Id Trinity | TRINITY_DN50768_c3_g2_i2 |
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Name Transcript | Ll_transcript_378697 |
Sequence | AGAGCAAGTCATGCAGATTTTGTTGTGCCATATCAAAAATATGTCAAAAGCATCAGAAAACCAGTGACCATTGGGACAAGATTCAAAATGAAATTTCATA TGGATGAATCTCCAGAGAGAAGGTCAACAAATAAAACATCATTTATAAATCATTATCCACACATCTTCTATGTGCTGAAAATGTGGTGAGAAATTTGATG TCATGTTCCTATATTGCAGGTTTAGTGGTGTAGTGACTGGAATGAGTGATTTGGATCCCTATAAGTGGCCTAAATCAAAATGGAGGTGTTTGATGGTACA TAATTAATTTTGCAGCATGTTTTGGCCATATTATGATCCATTTAGCATTTATTCTTGTTTTTCATCTTCACCAACTTTGCCATTGAAGCATATGCTTTAC CAACCTTATTTTATTAATAACATAGAAGTTAGACTTGGGAGTAAAATTAACAGCATCAAACTGAAACATGGTAAAGCCACTTTATTTGGAACCAGTATTT TTGACTATGATATCCAACAGATAAGAAGGGATGAGGATATTGGAGCAAATCATCAAAATCAAGTATCTCCTTGGGAGATTGATCATTCGGCTTCTTTCGC TCCTTTGAGCGTTCAATCTTCCTCAAGGCTGAAGAAATTGTGGACAGGTCTGCAGGATGCCTCACACAGTCACCTAGTCACCGGTATCAGTCGGAATGCT GAGAAAGCTAAAGTAGGAGGCAATGGGTTTTCGGATATGGAAGAGTATATAAGATCACCCGAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTATGTCAC TACATTATGGATGTGACACAGTAACTAAGCAGCCAGGTTTGGAGACCAGTTCTCCAAGTCATATAAGTGTCGCATCAACCGGAGTAAGAAAGGTTAATGC TGCTGAGTTTATGAGGATTCATCCTTCAAGTTATGCAGGTTTCACAGAAGCCAATAGGTTTCCAAGGGTTTTGCAAGGTCAAGAAATAGGTCCCTTGAGA CCCTTCACAGGAAAAGTTGATTTGAATCTTGGTGCTTGGGGCAAACCGAATATCGATTACACAACTTACAACCTGCATCAAACAACCAAGTCCAACTTTC ATTCTTTGGGACCAGAAGTTCTTCAAACTGCATATTTTCCTTATGGTGATATGCACAAAGCTAGCCAAGGCAGCAGCATATTCTGCTGTAATCCAACCAG TTTCCGAAGAGATCACGGCCCATTTAATACTCCTTCCACTCAGTCAGGGGTCATGAGAAATGAACTTGGACTGCCAGAACTCGCTATCCCGAATGAGCAG AAGCTGCAGGACGATATTTCTGGTGCTGCTGTTGCTTCTTTAGGAGAAAACCTGAGGATTCAAAATCATGACAAATTCAAGGGGAAGGTAAATGCTTGTA AACTATTCGGATTTCCCTTGTGTGGGGAAACTACCACCGAAAATTTACAGAACTCTAGTAAACGAAGTTGCACCAAGGTGAGCGATGATTAGCGACCGAG TTATATTATGATAATATGCCTTTTTTCTGTTGCTTTTGACAATTTGCCAACCAATGTAGTAAGTAACATACACTGAATGAAGGTTCACAAGCAAGGCAGC TTAGTTGGAAGAGCCATTGATCTATCAAGACTGAGAAGCTACAATGACCTGCTGAGTGAACTAGAGAGACTCTTTAGCATGGAAGGTCTTCTTACAGATC CTAATAAGAGATGGAGAATCGTGTACACCAACCGCGAAAACGACATTATGGTTGTCGGCGATGACCCTTGGCATGAGTTCTGCAATATAGTATCCAAGAT TCATATATATAAACAAGAAGTGGAGAAGATGGCAATTGGGATGATCACTGATGACACCAAGAGTTGTTTGGAACAAACACCAATGATTGTGGATGCTTCA AAGTCATCCTCAGTGGGTCAGCCAAATTCCTCAACAACAGTAGTTTGAGTCTAGTTTCAGGGTTGTCATTAACATATAATATATAATCAAATACAATTTG TATCTGTTCATGCCAAGATTATTATCTGAGTTAGTAAGCACAGCAAAAATTCACCATAAATAAAGGGCACTATGTGATAAGCCATTAAGAGAACTTGT BLAST |
Tissue | pods |
Gene name | LI_gene_179758; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_378697
Blastp | Auxin response factor 4 from Arabidopsis with 32.41% of identity |
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Blastx | Auxin response factor 4 from Arabidopsis with 38.2% of identity |
Eggnog | auxin response factor(ENOG4111D9H) |
Kegg | Link to kegg annotations (AT5G60450) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_014498033.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |