Ll_transcript_377769

• Id Trinity: TRINITY_DN50751_c2_g2_i5
• Name Transcript: Ll_transcript_377769
• Sequence: CTGCAACATTCCCTTTCTATAAACAGTCTTTCTACTCTACGCCGTGGGCTCAAAGAACAAACACCCTTTTTATAAACTTCCACAAACTTAGGATTCACAA GTATCAGCGCACGTTAGAACAACCCAATGACAACATCATCAACCGGGTCGGGTTGTATATTATGGTTTCGAAAGGGTCTTCGGATCCATCACAACCCGGC TCTTCAATTCGCTTCCCAAAATGGGGTTTCTAATCTTTACCCACTTTTTGTTATCGACCCCAATTACATCAAACCCGACCCGAATTCATTCTCTCCCGGG TCGACCCGGTCGGGTCTTAACCGAATCAAGTTCTTACTTCAGAGCCTTGTGGACCTTGATTTCAATCTTAACAAACTTGGCTCGCGTCTTCTTATTCTTA AGGGTGATCCTGTAAAGGTTCTTATTCGTTGCTTCAAAGAGTGGAATATCAGAAAGCTATGCTTTGAGTTTGACACTGAACCATATTATCAGGCTCTGGA TATTGAAGTTAAGAACTTTGCACTGGCAGAGGGAATTGAGGTTTTCTCCCCTGTAAGTCACACACTCTTCAACCCCAAGGATATTATAGAGAAGAATGGA GGAAAGCCGCCCCTTAGTTATCAATCATTTATCAAGCTTGCCGGGGAGCCGCTACCCCCTCTCCCAACCAAGCACTCTTCACTTCCTCCAGTTGGCCATC TTGGAACTTGTGATGTTTTTGAAGTTCCATCGATCAAAGATCTTGGATATGAAGACGCTAAACAGGATGAGTTCTCTCCTTTCAAAGGCGGTGAATCAGA AGCGTTGAAGAGGTTGGCAGAGTGTATGAAAGACAAGGTGTGGGTGGCAAACTTTGAGAAACCCAATGGTAATCCATCTGCATTTCTTAAGCCAGCAACA ACTGTTTTATCACCTTACTTGAAATTTGGTTGTCTCTCTTCCAGTTATTTCTACCAGCAAATTCAGGATGTATATAAAACTATGCCTAAGCATACATCAC CACCTGTTTCTCTTCTAGGACAGTTGTTGTGGCGAGACTTCTTTTACACGGCAGCTTTTGGGACTCCGAACTTCGATAGAATGAAAGGCAATAGGATATG CAAGCAAATTCCGTGGAAGGATGATGATAAATTGCTGGAGGCTTGGAGGGAGGCTAGGACAGGATTTCCTTGGATTGATGCTATCATGGTCCAGCTACGC AAGTGGGGTTGGATACATCATCTGGCACGGCACTCTGTTGCGTGCTTTCTAACTCGAGGTGATCTGTTTGTTCATTGGGAAAAAGGACGTGATGTTTTTG AGCGACTTCTGATTGATTCAGATTGGGCCATTAACAATGGAAACTGGTTGTGGCTCTCATGTTCATCCTTCTTTTATCAGTACCATCGTATTTATTCCCC AATTACATTTGGCAAGAAGTATGACCCTAATGGTGACTACATTAGGCATTTTCTCCCGGTCTTAAAAGATATGCCCAAGGAGTACATTTATGAACCATGG ACTGCTCCTCTAAGCATCCAGACCAAAGCAAAATGCATAATTGGCAAAGACTATCCGATGCCAGTTGTTTCCCATGATTCTGCAAGTAAAGAATGCCGAC GGAAAATGCGCGAAGCATACGCGATGAACAAAGAATTGAAGGGTTTGGTTAGTGAGGATGATCTGAAGAAGTTAAGAAGAAAATTAGATGAAAGTGTAGA GCAAGGGGGAAAAGCTAAAAGATCAAGACAATAAGTGATTGTGGGTGAGAGATAAATTTGCTGGTTTTTTTCCTCATACTACCATGCTTTATATTAGGCA TTACCTTTTGTATCACACTATCTATCATGTAGTATATATTTTTTATATATATATTACTTTCGGGGTATATCATTTTCGGGGTACATGGAACCATAAACTA CTAGACCAACACATTCCAGAACTCGATTATTTTATTAGAAGATAATTTAAAAAATATATATTACCATATGTGTATTGGACCGAATTGGCCTGCATGGATA TATGAGATTTCAAATATGCCAAATTGTCTCAAGCAATTATTATTTGCATGTAGAAGCAATTAATTAATTAATTTGGTTAAAAAGTTATCTTTTTTTTTTA AATTACAAATTCATAGGCTGTAACCCCATCATTAGTAGATTTAAAGAATGAAATAATCTTTAAGTTTTAGATCAGTAAAATGCTTTAAACCAAGGATTTT ATATGTGTGAACTGATAGTGTAAGTGTTTTTTATACTGTTAGCAAATCATTCACCATTGATTTGTTAACCATGATTGAACGTCTAACAAAAGTAATACAA ACCAAACGGTTATGAAAAACTTTACAATATTGTACAAATTTTAAATTCTTAAAACCAGTAACCATGAAGAATGATATTGTCTAGTGGTTTAGCACATTGG ATTTGATTTCACTAAAACCACACACATTAAATGACATGGTTCAAGAATAAAGAATGTATTGCAAAACAAAATAGAAATGTATTGAAAATAGTGGAAATGT TTCTTTTAACAAAATATATTTATTATTTTCTTGTCCAGCCCTAATTTTAAAGATTTGTATGAAAATAGTGAAAGTAAAAAATAAAGTGATTTTATAAGAA GAAAAGAAAATTGATATATTTATGAAATCTATTGTTGTGTTGTATCATTGAAAAACAACAAAGAACCCTATCACTCTATCTCATTTCTGAGTTTGAAAAC GACACCGTTCGCAACATCGTTGGGCGTGACCTGAGAACAATCATGTATCGTAGACTTCTCTCTTCTCACCTCAAAACCCTAACTTCTCTCTCTCCGGCCC GATCTGCTTCCTCCGCCGCCATCGCCGCCGCCGCTCCTCCCGCACTCTCTTCCCTCTCCCGCCGCCACTTTTCCGATGACACGAGTGCGGTAAAAAAGAA GGTTGAAGATGTTGTGCCAATCGCTACTGGTCACGAGCGTGAGGAAATTCAAGCTCAACTTGAGGGAAGGGATATTCTTGAAATAGACCACCCTGAAGGT CCTTTTGGCACAAAGGAAGAACCTGCAGTTGTCAAATCTTACTATGATAAAAGAATAGTCGGGTGCCCAGGAGGTGAAGGCGGTGAGTTTTCCTGATCTA TCTTAATGTATCCTTGTATCCATGATTCTCCACAAGTTGATGAAAAATTCCAGAATTCTGGTTATAGCACTGACGAGGTGAACACCGGTTTGATTTCAGA GGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAACCTCATGAATGTCCAGTGTGCTCACAGTATTTTGTGCTTGAAGTAGTGGGACCTGGT GGATCACCCTATGGACATGGCGACGGCGACGAAGATCATCACCATTGATTGCATGCTTCAAATTTCCTTCCGGAATAAGTTCAGGAAAGATAGAAACATT GTTTAGCAAACATAAGTCCTTTCAAAGCCTGTGTTTGGTTTTGATTTATAATATTTTGTGTTGTTGCAACTTTGAAGGTACAGTTTCTGTGATTATTAGA CACATGTTGCTCATTTGCTTGAGGTATCAGATTCTTGTATTATGTTTTGTGCACTGTGAAATAATTGATAACCACTTGATGATTCTTTGACATTAATATA TCTGTTTAAATAGAACCTTAA
• Tissue: pods
• Gene name: LI_gene_179622;
• Additional information: details;

Expression of Ll_transcript_377769

FPKM

• PAB: 0.4
• PNAB: 0.1
• PS1: 0
• PS2: 0.1
• PS3: 0.1
• PW1: 0
• PW2: 0.5
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_377769

• Blastp: (6-4)DNA photolyase from Arabidopsis with 70.2% of identity
• Blastx: (6-4)DNA photolyase from Arabidopsis with 70.32% of identity
• Eggnog: deoxyribo-dipyrimidine photolyase(COG0415)
• Kegg: Link to kegg annotations (AT3G15620)
• CantataDB: Link to cantataDB annotations (CNT0001633)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430002.1)
• Pfam: DNA photolyase (PF00875.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;