| Id Trinity | TRINITY_DN50760_c0_g3_i17 |
|---|---|
| Name Transcript | Ll_transcript_379480 |
| Sequence | AAAAACTATTTAAAAACATAAATCATATGAAACAGACCCAAACGAGAAGAGAAAGAAAGTGAGAGAAAATAGCAACAGGGTCCGATCCAAAACCAAAACC TCAATTTTCTCTCTCAGATTCTTCTGTAATTCCATTTTGTCGCGCACTCCATTTTTTCACTTACTGCTTCAACTCACGCTTCTCAGTGTTTATGTGTGTT TCTGATTCCAGATTCTGTGAAATCTCTAATTGGACGTTTTGTAATTGCTAATTTTGGAGCCGAACTTTTTCGTAAAAGGACTTCAACGCGTGTTTCATTT GATATACACAAGTTGTAGTGAATTTACCGCCAAAATCTGATCCAGCACTTGTGAGTGAGGATTTGGAATAGTGTAATTAGATAAGTAGTTATTTAGAGCC GAGAGTGAATGAACGTATCTCCGAATTTGAAAACACGGTTTCTGTTCAATTCGGATCTGAGAATTCTTTATCAGCGAGACACTGATCGAAGCTGCAAGTT TTCAATTATGTGTTAGTGAAGCTGAATTCAAACATTTTTAAGCGGTAACGAAACTGAATTCTGTGAGATTCAAAATTCTGTTGAATTACCGGGAACGAAG GAAAAGAACAACAGTATTCAGGTTTTGATGGAGCTTCCTCAAGCGCGTGCGTTTGGAACCCAAGGAAGGAAACCGATGCATGACTTTCTGTCACTGTACA GTAATTCAACTACTCAACAAGATTCAAGGCCACCTTCTCAAGTGTGCACAGGAAGTCGCCTCAAGACCCAAGATTTCTTGCAGCCACTAGAACGAGCAGA TGCTAAAGCCAGTGCCAAGGAAGAAGCCACAGATGAAATATCATCGGCTACTCCTAAGCCACTTCCTCCAACACCACCTTCTGTCGAGCACATCTTACCT GGAGGAATTGGGACTTACAGTATTAGCCACATTTCCAATTTTAATAATATTCAAAGGGTTCCAAAGCCAGAAGCATCCCTTTTCACCGTGCATCAAGCAA ATAGTGCCGATAGAAATGATGAAAACTCAAACTGCAGTTCATATACTTCAAGTGGTTTCACTTTGTGGGAAGAGTCTGCGGTTAAGAAGGGAAAGACAGG GAAGGAGAATAATGTGGCCGAGAAACCCATTCTAGTAGATTCTGCGGCGAAGTCAGGGCAGTGGACGTTGAGTGAGCGAACGTCACAGTCGTTTTCTAAC AATCGCCACAACAGCTTCAACTCTCGCTCCACCTCTCAGACAACTGGGCAGAAGAACCAGAGCTTTATAGAAATGATGAAGTCCGCAGAGGATGGTGCTC AGGATGAAGAACTAGAAAACGAAGAAACATTTTTTCTTAACAAAGAATTCCAAAGAGAACTGAAAGTGAAAGTGGATGGGAAGAGTACTGACCAAAAGCC AAACACACCAAGATCAAAACATTCTGCAACAGAGCAGCGGAGAAGGAGCAAAATAAATGACAGATTCCAGATGCTACGAGAGCTTATTCCACACAGTGAT CAAAAGAGGGACAAAGCATCTTTTTTGTTAGAGGTCATCGAGTACATTCATTTTTTACAAGATAAGGTGCATAAGCATGAAGGTTCGTTCCAAGAGTGGA ATCACGAGTCAGAAAAATTAATGCCATGGAGAAATAATGACAGGCCAGCAGAAAGTTTTGAAACTCGTGGGACAAATAGTGGGTCAGATCCATCTCCAAC GTTGCTGTTTGCTTCAAAGACTGACCAGAAAAATATCACCATCTCCCCGACAATTCGTGGAAGTATTGGGCATGTAGAATCTGGATTGAACTCATCAACT AACTTCAAGACAATGGATCATCATCCTGGAATAATGAACAACTCTTTTCCAATTCCTATTTCTCCACAGCCTAATTTCTTCATTCCTGCCCAAAGTGGCG GTTCTGGTGGAGTGGTGTCTCAGCTCGCACATGGATTGACATCTGATGCAGAGAATGGGATATATCAACATTCAGAGGAGTGTAAGACTATTGCAGCTAC AAGTGAAAAATTGAAAGAGAAAGAGCCCACTCTCGAAGGCGGTGCCATTAGCATATCACATGCGTACTCAAAAGGATTGTTGGACACACTTACACATGCG CTTCAGAGTTCAGGAGTGGATTTGTCACAATCTAGTATCTCAGTGCAAATTGAACTTGGGAAGCAAACAAACAGACCAACTGTGCCAATGTCAATGTGCA GTGCTAAGGTATAGTAACACTCTAATTGTCCCTTTGCCAGATCTTTCTTAAGAACATAGCTTGATTTCTAGCATTACATTAAGGGTTTAAAATCTATACA AAGCGTAAAAAAAATTACACCATCAACATATCATCAACCATTGATTTATATTACTTTTGTTTGAGAGTCAAATATGTTTAACAAATCAATGGTGGATGGT TGACTGACAGTATAAAAATCACTTACATTGTTTATCTAATTTGTCTTATCATTTTGCCTTTAGGGTGAAGAAGTTCCTTCTGACAATCAGAGGATGATGC GCTCTAGAGTTGCTAGCTCTGAGAATTCTGATCAACCAGTGAAAAAGCTAAAGACATGCAGAACCTAATTCCACCGTTGTATTTCATTCTTTCATTATTA TAATTTTTATTAATTTTâBLAST |
| Tissue | pods |
| Gene name | LI_gene_179698; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_379480
| Blastp | Transcription factor BIM1 from Arabidopsis with 46.37% of identity |
|---|---|
| Blastx | Transcription factor BIM1 from Arabidopsis with 44.65% of identity |
| Eggnog | Transcription factor(ENOG411216Z) |
| Kegg | Link to kegg annotations (AT5G08130) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451868.1) |
| Pfam | Helix-loop-helix DNA-binding domain (PF00010.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |