Id Trinity | TRINITY_DN50760_c0_g2_i9 |
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Name Transcript | Ll_transcript_379461 |
Sequence | TGTGCACAGGAAGTCGCCTCAAGACCCAAGATTTCTTGCAGCCACTAGAACGAGCAGAACCAAAAGCCAGTGCCAAGGAAGAAGCCACAGATGAAATATC ATCGGTAGCTCCTAAGCCACCTCCTCCACCACCACCTTCTGTTGAGCACCTCTTACCCGGAGGAATTGGGACTTACAGTATTAGCCACATTTCCTATTCT AATAATATTCATAGGGTTCCGAAGCCAGAGACATCCACATCCCTTTTCTCTGTGCATCAAGCCACTAGTACGGATAGAAATGATGAAAACTCCAACTGCA GTTCATATACTTCAAGTGGTTTCACTTTATGGGAAGAGTCTGCTGTTAAGAAGGGAAAGACAGGGAAGGAGAATAATGTTGCAAGCAAACCCATTCTAGG AGTGGCAGAGTCTGCAGCGAAGCCAGGGCAGTGGACGTTGAGTGAACGAACGTCACAGTCGTTTTCTAACAATCACCACAACAGCGTTAACTCTCGCTCC TCCTCTCAGTTAGTCTTACGTTTTCTCTTTCTCTTGTTCCACGGTGCCTCTTTTTTCTTTATATTTTTCATCGGTAAAGAGTTGCGTCTTAAGGCTTGCT ATTTACATTTTTATGCTTGATTCCTGTGAATTTTCTATCCAACAGGACAAGTGGGCAGAAGAACCAGAGTTTTATAGAAATGATGAAGTCCGCAAAGGAC GGTGCCCAGGATGAAGAGATAGAAAACGAAGAAGCATTTTTTCTTAAGAAAGAATCCCAAAGAGGTAATTCTATAATTATGGAATCATTTTCTAGTGAGT GGCAGAAATATACATCAAGAAAAGCTTTTTCCACTCAGTGAGTGCAGCTCATGGATCTAAC BLAST |
Tissue | pods |
Gene name | LI_gene_179697; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_379461
Blastp | Transcription factor BIM1 from Arabidopsis with 51.22% of identity |
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Blastx | Transcription factor BIM1 from Arabidopsis with 48.08% of identity |
Eggnog | Transcription factor(ENOG411216Z) |
Kegg | Link to kegg annotations (AT5G08130) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464195.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |