Id Trinity | TRINITY_DN50768_c1_g1_i1 |
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Name Transcript | Ll_transcript_378677 |
Sequence | CCGGATTCTTCTGTCCTTACTCGTCAAGGTATGAGATCTGCTGTTTCTATGAATTCTCTTGGCAGAAGTATTTGTTGTTCAAGTGTAGCCTAATATGTTT TAGGTGATTTAACAGCATCATCTAAAGTAAGCGAAGACCCTTTACCAACGAATGGATTCCCAAGGGTCTTGCAAGGTCAAGAGTTCTCGACCTTGAGAGG CAATTTTGCAGAAAGCAACAAGTCTGATACTGCTGTGAGGTCTGTTGCTTGGCCACCAGTAGAAGATAAAAAGATTGATGTTTCTACATCAAGAAAGTAT GGGTCAGAGAACTGGATGTCAATGGGGAGGCATGAACCAACCTATTCAGATCTTCTGTCAGGCTTTGGCGCTGGTGGAGATCCTTCCCATCCATCCTTGG TTTATCAAACGGGCCATGCAGCTTATCCCGAAAGAATGCATTCTTTGAATCATGAAGCCAAACTTCGTGTACATCATCCATGGTCTGTAATGCCCTGTAG TCTATCACTAAAGCTCGTGGACTCTAATCTGAAAGAGTCTGCTAATGTTGATACAGCTTACCAAGTTCGAGGGAATTTGAGCTATAGTGCATATGGTCAA TACCCCATGTTTTCCCATGGTCACAAAGTTGAGCATCTGCATGGAAACTTAATGCTACCCCTACCTTCAACTCAATATGAGAGTTCTCGTTCAAGGGAGC TTATGTCTACGCCAATGTCTATGAAAACTAGTGAGGCTATGACACTTAAAGATGGTGACTGTAAGCTATTTGGCATTTCACTTAGAAGCAGCCATGATGC ACAA BLAST |
Tissue | pods |
Gene name | LI_gene_179751; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_378677
Blastp | Auxin response factor 2A from Lycopersicon with 37.35% of identity |
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Blastx | Auxin response factor 2B from Lycopersicon with 38.24% of identity |
Eggnog | auxin response factor(ENOG4110RNJ) |
Kegg | Link to kegg annotations (778240) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430107.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |