Ll_transcript_378057

• Id Trinity: TRINITY_DN50754_c0_g1_i6
• Name Transcript: Ll_transcript_378057
• Sequence: CATTTCCTCTAGGTTCATTTTCTCATTTAAGTTTAACTTTTACTAGAATTGTAACAAATTGTAAGTAACAGCCAAAATGCCTCTCTCTATTGTATGTGCC ATGTGCCTTTCAGGACTCAATGTTACTTGGAAAGATTCATGTAGCCCTTCTTACTGTTCTTCTATCTGACATTGAAGTGGAACTTACTAATGGGTTTTCA CCTCATTTAAATAAGTCATGCAACTTTCTTGCACTGCTTCACTCGGTTGAAAGTCAAGAATGTTCCCTGAATTTCTGGAGAAGATCGCTTAATCCTCTTA GTTGGATTGAAATACTGCGTCAAGTTCTGGTTGCTTCTGGATTTGGTTCAAAGCAAGGTGCTTTACGCAGAGAGACCCTTAGCAAGGAACTGAATCTTCT TGTAAACTATGGCCTACGCCCTGCAACCTTGAAGGGTGAGTTGTTTAAAATCTTGTTAGAGCATGGAAACGATGGATGCAAAGTATCCAAGCTAGCGAAG TCAATGCCGATTGCAGAATTAGACCTTGTCAGCACAACAGAAGAGCTGGAGTCCTTAATATGCTCGACACTTTCCAGTGATGTTACCTTATTTGAAAAGA TTTCATCATCGGCATATCGGTTGCGTATGAGCACTGTTACAAAGGACAGTGATGAATGTGAGTCAGATATGGATGACTCTGGGAGTGTTGATGATGAACT TAATGACAGTGATTCATGTAGCAGTGGTGATGATTTTGCAAGTGATTCAAGAATCTCCAATATAAGAAAACTGAGGCGTGGAAAAAATAATATGCTGAAA GTGTACACTGAAATTGATGAGAGCCATCCAGGGGAAGTGTGGTTGTTAGGACTTATGGACAGTGAGTATTCAGATTTGAACATTGAAGAAAAATTGAATG CATTGGTGGCTCTAACTGATCTTCTTTCATCTGGATCCAGCATCAGGATGAAGGATCCAATGAAAGTTACAGCTGATTGCAATTCTAGCATCCCATTATG TGGTTCAGGAGCAAAAATAAAGAGATCAGTAGTAAAGAAGCGTGGGCCATTTTGGAACCAGACTGCACAAATGCAATATGTTAAAGAAGCACACTCTATT TTTCATCCAAGTCCAGTAGATTCCTCATCATTAAATTCAAATGTTAATAATCATGAGGGTTCCTTTGAGAAGGGAATAGATTCAAGTGGTTCACATCCCA TTCAATCAGTGTTTTTGGGATCTGATCGTAGGTACAATAGATATTGGCTTTTCTTGGGCCCTTGCAATGCAGATGATCCTGGCCACAGGAGGGTTTACTT TGAATCTTCTGAGGATGGTCACTGGGAGGTGATTGATACTGCAGAGGCCTTGTGTGCCTTGGTGTCAGTACTAGATGATAGAGGGAAACGGGAGGCTTTT CTTATTGAATCTTTGGAGAGACGGCAAGAACCTCTATGCAGATCTATGTCTAGGATTAAGGTTAATTGTACTGGAATGAGGTGTATGTCACGTTCTGATC AATCTGAGCAGGATATGGTCACAGAAGACAGTTACTCTCCTATATCTGATGTAGACAATCTGAATCTGACTGAGACTGCCCAAGACTCTTTGCCTTCAGC TGGGGCTGTGGTAATTGCAGCTGGAAAGAAAGGAGAGGAACAAGAGCAAAAATGGCTCCGTATTCAAGAATATGATTCTTGGATTTGGAGTTCCTTTTAT TTAGATCTCAATGTTGTAAAATATGGTAGAAGGTCATATCTTGACTCTCTAGCCAGATGTAAGAGTTGTCATGATCTTTACTGGAGAGACGAGAGACACT GCAAAATTTGCCACATGACATTTGAGCTTGATTTTGATCTAGAAGAAAGGTATGCAGTCCACATAGCCACATGCAGGGAGAAAGAAGACAGCAATATATT TCCAAATCATAAAG
• Tissue: pods
• Gene name: LI_gene_179638;
• Additional information: details;

Expression of Ll_transcript_378057

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.2
• PS2: 0.2
• PS3: 0.1
• PW1: 0.3
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378057

• Blastp: Homeobox-DDT domain protein RLT3 from Arabidopsis with 54.72% of identity
• Blastx: Homeobox-DDT domain protein RLT3 from Arabidopsis with 54.78% of identity
• Eggnog: NA(ENOG410YDFQ)
• Kegg: Link to kegg annotations (AT4G12750)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421856.1)
• Pfam: WSTF, HB1, Itc1p, MBD9 motif 1 (PF15612.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;