Id Trinity | TRINITY_DN50762_c2_g3_i14 |
---|---|
Name Transcript | Ll_transcript_378803 |
Sequence | GTAATAAACCATAATAACATGAGTCGTGCTTGTCGTGTGTATATATATATATATATATATGTTATCCTAGGACCTTGCAAAGGTTTGGTAAAAATATCGG CAAGTTGATCATGGGAGCAAGCATGATACTTCCCACGCACTCACCTCATGGAATAACTCTACACAATTGTAACTCCTGAAGTAAATGTTTCAGCCACATG AGATCATCTGTAGTGTTAGCAATAGCCTGATATTCAGTTTCTATGCTTGACCTGGCAACGACGTTACGTTTTTTACTCTTTCAACTTCCAAAAGATCAAA TTTCCACCTAAAAGCACAGTAACTTGCAGTGGATTATCTATCACGTAGATCTCCTGCTGAATCTGTATATGAATACTGAACAATATTAGCATGGCCTCGA TCTGCATAAATAATTGCCTTTTCGGGTTATCCTTTTGTGGCCAAGTGGATTGCTTCAGTTTTTGCTTCATTAAGAGTATGTAGTCTGCATTACTTGTGAG TTGTGAGTTGTGACATGAAAACAAAATACTGTTATGAATGTTCTATAATTGTTCAAACATGTGATGAAGTCTTCTAAAGCATGTATTTGTTTTAATAGGA ATTTCCTTCTGTTTTATTTCCTGCTTCCAGGTCCCTACATACAGCCATGGTAACTACTAACTACTAACTACTTTCCGCGATATTATTCCTACAAAGCTCG CTACTTTAGTCTGGGACTGTCTTATGAAATATATAAAAATATACCCAACTTTCTCTTGACATATATATTGATCAGGTTTCTTAGCTCTATTTTTTGGTCA TTGACTTACAGTAGTCTTTAATAGACTGCCATGGTGTTTACAAGGATGATATTTTTGTGGATTTGTAGATTGCTCCAGTGATACATGAACGGACATATGA TGCCATTTGTCATGATTTGCTGAATTGGGGGGCAATAAATATATTGATGAAGTAACATACAACCTCTATCCCCCCTGAATTTATGTCCACTCTCATATAT AAAATGAAACTACTGTATTTTAAAGGTTCACGACAAGACTAGTGGACCATCTTACAAAAAAAAGGTTCTTTTGGAGGACCATGATCCTATCATGTCTGAA AACTATTGTGTTAAGTTGTCAGAAGAAGCTTGCAGAAAGGAAAGGTTGTTCTTGTGAAGAGGAGACATGGCAGCTAACACGGTTTTATCCTATAGTAGAG GTACAAATAACGGTAATATGATTTTCCCTCACAAAACATGCATTTACGTATGAAAATCTCATCTAGCGGATAGCTTAGGCAAAGATAATGTTGAACAATT TTCTAAGAAGATTAGCCTATGGTGTAGTTGTATGTTTCACTATTACAACTAAATTTTTATGCCTTAGATATGATAAATAGGCACACAACATTTACTTCTA TCCCTAAATATCATTGTGATATAAATAAAATAAAATAAATCCGAATTCCAGATGTTTATCAATTTATAAATTACGTGACAACTATATTTATGACGATCCA CTTGGTTGCATATATAGCTTCAATATTTATAGCCTTATGCCCTCATGTGATGAGTGGTGGTGAGTGGATAATTATTCAGGAACCATTGAAAAGTAGCAAA AAATGAATTGCCAAAAATCTATCCATGTTTAAATGACCCAAGTCCAAGTTTGCACAATAACCCCAAAATCCTCTTGCTCATTCAATAAGATCGAGGCAGA CACCAACTTGGGCTCGACCATCAGGCTCTGATGATGGACATTCAAGGTTTTATTTTCTTATGCCACCATAACTCTGATGATTGCTTAATGAGATTACTTT GTATTTCTTCCTTTCTCCATCGACCTTGATGTTCCCTGATGGCACTTGCTTATTATTCCCCCACTTTTTATCTGTCTACAGACTTGCATAAGGTTGTGAT TATAAGAGTTATGGAACTATAATGTTTCTTTTGGAATCACCAACTATGCTGCAACTTTCTTGCATGTAATTTTTATCTTTCGTGCTAGCATATAGTGATT TTGTTGAAATGTGCCACCATTTTCTAGAAGCTTCTACAAGCATGTAGAGAGCAAAAATAATTTGTGACTTGTAACTACAGTTTTTTAGATAATTACCACA ATGTAGTATTATATAGAAGCCATTAAGGCACTATGAGATGTATGAATGATGTTCTTTCATATTTGAAAATATAGGCCCTTCAACTCACTAAAGTATTCCC CTAATAATTGATCTATCAAATATACATTGACTTCATCTAAGACAATCTCCTTCTATGTTCAACTATTATTTCTATGACCCACTAAAAGCAACAAGTGATT CGGTGCCTGAGGCATGCATCCAATGATTTCAAGAAGATGGGGAACAAATTTTTGTATTCACCGTGGGTGGAGTGACCAGATCATGGGTATTAATAATTCT CTTGATAAAATGAGATTGAAAATACTCACTTCCATTTTTTTTTTCAGATTTTCTAATCTGATATGTTGTTTTAATCCTCAGCTTAGAGTCTTTCACAAGC TTACTGGTAAGCTGACAAGGGGAATTATTCTGGGCTCATCAAGTCCTGAACAACTTATTGCAGTATTGTAGTTTTTACCCTTTTCAATGCCAAACTTGAT CCTTAACTTGGAACTACAATTTGTCATGACTATTCTTGTATGCTATTTTCTTTTTGCAGAAATTGAAGGTGTTAGTGACATATGAACTTACATTAGATGA TATCCAGATATGATGTTATTTACTTGGGAACTAAAAGATGAGCTTCTGGTACTTGTAAATTTGTAATCATATATATTTATACCTTACATTACAATGGGTA AAGTTAATGTGCTAAGACGATTCGGTATAGGAATAGGAGAGTTCAGCTGACCAAACTGTATAATTATTGGCCCTTTGTTGATTTCACAACGGTTGGTCTT TGAAAATTTGGAAAAGAAATAAAAAAAATTAAAAACGCCCACCGTGGGGCTCGAACCCACGACCACAAGGTTAAGAGCCTTGCGCTCTACCAACTGAGCT AGACGGGCTTGTTGATATTTTGTTCAATACCATTTTTATAAACGGAAATACGTGATTTCATTCAGGGATGGTTAGATTTTAGAGTATAAAATCTATGCGA GGCAGTGTAAAAATTTATACATACACCTCATCATCTGCCATTTATTTGGATTACTTTTTTGAAATGTCAACAATCATTAAATATTAATGGTGAAGATGTA ATGACAGTGTATAAAACTCATACACTGTCAATGTATACATTTTTTTTCTCTAGTTTTTTAACCAAACTAAATTATAG BLAST |
Tissue | pods |
Gene name | LI_gene_179712; |
Additional information | - |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_378803
Blastp | - |
---|---|
Blastx | SNARE-interacting protein KEULE from Arabidopsis with 85% of identity |
Eggnog | Vacuolar Protein(COG5158) |
Kegg | Link to kegg annotations (AT1G12360) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_020216524.1) |
Pfam | - |
Rfam | tRNA (RF00005) |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |