Ll_transcript_378237

• Id Trinity: TRINITY_DN50763_c3_g1_i3
• Name Transcript: Ll_transcript_378237
• Sequence: GATAAAAATAAAAATGGTGGATCATCTTCTGGAATAATTTTTAAGGACAATAGTTCTGCTGGCGCGGTTGATCTTTCCAGGTCTGGAGAGACATTGAAAG GTGAGAAAAAATGGAAAAATGTATTTGCTAGTAAGTCAGGTTCTCCAGGTACTCTTAATTCAAATTCTAATGGTAATACTGGGAAAAAAGATCATAACTT GCTAAAAGCCAAAACAGGTCTTGAGGTAAAAAAAGAGTTGCAGGAGATATTGGATGATTCTGAGGAGGCTGATGCCAAAAATTATAGTAAGCAAAAGAAG GCCCAATTTCATGCAAAGCATAATCCTGTAGCAAATGAACCTTTACATTCTACCAAGAAGTTGAAGCGTGTGGATTCCAAAGATGATAAAACTTTTGGAT CTCTCCCAAAAGATGTCAAAAGTGCTTCTCTTGGCCCTACTGTTGTCCAAGCCAAAGCATTTAAAAACTTCAAGTTGGAAAGGTCCACATCACATTTTAA AACAGAAAAAAGCAAGACATCAAGGGGTCAATTTGGGGTTGCACAGTCTGATAATTCTGTCCTCGAGGTTCTACCAGGGGCCAAATTTCATAGCCAAGTC CATCAAGCTATGCCTGATTCTGCTAGAGTTGCTTCCGATGAAAGAGCAGGAAAGAGTTCTCTTAGACTGAAAGGTGATGCAAATAATGTTAATGTAAAAC AAGAAAAGAGGAAACGCAAAGCTGTTTGCCTTGTCAATGATGACGATGATGATGAACCTAAAACTCCTGTTCATGGAGGAGCAGCAAAAAATATTAAGTC ATCATTTGTCTCAGATGTCAAGAAGAGCAACAATGCACACTCAGAGAAGTCTAATGTTGCTCAGTTGGGCCCTACAAATTCTAGTGAACTTGAGGATATC CATTTGAAAGAACCATCTTCTAAATCACATGATGACACACCGTCAACTAGGCAGCCTCTAAAAGAGAAAGGCCGTACAGTTCCTCTAAACGTACCTCACA GTCCTGATAAATTAGATTCAAAGCAGTTTCCTTCCAAGGTGGCAAAATTAAGCTTTGCCTCTCCTGCAAAATCACCTCAAACAATTCCTCCGGCAAAGTC AAATGCTGAGCGGCATAAATTGTCCAAACCGTTGCTTAAAGTTTCCAGTAATGCTACTGAGAGAAAAGTTGATCACGAGCCTACAAAATCTGTACGTAGT GTCACTTCTCCTCAGAGTCAAGTTGCAATACATAACAAGAAGCTTGCATCTTCAACAGATATTTCTAAAATTACCCCAAAAACTTCAGCACAGGCAGTTG AAGTTCCTTCTTCAACAGTCGGTTTCAAGGAGACTGATGCTTTTCATGTTGATAGATTGGAGGCGAGCATAGAAGAAAAAAGTAGTGTATATGCTGGTTC TAGGACTCCAGAAAGTGCTAAAACTATGAAGCATCTTATTGCGGTGGCCCAGGCAAAAAGGAAAGTAGCCCATTCTCAATGTCTTCCCCATGACATTCAC AGTGTTCAGGCGGGGACACCTAGCCCCCATACAGTTCAGCCAGTTCGGGCCGTCTCAAGCAATTTTGTACAGGCAGATGTGCAGGGAGTTCATGAGCACC CATCATTGGCTTCTCCATATACTAACAATAATCAATCCACTTCTAGAAATCAAGATGCTGAAGATATTGAAGAGAGAAGAGTTGGTTCGGTACAAAGGGG TCTGGGAGGCTCGCTCAGTGGTGGTACTGAGGCTGCTGTTGCCCGTGATGCTTTTGAAGGAATGATTGAAACTTTATCAAGGACCAAGGAAAGTATTGGG CGCGCAACTCGTCTTGCCATTGATTGCACTAAGTATGGGATTGCCAATGAGGTTGTTGAACTTCTTATTCGAAAGCTGGAAAATGAAACTAGTTTTCATC GCAAAGTTGATTTGTTCTTTCTTGTTGATTCCATCACCCAATGCTCACATAGTCAAAAAGGCATTGCAGGAGCCTCCTACATCCCTATAGTTCAAGCAGC CTTGCCACGTCTTCTTGGTGCTGCTGCTCCCCCTGGGGCTAGTGCTCGGGAAAATCGTCGTCAGTGTCTCAAGGTTTTGAGACTGTGGCTTGAGAGGAAA ATTTTGCCTGAATCAGTTCTTCGCCGTTACATGGATGATATTGGAGTTTCAAATGATGAAACGACAGTTAGCCTTTCTTTCAGGCGCCCTTCTCGAGCAG AGCGAGCTGTGGATGACCCAATCAGAGAAATGGAAGGCATGCTTGTTGATGAGTATGGAAGTAATGCTACATTTCAGCTGCCTGGCTTCTTTTGTCATGC GTTTGAAGAAGATGAAGATGAAGATGAATTACCAGTCAATTCATGTAAGGATACATATGGCGC
• Tissue: pods
• Gene name: LI_gene_179720;
• Additional information: details;

Expression of Ll_transcript_378237

FPKM

• PAB: 2.4
• PNAB: 3.4
• PS1: 4.7
• PS2: 3.1
• PS3: 4.2
• PW1: 3.1
• PW2: 3.5
• PW3: 3.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378237

• Blastp: ENHANCER OF AG-4 protein 2 from Arabidopsis with 47.99% of identity
• Blastx: ENHANCER OF AG-4 protein 2 from Arabidopsis with 47.99% of identity
• Eggnog: RPR(ENOG410ZJEY)
• Kegg: Link to kegg annotations (AT5G23150)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450918.1)
• Pfam: RNA polymerase II-binding domain. (PF04818.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;