| Id Trinity | TRINITY_DN50760_c0_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_379459 |
| Sequence | TGTGCACAGGAAGTCGCCTCAAGACCCAAGATTTCTTGCAGCCACTAGAACGAGCAGAACCAAAAGCCAGTGCCAAGGAAGAAGCCACAGATGAAATATC ATCGGTAGCTCCTAAGCCACCTCCTCCACCACCACCTTCTGTTGAGCACCTCTTACCCGGAGGAATTGGGACTTACAGTATTAGCCACATTTCCTATTCT AATAATATTCATAGGGTTCCGAAGCCAGAGACATCCACATCCCTTTTCTCTGTGCATCAAGCCACTAGTACGGATAGAAATGATGAAAACTCCAACTGCA GTTCATATACTTCAAGTGGTTTCACTTTATGGGAAGAGTCTGCTGTTAAGAAGGGAAAGACAGGGAAGGAGAATAATGTTGCAAGCAAACCCATTCTAGG AGTGGCAGAGTCTGCAGCGAAGCCAGGGCAGTGGACGTTGAGTGAACGAACGTCACAGTCGTTTTCTAACAATCACCACAACAGCGTTAACTCTCGCTCC TCCTCTCAGACAAGTGGGCAGAAGAACCAGAGTTTTATAGAAATGATGAAGTCCGCAAAGGACGGTGCCCAGGATGAAGAGATAGAAAACGAAGAAGCAT TTTTTCTTAAGAAAGAATCCCAAAGAGAACTGAAAGTGAAAGTGGATGGGAAGAGTACTGAACAAAAGCCAAATACCCCAAGATCAAAACATTCTGCAAC TGAGCAGCGGAGAAGAAGCAAAATTAATGACAGATTCCATATGCTACGAGAGCTTATCCCGCACGGTGACCAAAAGAGGGACAAAGCATCTTTTCTCTTA GAGGTTATCGAGTATATTCATTTTTTACAAGAGAAGGTGCATAAGTATGAAGGTTCATTCCAAGGGTGGAATCACGATCCAGAAAAATTGATGCCATGGA GAAATAATGACAAGCCATCAGAAAGTTTTGAACATGGTGGCACAAATAGTGGGCCAGTTCCATCTCCATCATTTCTGTTTGCTTCGAAGACCAACGAGAA AAATATCGCCATCTCCCAGACAATTCTTGGAAGTACTCAGAATGTGGAATCTGGCTTGAGCACAGCAACTAACTTCAAGCCAATGGATCATATTCCTAAT TCTCCACAGCCAAATTTCTTCAGTCCAACTCAAAGTGGAGTGGTGTCTCAGCTCGCACGTAGATTGTCATCTGATGCAGAGAATGCCATATATCAACCTT TCGAGGAGTGCCGGACTATGATGGCTACCAGTGAAAAACTGAAAGATAAAGAGCTCACCATTGAAGGTGGTGCTATTAGCATATCAAGTGTGTACTCAAA AGGATTGTTGGATACACTTACACATGCACTACAAAGTTCAGGAGTGGATTTGTCACAAACTAGTATGTCAGTGCAAATTGAACTTGGTAAGCAAGCAAAC ATCAGACCAACTGTACCAATGTCAATGTGTGGTGCTAAGGTATACTCACACTCTTATTGTCCCTTTGTCTTGTCTTTCTTATAAGCATAATTTGATTCTA ACATTACACTACTACTTTGTTTGGGAGTGAGAGTTTGGAGGAAAAGGGAAGGGAAGAGATGGATTTGGAAAACTTTCCCCTTGTTTGGGAATTGAATGAA GAGAAGGGGAATGTTTTGAAGGATTTCTCAAACCCTCCATGTCTCTATTTTTTTAAATTCAATTGTCTAAAATGAATTTATGGGTTGGTGGATTTATCAA CATATTACCCTAGTCAAAATAACTCAATTTTTTTTTTTATAAATTTGTGAATTTTATTCCGTATAATAAAAAAATTATGAAAAATCCTTTCTTTGTGCTG CCTTCTAGTCTTCTTTTACGATATTCAGAGAATTCCTTGTATCGCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_179697; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_379459
| Blastp | Transcription factor BIM1 from Arabidopsis with 48.45% of identity |
|---|---|
| Blastx | Transcription factor BIM1 from Arabidopsis with 47.83% of identity |
| Eggnog | Transcription factor(ENOG411216Z) |
| Kegg | Link to kegg annotations (AT5G08130) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464194.1) |
| Pfam | Helix-loop-helix DNA-binding domain (PF00010.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |