| Id Trinity | TRINITY_DN50754_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_378060 |
| Sequence | CTGAATTTGTTTGTTATGGCTTAGGAGGCAGAATTTCTTACTTAGATTATCATGAACTATCACTGTCAAGCCTTACTTTACTAGAGCTACTATCTTGCTT CATTTCTTGTTCTTTCTGAAACTTTCTAAAATAGCAAATGATCTTAAATTGGCGTAGGACTAACTCTACTTTGGCAGGTTTTCCATTTCCTCTATACATA TGCGATAGTTGTTGATACATGCCCCTTCACTCTTGACGAGTTTGTTCAAGCATTCCATGATAAGGACTCAATGTTACTTGGAAAGATTCATGTAGCCCTT CTTACTGTTCTTCTATCTGACATTGAAGTGGAACTTACTAATGGGTTTTCACCTCATTTAAATAAGTCATGCAACTTTCTTGCACTGCTTCACTCGGTTG AAAGTCAAGAATGTTCCCTGAATTTCTGGAGAAGATCGCTTAATCCTCTTAGTTGGATTGAAATACTGCGTCAAGTTCTGGTTGCTTCTGGATTTGGTTC AAAGCAAGGTGCTTTACGCAGAGAGACCCTTAGCAAGGAACTGAATCTTCTTGTAAACTATGGCCTACGCCCTGCAACCTTGAAGGGTGAGTTGTTTAAA ATCTTGTTAGAGCATGGAAACGATGGATGCAAAGTATCCAAGCTAGCGAAGTCAATGCCGATTGCAGAATTAGACCTTGTCAGCACAACAGAAGAGCTGG AGTCCTTAATATGCTCGACACTTTCCAGTGATGTTACCTTATTTGAAAAGATTTCATCATCGGCATATCGGTTGCGTATGAGCACTGTTACAAAGGACAG TGATGAATGTGAGTCAGATATGGATGACTCTGGGAGTGTTGATGATGAACTTAATGACAGTGATTCATGTAGCAGTGGTGATGATTTTGCAAGTGATTCA AGAATCTCCAATATAAGAAAACTGAGGCGTGGAAAAAATAATATGCTGAAAGTGTACACTGAAATTGATGAGAGCCATCCAGGGGAAGTGTGGTTGTTAG GACTTATGGACAGTGAGTATTCAGATTTGAACATTGAAGAAAAATTGAATGCATTGGTGGCTCTAACTGATCTTCTTTCATCTGGATCCAGCATCAGGAT GAAGGATCCAATGAAAGTTACAGCTGATTGCAATTCTAGCATCCCATTATGTGGTTCAGGAGCAAAAATAAAGAGATCAGTAGTAAAGAAGCGTGGGCCA TTTTGGAACCAGACTGCACAAATGCAATATGTTAAAGAAGCACACTCTATTTTTCATCCAAGTCCAGTAGATTCCTCATCATTAAATTCAAATGTTAATA ATCATGAGGGTTCCTTTGAGAAGGGAATAGATTCAAGTGGTTCACATCCCATTCAATCAGTGTTTTTGGGATCTGATCGTAGGTACAATAGATATTGGCT TTTCTTGGGCCCTTGCAATGCAGATGATCCTGGCCACAGGAGGGTTTACTTTGAATCTTCTGAGGATGGTCACTGGGAGGTGATTGATACTGCAGAGGCC TTGTGTGCCTTGGTGTCAGTACTAGATGATAGAGGGAAACGGGAGGCTTTTCTTATTGAATCTTTGGAGAGACGGCAAGAACCTCTATGCAGATCTATGT CTAGGATTAAGGTTAATTGTACTGGAATGAGGTGTATGTCACGTTCTGATCAATCTGAGCAGGATATGGTCACAGAAGACAGTTACTCTCCTATATCTGA TGTAGACAATCTGAATCTGACTGAGACTGCCCAAGACTCTTTGCCTTCAGCTGGGGCTGTGGTAATTGCAGCTGGAAAGAAAGGAGAGGAACAAGAGCAA AAATGGCTCCGTATTCAAGAATATGATTCTTGGATTTGGAGTTCCTTTTATTTAGATCTCAATGTTGTAAAATATGGTAGAAGGTCATATCTTGACTCTC TAGCCAGATGTAAGAGTTGTCATGATCTTTACTGGAGAGACGAGAGACACTGCAAAATTTGCCACATGACATTTGAGCTTGATTTTGATCTAGAAGAAAG GTATGCAGTCCACATAGCCACATGCAGGGAGAAAGAAGACAGCAATATATTTCCAAATCATAAAGTATTGTCATCACAGATTCAATCACTGAAAGCTGCA ATATATGCTATTGAGTCTGTTATGCCTGAAGATGCCCTGGTGGGTGCTTGGAGGAAGTCTGCTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_179638; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_378060
| Blastp | Homeobox-DDT domain protein RLT3 from Arabidopsis with 56.11% of identity |
|---|---|
| Blastx | Homeobox-DDT domain protein RLT3 from Arabidopsis with 56.98% of identity |
| Eggnog | NA(ENOG410YDFQ) |
| Kegg | Link to kegg annotations (AT4G12750) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421856.1) |
| Pfam | WSTF, HB1, Itc1p, MBD9 motif 1 (PF15612.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |