| Id Trinity | TRINITY_DN50755_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_378145 |
| Sequence | TACTAACTAAAAATATCTAATTCTATATTGTGGACTTTGACTAATTTGAATAACAGCAAGGGGTAGCAAACTTTTGGCACATCAATTCACAAGAAACCAA CAAGTCTTGAACTTTTCATCCTGGGTAAACTCGTTTAAGTAATGTAAAATTTATTAAAAGTTTAAAATCCATTCAGTCCGCCACCGCCTTTCTTTTACAC AACCTACCTATTTAATTTTGTCTGGAAAAGCAGTCTCTGTTAGTCTGATTCTCATATTATTTTCAATGTATCCAAATTTTAAGGAGCGACACAGCCAAAA TTTGAGATAGTACTTTCAATTTGGCAATTAACTCATAGTAATAAAGCTGAAGTTTCTAGTTTTTAATGTTCCTTCCATTTACAAATGTTTTCTTGCAGGA GTTTGTCCAAGCAGCAACCATGTCTTCATCTTATCTTCCTGCTACAACAGAGTCAATTGCTCTGGCATTGGAGGCCAAAGACCCATCCGAGGCCATCTCC ATTCTTTATCGTGTACTTGATGATCCCTCGTCTTCACCAGAAGCTCTGCGTATGAAGGAGCAGGCCATCACAAACCTAAGTGACCTTCTCAGGCAGGAGA GTAGGGGGGAGGATCTGCGTAGCCTTCTCACTCAGTTGAGGCCGTTCTTCTCCTTGATCCCTAAGGCTAAAACTGCAAAGATAGTCAGGGTGATAATTGA CTCGGTTGCTAAAATACCAGGGACATCTGATCTGCAAATTGTGCTCTGCAAAGAAATGGTGCAATGGACCCGTGCTGAAAAGCGTACATTTCTGAGGCAA CGAGTTGAGGCTAGGCTTGCAGCTCTTCTGATGGAGAGTAAGGAGTATTCAGAAGCTTTGTCTCTTCTTTCTGGCTTGGTCAAAGAGGTTAGAAGATTAG ATGATAAGCTTCTCCTTGTGGACATAGACTTGCTGGAAAGCAAACTACACTTCTCATTAAGAAACCTTCCAAAGGCAAAAGCTGCCCTCACAGCTGCAAG AACAGCTGCAAATGCTATTTACGTTCCACCAGCTCAACAAGGTGCCATAGATCTGCAGAGTGGAATACTTCATGCCGAGGAGAAGGATTATAAAACTGCA TATAGTTACTTCTTTGAAGCTTTTGAGTCTTTCAATGCTCTTGAAGACCCAAAGGCTGTTTTTAGCCTCAAATACATGTTGTTGTGTAAGATCATGGTGA ATCAAGCGGATGATGTGGGTGGAATTATTTCTTCTAAAGCCGGACTGCAATATCTTGGGTCTGACTTGGATGCTATGAAAGCTGTTGCTGATGCTCATTC TAAGCGATCGCTGAAGTTATTTGAAGTTGCTTTGCGGGACTACAAGGCACAATTGGAGGATGATCCAATTGTCCACAGGCACCTGTCATCACTGTATGAT ACCCTCATGGAGCAAAATCTTTGTAAATTGATTGAGCCATTCTCAAGGGTTGAGATTGCACACATTGCCGAGCTTATTGAACTTCCCATTGATCACGTGG AGCGGAAGTTGTCCCAGATGATTTTGGACAAGAAGTTTGCAGGGACATTGGATCAAGGTGCTGGATGCCTCGTCATATTTGACGATCCCAAGACCGATGC AATATATCCTGCAACCTTAGAAACCATTTCTAATGTTGGGAAAGTGGTGGACAGTCTTTATGCTAGGTCTGCAAAGATAATGGCATGAGGTCTCTTGTTA TTTTATTCCATTGCCAGAATATTTGTTGCTATTTTCTTCGTTATGGTGACTAGCATATCTTTTATTTTGCATCTTGAATTTGTCAAACTCAAAATCTTGG TAAGCTTCTTTCAATGGCGTTGAGTTTAGCAGGTTTTGATTATGCTGTGTGATTGTGTTTAATCTTTTAAAACTTCGGCCTGGAAGAATTGTTATCAGAA TCCCTAAGCATTTGTTCATAGGGCTGGATTTATAATCTCATGCTAAAAATTGAATTAATCCATAAGATTGATAAAGTTGAATAGTGGATCCCATGTATTT AAGAAATATAAGATTGTTACAGTAAGGTTTGGATTTGAATAGTTAGTGATAAGATCCATCTCAGGATGAGGATATTATAAAGTTGAAGAAGATTATGATC ATCAAAATCATTTCCACACAAGTGCTTAGCTATCTAAACAACTCAGTTGTACACTTATTGAATGAAAGAATACTTCAAGGACAAAGAGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_179643; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_378145
| Blastp | 26S proteasome non-ATPase regulatory subunit 11 homolog from Arabidopsis with 88.43% of identity |
|---|---|
| Blastx | 26S proteasome non-ATPase regulatory subunit 11 homolog from Arabidopsis with 88.43% of identity |
| Eggnog | cop9 signalosome complex subunit(COG5159) |
| Kegg | Link to kegg annotations (AT1G29150) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415014.1) |
| Pfam | PCI domain (PF01399.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |