| Id Trinity | TRINITY_DN50762_c2_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_378786 |
| Sequence | GAGATGTCTATGTCAGATTCGGATCTCTCGTCCTCTTACCCGCGAACGAATTTCCTTCTGTTTTATTTCCTGCTTCCAGGTCCCTACATACAGCCATGAT TGCTCCAGTGATACATGAACGGACATATGATGCCATTTGTCATGATTTGCTGAATTGGGGGGCAATAAATATATTGATGAAGTAACATACAACCTCTATC CCCCCTGAATTTATGTCCACTCTCATATATAAAATGAAACTACTGTATTTTAAAGGTTCACGACAAGACTAGTGGACCATCTTACAAAAAAAAGGTTCTT TTGGAGGACCATGATCCTATCATGTCTGAAAACTATTGTGTTAAGTTGTCAGAAGAAGCTTGCAGAAAGGAAAGGTTGTTCTTGTGAAGAGGAGACATGG CAGCTAACACGGTTTTATCCTATAGTAGAGGTACAAATAACGGTAATATGATTTTCCCTCACAAAACATGCATTTACGTATGAAAATCTCATCTAGCGGA TAGCTTAGGCAAAGATAATGTTGAACAATTTTCTAAGAAGATTAGCCTATGGTGTAGTTGTATGTTTCACTATTACAACTAAATTTTTATGCCTTAGATA TGATAAATAGGCACACAACATTTACTTCTATCCCTAAATATCATTGTGATATAAATAAAATAAAATAAATCCGAATTCCAGATGTTTATCAATTTATAAA TTACGTGACAACTATATTTATGACGATCCACTTGGTTGCATATATAGCTTCAATATTTATAGCCTTATGCCCTCATGTGATGAGTGGTGGTGAGTGGATA ATTATTCAGGAACCATTGAAAAGTAGCAAAAAATGAATTGCCAAAAATCTATCCATGTTTAAATGACCCAAGTCCAAGTTTGCACAATAACCCCAAAATC CTCTTGCTCATTCAATAAGATCGAGGCAGACACCAACTTGGGCTCGACCATCAGGCTCTGATGATGGACATTCAAGGTTTTATTTTCTTATGCCACCATA ACTCTGATGATTGCTTAATGAGATTACTTTGTATTTCTTCCTTTCTCCATCGACCTTGATGTTCCCTGATGGCACTTGCTTATTATTCCCCCACTTTTTA TCTGTCTACAGACTTGCATAAGGTTGTGATTATAAGAGTTATGGAACTATAATGTTTCTTTTGGAATCACCAACTATGCTGCAACTTTCTTGCATGTAAT TTTTATCTTTCGTGCTAGCATATAGTGATTTTGTTGAAATGTGCCACCATTTTCTAGAAGCTTCTACAAGCATGTAGAGAGCAAAAATAATTTGTGACTT GTAACTACAGTTTTTTAGATAATTACCACAATGTAGTATTATATAGAAGCCATTAAGGCACTATGAGATGTATGAATGATGTTCTTTCATATTTGAAAAT ATAGGCCCTTCAACTCACTAAAGTATTCCCCTAATAATTGATCTATCAAATATACATTGACTTCATCTAAGACAATCTCCTTCTATGTTCAACTATTATT TCTATGACCCACTAAAAGCAACAAGTGATTCGGTGCCTGAGGCATGCATCCAATGATTTCAAGAAGATGGGGAACAAATTTTTGTATTCACCGTGGGTGG AGTGACCAGATCATGGCTTAGAGTCTTTCACAAGCTTACTGAAATTGAAGGTGTTAGTGACATATGAACTTACATTAGATGATATCCAGATATGATGTTA TTTACTTGGGAACTAAAAGATGAGCTTCTGGTACTTGTAAATTTGTAATCATATATATTTATACCTTACATTACAATGGGTAAAGTTAATGTGCTAAGAC GATTCGGTATAGGAATAGGAGAGTTCAGCTGACCAAACTGTATAATTATTGGCCCTTTGTTGATTTCACAACGGTTGGTCTTTGAAAATTTGGAAAAGAA ATAAAAAAAATTAAAAACGCCCACCGTGGGGCTCGAACCCACGACCACAAGGTTAAGAGCCTTGCGCTCTACCAACTGAGCTAGACGGGCTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_179712; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_378786
| Blastp | - |
|---|---|
| Blastx | SNARE-interacting protein KEULE from Arabidopsis with 75% of identity |
| Eggnog | Vacuolar Protein(COG5158) |
| Kegg | Link to kegg annotations (AT1G12360) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_004515765.1) |
| Pfam | - |
| Rfam | tRNA (RF00005) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |