Ll_transcript_379484

• Id Trinity: TRINITY_DN50760_c0_g2_i19
• Name Transcript: Ll_transcript_379484
• Sequence: TGTGCACAGGAAGTCGCCTCAAGACCCAAGATTTCTTGCAGCCACTAGAACGAGCAGAACCAAAAGCCAGTGCCAAGGAAGAAGCCACAGATGAAATATC ATCGGTAGCTCCTAAGCCACCTCCTCCACCACCACCTTCTGTTGAGCACCTCTTACCCGGAGGAATTGGGACTTACAGTATTAGCCACATTTCCTATTCT AATAATATTCATAGGGTTCCGAAGCCAGAGACATCCACATCCCTTTTCTCTGTGCATCAAGCCACTAGTACGGATAGAAATGATGAAAACTCCAACTGCA GTTCATATACTTCAAGTGGTTTCACTTTATGGGAAGAGTCTGCTGTTAAGAAGGGAAAGACAGGGAAGGAGAATAATGTTGCAAGCAAACCCATTCTAGG AGTGGCAGAGTCTGCAGCGAAGCCAGGGCAGTGGACGTTGAGTGAACGAACGTCACAGTCGTTTTCTAACAATCACCACAACAGCGTTAACTCTCGCTCC TCCTCTCAGTTAGTCTTACGTTTTCTCTTTCTCTTGTTCCACGGTGCCTCTTTTTTCTTTATATTTTTCATCGGTAAAGAGTTGCGTCTTAAGGCTTGCT ATTTACATTTTTATGCTTGATTCCTGTGAATTTTCTATCCAACAGGACAAGTGGGCAGAAGAACCAGAGTTTTATAGAAATGATGAAGTCCGCAAAGGAC GGTGCCCAGGATGAAGAGATAGAAAACGAAGAAGCATTTTTTCTTAAGAAAGAATCCCAAAGAGAACTGAAAGTGAAAGTGGATGGGAAGAGTACTGAAC AAAAGCCAAATACCCCAAGATCAAAACATTCTGCAACTGAGCAGCGGAGAAGAAGCAAAATTAATGACAGATTCCATATGCTACGAGAGCTTATCCCGCA CGGTGACCAAAAGAGGGACAAAGCATCTTTTCTCTTAGAGGTTATCGAGTATATTCATTTTTTACAAGAGAAGGTGCATAAGTATGAAGGTTCATTCCAA GGGTGGAGTCACGAACCAGAAAAATTAATGCCATGGAGTAATAATGACACGCCAGCAGAAAGCTTTGAACATCGTGGTGCAAATAGTGGGTCAGGTCCAT CTCCATCATTTCTGTTTGCTTCAAAGACAGAAGAGAAAAATATCACCATTCCCCTGAAAACTCCTGGAAGTATTCAGAATGTGGAATCTGGCTTGGACAC AGGAACTAACTTCAAGACAATGGATCATCATCCTGGCATAACGAACAAGGCTTTTCCTGTTCCTATTTCTCCACAGCCAAATTTCTTCACTCCAACCCAG AGTGGAGGTCAAGATGGAATGATGTCTCAGCTCACACATAGATTGGCATTTGATGTAGAGAATGCTATATATCAACCTTCGGATGAGTGTCAGACTTTGA CAGCTACAAGTGAAAAACTGAAGGATAAAGAGCTCACCATTGAAGGTGGTGCTATTAGCATATCAAGTGTGTACTCAAAAGGGTGAGAATTTATACAGTT TTATTTGATTAGTTTGTAAAGTGTTGAAAATTTTTTTTATCACATTTAAACTATTTTTAATGTGTTAGACATCAAATTTTGTTTCGTCCACTAGCTAGCA TTCTTGGTAGAGAATGGAGACTTCATCAGATAATTTATCATAAAGGTGACATTAATAGCGTACTTAACTTGACCTTGACATCAGGGTTTGAGGGTTAAGA AATGATTACCTGCAAATTCACCGGGTTGTGCTAGGCAACCTCAATATGAAATTACTTCACTTCCTTTCTCTGAATAGATTTGCAATTCTTGATGCTCTAT AATCGGGGAAGAAGTCAATAGTCTTCATTTTGAATCTTAAAAACTCTATTTCAAACAATTGACCATGAAAATCTTTAGAATATTTTTGAATTTAGTAGGT GTAGTTTAGAATTTCTACCATATCGTACTTTTTTTATGGCCAACCATTTTCTATCTAAATACTTTGCGTAAGATAGATACTTTATTAGGATTGCAACATT GACTTGTAGGAGCATTTTGATTTTGATTTTGATTTTAATATGTTGAAGAGAGTCTATTGTATTTGGACAGATTGTTGGATACACTTACGCATGCACTGCA AAGTTCAGGAGTGGATTTGTCACAAGCTAGCATCTCAGTGCAAATTGAACTTGGTAAGCAAGCAAACATCAGACCAACTTTACCAATGTCAATGTCTGCT GCTAAGGATGATGAAGTTCCTTCTAACAATCAGAGGATGATGCGATCTAGAGTTGCTAGCTCTGAGAAGTCTGATCAAGCAGTAAAGAAGCTAAAGACGT GCAGAACCTAATTCGACCGTTATGTTATATTCATTCTTTCCTTATTATAATTTTTATTAATTTT
• Tissue: pods
• Gene name: LI_gene_179697;
• Additional information: details;

Expression of Ll_transcript_379484

FPKM

• PAB: 0
• PNAB: 0.8
• PS1: 0.9
• PS2: 0.6
• PS3: 0.1
• PW1: 0.6
• PW2: 0.4
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_379484

• Blastp: Transcription factor BIM1 from Arabidopsis with 43.32% of identity
• Blastx: Transcription factor BIM1 from Arabidopsis with 43.66% of identity
• Eggnog: Transcription factor(ENOG411216Z)
• Kegg: Link to kegg annotations (AT5G08130)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464199.1)
• Pfam: Helix-loop-helix DNA-binding domain (PF00010.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;