Id Trinity | TRINITY_DN50755_c1_g1_i10 |
---|---|
Name Transcript | Ll_transcript_378155 |
Sequence | CAAAAAAATGTTAAAACATTATTTTAGTAATATCTATAACATTTTTATTTATAAAAGTATTAACTTACAATAATACATTTATTAAATTATAATAAAAAAG TGGATTACTTGTTGCACTTGCATCGGTGTATCCTCTTCTTCCATTCGGTGTTAGGTTTTCACACACACAATTGGAATTGAGATTCTTCCATAGCCATATT CTCTATTCTCTCACTCTCGAAATCTCAAGGATTCGGAACTTCAGCGCGATAAGGTAACGCTACTTTCCTTTCTATCTCTTTTTATTATTACTTTTCCAGA TTTGCTTTTAATTATTTCTCTTAAATTTTCAAGATGAATGTTATGGAACTTGTAGGACTGATTTGAAACAAATATGATTTCGAATTATGCTTTCTATTTT TCATTTTTTTATATTTGAAGAGGAGAGTTTGTAAACAAGAAAATCAAAATCCGAAGACCTAACCGACTTGTTAAATGCTTGTATTGATCACTTTATTATG CAAATTTTGATTTCCCGATTCAACTGGTTTAGAAATGTTATCATAATTAGGTTCTAGGTGTGGTTTATTTCCTCGATATGGTGAGTTTGGTGTAACTGTA AGGTTGTTGCTTAGTAACCATGAAGTCACGAGTTAACTGGAAATAGCATATCCTGGTGGATAAGGCTGTATATATTTACCATCCCACTAAATGGGAGCAT CGTGCATTGTGCTGCACTTTATTTTGTGTTTTGTTTCCTCACTACATCTATGATGTGTTTATTGTCTCTCGAAATTGATGCTCCTTGAATTTCAAGGTGC TTATGTTTTGAACATCATATGGTGTTATACTATATATAATTTGTTCATTTTGTGTACTTGAACCAGATTATGTACTGATCTATATGTATGTGCCAAACGA ATAAACACTGTTGTGCTTTTATCTATTCATTTAGTACCCGAACATTCCGTTTTCTGAAATTAATCCAAGTGTTGAAGATAACTTAAGTGAAAATAAATAT ACTAAGAAAGCACATTGGGAATAGAAAAGATCTGTAGGATGAACTCTAGAAACTCACACAACACTAAATGTTTTAGGAATTTAGGCTAAACTGAGGCATC TTTGTTGATTCTTTTATTTCTTAGTATCAAGACAAACCATTATTCCAGAGTAATGTTCAAGTTTCTTTTCATGAAACTTCAAGCGTAGTTCTTTATTTCT TTCCCTTAACTTCAGTTCCAGACTAACCTTTCTTCTCTTTTCTTTTTTGGGTTTTTTTATTTTTGATGACTTTTTTTTTAAGGTTATTTTTGCTGTATGG ATATCTCCACTTTTTATAATGCATTTAATAAGTATGTTATTTCAAACTCTGCCATAAGCTGACCTCATTTAGTGGGAAAAGGCTTTTACTGTTATTTTAG AATTTGCCTTGTTGTGCCACATTGATGGTTGCTATCTCACGTGTGGTGCTTTGGTGACTCTTTTGGGGCTTGTCTTCAGTGATTGCTGATGATATACACT ATACACCATTAACATACTAAAAAACTTTTAATTCATTATTGTGATTTTTGACCATTTTGAATAACAGCAAGGAGTAGCAAATGTTTGATTTTGACACATT ACAAGAGCCCAAGTCTTAAATATTTCACCCTGTCTAAATCATATAAGTAATGTAAAAGGTATTTTAAGTTTAAAACCCATTCAGACTGCCACCTTTTTTT TCACACAGCCTAATTTTCTCCTCTCTAGAAAAGCTGTTTCCGTTTCTTGGATTATTTTGAAGGTATCCAAATTGTAAGGGGTAACAGCAGCCAAACTATG AGATAATAATTTCAGTTAGCCAATTAATAATGCCAAGATTGCTAGTTTTAAATGCTCCTCTCCATTACAAATGTTTTCTTGCAGGAGTTATCCAAGCAGC GGCAATGTCTTCCTCTTATCTCCCTGCTACAACAGAGTCAATTGCTCTGGCATTGGAGGCCAAAGACCCATCTGAGGCCATCTCTATTCTTTATCGTGTA CTTGATGATCCTTCTTCTTCACCTGAAGCTCTGCGTATGAAAGAGCAGGCCATCACAAACCTCAGTGACCTTCTCAGGCAGGAAAGTAGGGGGGAGGATC TACGCAGCCTGCTCACTCAGTTGAGGCCTTTCTTCTCCTTGATTCCTAAAGCAAAAACTGCGAAGATAGTTAGGGTAATAATTGACTCTGTTGCTAAAAT ACCAGGGACATCTGATCTGCAAATTGTGCTCTGCAAAGAAATGGTGCAATGGACCCGTGCTGAAAAGCGTACATTTCTGAGGCAACGAGTTGAGGCTAGG CTTGCAGCTCTTCTGATGGAGAGTAAGGAGTATTCAGAAGCTTTGTCTCTTCTTTCTGGCTTGGTCAAAGAGGTTAGAAGATTAGATGATAAGCTTCTCC TTGTGGACATAGACTTGCTGGAAAGCAAACTACACTTCTCATTAAGAAACCTTCCAAAGGCAAAAGCTGCCCTCACAGCTGCAAGAACAGCTGCAAATGC TATTTACGTTCCACCAGCTCAACAAGGTGCCATAGATCTGCAGAGTGGAATACTTCATGCCGAGGAGAAGGATTATAAAACTGCATATAGTTACTTCTTT GAAGCTTTTGAGTCTTTCAATGCTCTTGAAGACCCAAAGGCTGTTTTTAGCCTCAAATACATGTTGTTGTGTAAGATCATGGTGAATCAAGCGGATGATG TGGGTGGAATTATTTCTTCTAAAGCCGGACTGCAATATCTTGGGTCTGACTTGGATGCTATGAAAGCTGTTGCTGATGCTCATTCTAAGCGATCGCTGAA GTTATTTGAAGTTGCTTTGCGGGACTACAAGGCACAATTGGAGGATGATCCAATTGTCCACAGGCACCTGTCATCACTGTATGATACCCTCATGGAGCAA AATCTTTGTAAATTGATTGAGCCATTCTCAAGGGTTGAGATTGCACACATTGCCGAGCTTATTGAACTTCCCATTGATCACGTGGAGCGGAAGTTGTCCC AGATGATTTTGGACAAGAAGTTTGCAGGGACATTGGATCAAGGTGCTGGATGCCTCGTCATATTTGACGATCCCAAGACCGATGCAATATATCCTGCAAC CTTAGAAACCATTTCTAATGTTGGGAAAGTGGTGGACAGTCTTTATGCTAGGTCTGCAAAGATAATGGCATGAGGTCTCTTGTTATTTTATTCCATTGCC AGAATATTTGTTGCTATTTTCTTCGTTATGGTGACTAGCATATCTTTTATTTTGCATCTTGAATTTGTCAAACTCAAAATCTTGGTAAGCTTCTTTCAAT GGCGTTGAGTTTAGCAGGTTTTGATTATGCTGTGTGATTGTGTTTAATCTTTTAAAACTTCGGCCTGGAAGAATTGTTATCAGAATCCCTAAGCATTTGT TCATAGGGCTGGATTTATAATCTCATGCTAAAAATTGAATTAATCCATAAGATTGATAAAGTTGAATAGTGGATCCCATGTATTTAAGAAATATAAGATT GTTACAGTAAGGTTTGGATTTGAATAGTTAGTGATAAGATCCATCTCAGGATGAGGATATTATAAAGTTGAAGAAGATTATGATCATCAAAATCATTTCC ACACAAGTGCTTAGCTATCTAAACAACTCAGTTGTACACTTATTGAATGAAAGAATACTTCAAGGACAAAGAGC BLAST |
Tissue | pods |
Gene name | LI_gene_179643; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_378155
Blastp | 26S proteasome non-ATPase regulatory subunit 11 homolog from Arabidopsis with 88.43% of identity |
---|---|
Blastx | 26S proteasome non-ATPase regulatory subunit 11 homolog from Arabidopsis with 88.43% of identity |
Eggnog | cop9 signalosome complex subunit(COG5159) |
Kegg | Link to kegg annotations (AT1G29150) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019415014.1) |
Pfam | PCI domain (PF01399.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |