Ll_transcript_378233

• Id Trinity: TRINITY_DN50763_c2_g1_i6
• Name Transcript: Ll_transcript_378233
• Sequence: AAAAAGCGTTGATATTAAAAACTATATAAGCCTTGATCTTATTTATCTAGTTTGGTAAAGTAGCGTAGACGACGAACCGAAACGAAATTTCCAACCTTCA TTCCAAAATTTTCATGTCCATCTTGCCCTCACAAACCCAAACAGCACCTTCATCTTCATCATCTTCATCTTCTTCAAACCCTAATTCCCAACATGGATTT TCAATCCCTTCTTCTTCCTCCATCCTCGACCTTCCTCTCGGATCCCTCCAGATCCACGATTCCCATATTCCAGGTCCATCAATTCCTGCTGCAGAAGATT CTGGTGGAACTTCCGAAAAGGTGACAGAATATGGGTCTCCAAGTGGTTTGGAGGCTTCATCTCAGCAAAACTCTAGAACACGTTCTAGGAGTCACTCAGG AAGACGAACGTCTGGATCATCTCAATCAGTGGGGAACACAACAGGAACAACTTCTTCTCAAAGAAGTCAACAGACTCTTGGGTCTGTAAATTCTCATGGA AACTCACCTTTGGCAGGAAGGAAGTCTCAGATGGTGAATGGTAATTACTTGCTGAATTTTCAATATGATCCAATATCTCGTTCTCAGCCAAGGGGTCCTC CTCCTCCTCCACCCAGAAGGCAGCGAAAGAGAAAACCATACAACAAAGATTTGTTTTTGCAGGCAAATTACAAATTCATGGTGCTAGATTCAGGAAATTA TTCAGCTGAGTCTATGGATCCAGATAAAATGTTGCAGTGGGAAGATATTATATGTGTGACTTATTCGACCCCCCTTCCAATTCAGTGTCCAATTTGTTTG GAGTATCCCCTCTGTCCACAAATAACCTCGTGTGGACATATTTTCTGTTTCCCATGTATTCTACAATACCTATTATTGGGTGAAGAGGATAACAAAGGTG AATGCTGGAAAAGGTGTCCTTTATGCTTTGTGATGGTATCTGTCAAAGATTTATATACCGTACACATATCAAATGTCAAACAGTATCAAGTAGGAGATAA TATTGAGTTCACATTTTTAACTCGAAAAAAGGATTCATTTACTCTGTCCCATAAAAATAAACAAGAGACAGATACGACATCATGTGGCAATGAAGATTTT TGTGATCCCTTTTCTAAGTTTACACTCACATCAGATGTAGACCTTTCAGTGAGACATGCAATCTCAGATCTAGATGGTTGGCTGGCCAGGGCTGATTCAG GTCTTGTTGATGACCTAGAGAAGCTTCCTTATGTTTGTGCTGCAATGCAGCAATTAAAGCAGAGAAAGAAGTATTGGAACGAGCACAGAGCTTGTGACAG TGAAAAATCTTCTAGGCTTATTGATTATGGGCATCAGATACCATCAGCAGCTGTAAGTTTTATTGACACTGATGATGAAACCCATTCTAATGGATCAAGA ACTTCCTCTACAGATTTCCATGATCGAAGTAAGGGCATAATATTGGATAAACCAATTGCTGGGACCTCTCCGGATCAAATTTCGGATGTGGAGAAAGTTT TACCAGATCAGGAAATGAATTTATCTTCATATGAGGAGAAAAATAGTATCCGAAGGCTTTCAAATGGTAGTGGAGATGTTAAGGAAGGTGACTCATACAA TTTCTACCAGGCTTGTGATGGTCAGCATGTAATTCTTCATACATTGAACATGAAAGTTTTACTTCACCATTATGGGAGCTATGATAAGCTTCCACACAGA ATAAGTGGAAGGATTCTGCAATTGGAGGCAGTTACTCAGTCCGAGGCCATGAGGAGGCGATATCGATTCATAAGCCATTTTCCGTTAACAACAACATTTC AGCTTTGTGAAATTGATTTGAGTGATATACTGCCTCCTGAAGCACTGGCCCCATTTATGGATGAAATAAAGAAGCGTGCAAATCAGAGGAAGCAGCTTGC AAAGAAGGAACTAAAGGAAAAAATCAAGGCTGAAGCTGCTTCTACTTATTCTGTTACCATACCAACAAGTTATCAGTTTGCTTCTCGTGATAATCCTCCT GTGTTCTCGATGGATGACTTTGGAGCTTTGGGAAATTCCGCTACGTCATCAAGTCCTCCAGTTGTCGGGGAGAGAAAATTGTTCTCAAATGTTACAAGGC TTGGCTTTGCTGCTGCTCATGATTCTCCTTCCCTTCAAATTCAAGAGACTGGAGGATCACATGATAACAATACAACCACTGGGTCTTCTAGTGCAACAGG TTTGAGAAATGTGGAGGCACCATCATATTCCAATGTTACATCCAGAGCAGAATCTAATATAAGCTTGAATGCACCGAAGACAAACGACGCAGGGAAGAGG GGAAAGAAACCAAATCGAGTTCTTCTCTCAACAGCTGGTGGCAGGCGCTATTGAAGACTCGGTCACAGTCTCTTGGTAAGATGACTCCCAACCTCACCCC ACCCTATACCAAGCCAAATAAACAATTCCTACCTCTTTGAAGTGATTTCAGTGTGTAGTAATCAACCTTTAATAGATGATATGTGTGTACTTCATGCTCC TCTTATTAACAGGCAGACATGTGAAGAGAGAATAAATGTTTAAGTATACACAATCTCTGTCAATCCATGACAATTTAGGTTCAGTTGAATATTTACGTGG GTTTGTTGTTGACTACTTATTACGGTATGAGTAGAAATGAGTCGAGTCGAGTCAGACACTTGAAGTTCATACTTATCCATGCATGAGAAGATTAGGTAAA TGAGTCGAGTCGAGTCAGACACTTGAAGTTCATACTTA
• Tissue: pods
• Gene name: LI_gene_179718;
• Additional information: details;

Expression of Ll_transcript_378233

FPKM

• PAB: 26
• PNAB: 23.9
• PS1: 19.7
• PS2: 11.6
• PS3: 13.3
• PW1: 17.6
• PW2: 16
• PW3: 13.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378233

• Blastp: RING finger protein 10 from Xenopus with 30.67% of identity
• Blastx: RING finger protein 10 from Xenopus with 29.96% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (734904)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447408.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF00097.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;