAATTAATTAATTTGG TTAAAAAGTTATCTTTTTTTTTTAAATTACAAATTCATAGGCTGTAACCCCATCATTAGTAGATTTAAAGAATGAAATAATCTTTAAGTTTTAGATCAGT AAAATGCTTTAAACCAAGGATTTTATATGTGTGAACTGATAGTGTAAGTGTTTTTTATACTGTTAGCAAATCATTCACCATTGATTTGTTAACCATGATT GAACGTCTAACAAAAGTAATACAAACCAAACGGTTATGAAAAACTTTACAATATTGTACAAATTTTAAATTCTTAAAACCAGTAACCATGAAGAATGATA TTGTCTAGTGGTTTAGCACATTGGATTTGATTTCACTAAAACCACACACATTAAATGACATGGTTCAAGAATAAAGAATGTATTGCAAAACAAAATAGAA ATGTATTGAAAATAGTGGAAATGTTTCTTTTAACAAAATATATTTATTATTTTCTTGTCCAGCCCTAATTTTAAAGATTTGTATGAAAATAGTGAAAGTA AAAAATAAAGTGATTTTATAAGAAGAAAAGAAAATTGATATATTTATGAAATCTATTGTTGTGTTGTATCATTGAAAAACAACAAAGAACCCTATCACTC TATCTCATTTCTGAGTTTGAAAACGACACCGTTCGCAACATCGTTGGGCGTGACCTGAGAACAATCATGTATCGTAGACTTCTCTCTTCTCACCTCAAAA CCCTAACTTCTCTCTCTCCGGCCCGATCTGCTTCCTCCGCCGCCATCGCCGCCGCCGCTCCTCCCGCACTCTCTTCCCTCTCCCGCCGCCACTTTTCCGA TGACACGAGTGCGGTAAAAAAGAAGGTTGAAGATGTTGTGCCAATCGCTACTGGTCACGAGCGTGAGGAAATTCAAGCTCAACTTGAGGGAAGGGATATT CTTGAAATAGACCACCCTGAAGGTCCTTTTGGCACAAAGGAAGAACCTGCAGTTGTCAAATCTTACTATGATAAAAGAATAGTCGGGTGCCCAGGAGGTG AAGGCGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAACCTCATGAATGTCCAGTGTGCTCACAGTATTTTGTGCTTGAAGTAGTGGG ACCTGGTGGATCACCCTATGGACATGGCGACGGCGACGAAGATCATCACCATTGATTGCATGCTTCAAATTTCCTTCCGGAATAAGTTCAGGAAAGATAG AAACATTGTTTAGCAAACATAAGTCCTTTCAAAGCCTGTGTTTGGTTTTGATTTATAATATTTTGTGTTGTTGCAACTTTGAAGGTACAGTTTCTGTGAT TATTAGACACATGTTGCTCATTTGCTTGAGGTATCAGATTCTTGTATTATGTTTTGTGCACTGTGAAATAATTGATAACCACTTGATGATTCTTTGACAT TAATATATCTGTTTAAATAGAACCTTAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_179622; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_377761
| Blastp | Cytochrome c oxidase subunit 5b-2, mitochondrial from Arabidopsis with 61.15% of identity |
|---|---|
| Blastx | (6-4)DNA photolyase from Arabidopsis with 61.64% of identity |
| Eggnog | cytochrome C oxidase(ENOG4111XEM) |
| Kegg | Link to kegg annotations (AT1G80230) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430002.1) |
| Pfam | Cytochrome c oxidase subunit Vb (PF01215.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |