Id Trinity | TRINITY_DN50758_c3_g3_i1 |
---|---|
Name Transcript | Ll_transcript_377982 |
Sequence | TGAGTTCAAAGGAAAGAACACGAATATGTAAAGTACACTATTCCTATTCCTATGTCCCCATCCACATTATTATCTCTTCACACCTTAACCAAACTCTCAA CATTAACATTTGAACCACCTCCTTCTCTTAATCACTCAACTCCTTCTCACTTTCTCTCCCACAATTCTTATTTATATCTTTCTTTTCATTTCAATTTTAT CTCAATGGGTATCAAAATTTTCATGTTTTCCTTCATTGTAACTTCAATATTGTTCTATCTTCTTTTCATCCCAATTTCCACCTTCAACCCTGCAATAAAC TACTTCAACATCTCCTCCAAAACAACCAAGGCATACCCAGTGACCTTTGCTTACTTGATCTCTGCATCCACTGGTGATGCTGTGAAGCTGAAAAGGTTGC TGAAGGTGTTGTACCATCCTGGGAATTATTATTTGATTCATATGGATTATGGGGCACCAGGGGAAGAGCATAGAGATATAGCAGAATATGTTGCTAGTGA CCCAGTATTTGGTAAAGTTGGAAATGTTTGGATTGTGGGGAAGCCTAATTTGGTTACCTATAGAGGACCAACTATGCTGGCTACCACTCTCCATGCTATG TCAATGCTTCTCAGGATCTGCCATTGGGATTGGTTTATTAATCTCAGTGCTTCAGATTATCCCTTAGTTACACAAGATGATCTGATCCAAGCCTTTTCCG AGTTACCAAGGGATATCAATTTTATACAGCATAGCAGTCGCTTGGGTTGGAAACTGAATAAGAGAGGGAAGCCAATGATTATAGACCCTGGCCTTTATAG CCTCAATAAATCAGATATTTGGTGGATCATTAAGCAGAGGAACCTGCCAACATCTTTTAAACTCTACACAGTTAGCTGCCACAAGTGTTGGAAGGTTATT AAATAGTTGGTGTGAGGTGGGTGTTGTTTCCCATGATGGTTCTTCAAGAACTTTATCAACCTATGTGCGCATAACTAACAACGAGTGTTGATTCAAGCGG TGCATGCTTAATTTTCTTTAAATAAGATCTTGTGTTTAAATTTTGTGGATGAAAAAATGTCTGCAAAAAGAATTAGTCTCACATACCTGTGAATATTCCT AGCTCGAATAAATTACATTCAATGCAAGGATACCTATGTGGACATTGAGAAACCCACAACAACCTCCTGGTGCTTGTACTTTCTTACTATATTACTTTTT TCTTTAATTTTTAATTTTTAATTTTGTGGTACTTGAGCTGACATGGTTGATGCTAGTAACCAGGGTGTAGTGTCATTTCTAGTCGATTCACATGCAAGAT GCTTTGATATCGGATTTTCGCTATATATCTTTTTAAAATGTTGTTATTGTTATTACTTTTGGATAATAGTTAAAAAATTAAATGCATCTCATATTTTCAA ATATAAAAGATAATATTTTATTAAATAACTAAAATTATGCAAAAAAAAAAAAAAATTTGATCAGAAGAGTTCAAAATTATTCTTTCTCCTACATTAGTTG TGGAGTTTAGCAATGCATCTATGTCTTTGTTAACATGATTGGATTCTCTCCAGCTCCAATAATATTATTTTATTTAACATTGATTGATTTTTTATTTCAA TTTCTGTCATCCGATTATTTAATTAATGTCATAGAGTTAGCACTTAGCACAGAGAATCCGCATTCCCATGTAACAGCCACTTTCACCTTTTTCTGTCATA TATTTTCAATAATAAAGTTTGTTTAGAAGTAGTAATGCAAGACGTCTTAGATATTCGGATAGATTTAAAAGTTCAAAAATTCGATTCAAATAAATAACAT TTATTGGGAGTAATATACATATCCAAAACCCGAAAATAATTAATTATTTACCCATATATATATATATACTCTATTAGACCAAAAATCATTTTCAAACATA TATTAAGATAGTGGGCTAGTGACTTAATACATTTTTCTAGCATCTTCTTTCAAAAGAGAAAAGAAACGGCAATCAGGAATCTCTTCACAATGTTGAATTT TAACTTCAAGGAAAATTCCCTAGAAACAACTAAAAATATATTGTTTTTAAACAAGTTTTTATTAATTGCCATCTTCATCTTTTATAAATGATATGGTATT TCCATGAGATCTGCTGTCTCCAAATTTGTACCGAAGTCTGTCCTAAATCAATTATACTGTGATACATCAGTTAAAAAAATTAAATATTCATAATTTTATA TATATATTTTTTAATTATGATTAGCTTGATTAGAGATATGGTTTAGGACAACAGATCCCCATCCATTTTCACCACCACATTAGCTTGATATGTTCAACTC ATTAACCAGTTAGAGTAATATTAATTTAACTCAACACATTACTTTGTAAAGAAATAAGGAGTTTTGAGTCAAAGCAATTTACAGTTAGTAATAAAATTCA TTTTCTTTTTAATCCTTAATAACATCAATTATATAAAACCTGCACCCAAAAAACATGCATTACAGATAAGGATCACTTCTCTCTTATGATGAAGAAAATT TTCAAAAAACAAAAAAGAACGTTCTGGTCTGATTGGGATTGGGAATGTGATATCGTTGGAGATAAATGATCTTTTGTCCCATGCATTACATAATCAATAA CTTGGTCACACTTTTGCATCATCTAACCTGATCTTATTCTAAATCCCCAATAAAATTCAGGTTCAGCTTGGACAATACTATCAAGATCTTTTGCTGAGTA TTGCATTAAGGGATGGGAAAATTTGCCAAGGACCCTTCTCCTCTACTACACTAACTTTGTATCATCCCCAGAAGGGTATTTCCAAACAGTTATATGCAAC TCTGAAGACTACAAGAACACCACTGCAAACCATGATCTTCACTACATTACATGGGATAATCCTCCTAAACAACATCCAAGGTCTCTCGGACTTAAAGATT ATCGGAAAATGGTTCTAAGTAGCCGTCCATTTGCGAGAAAATTCAAGAAAAATGATCCCGTACTTGATAAAATTGATGGTGAGCTTTTAAAGAGATACCA TGGGCAATTTTCTTTTGGGGGATGGTGCTCAAAGGGTGGAAAGAACAGTGCATGTTCTGGTTTGAGAAATGAGAACTATGGTGTGCTCAAACCTGGTCCG GGATCAAGAAGGGTGAAGAATTTGCTAGCTAAGATTTTCTCTGAAAGATTCTTTTACAAACAGCAGTGTAGGTAATCATTTGATTTCCATTGATGGTCAC TTGTAAAGATTGAATTGAAAAATGTAGTTGATACATAATGTCATAATCATTCCTTTTTTGTGAGCTTGAAGTTTTGTATGGTTAAACTCATATATTTTAC CATTAGTGGGAGCACGAATATATAATGGTGATTATACTGATGATATCAAAGCTTAAAATTGAATGTGGAATTTGCATACCTCCATTTTCACTTTGTTGCA CAAAGGAAAGAGAAGAAGAAATGAAACTCACCTTCGGGTGAATGAGAAGTTCAGCGAAGAAGATGATACGAGGAGGAGAAAAGATAGTATTTTAGTGAAT GAGAAGTTCAGCGAAGAAGATGATACGAGGAGGAGAAAAGATAGTATTTTAGTGAATGAGAAGTTCAGCGAAGA BLAST |
Tissue | pods |
Gene name | LI_gene_179668; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_377982
Blastp | Beta-glucuronosyltransferase GlcAT14B from Arabidopsis with 56.42% of identity |
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Blastx | Beta-glucuronosyltransferase GlcAT14A from Arabidopsis with 55.81% of identity |
Eggnog | Glucosaminyl (N-acetyl) transferase(ENOG410XQ7M) |
Kegg | Link to kegg annotations (AT5G15050) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430808.1) |
Pfam | Core-2/I-Branching enzyme (PF02485.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |