| Id Trinity | TRINITY_DN50768_c3_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_378707 |
| Sequence | TGGCAAATGCTATATCTGCTAAAAGCATGTTTCATGTTTTCTACAGTCCAAGAGCAAGTCATGCAGATTTTGTTGTGCCATATCAAAAATATGTCAAAAG CATCAGAAAACCAGTGACCATTGGGACAAGATTCAAAATGAAATTTCATATGGATGAATCTCCAGAGAGAAGGTTTAGTGGTGTAGTGACTGGAATGAGT GATTTGGATCCCTATAAGTGGCCTAAATCAAAATGGAGGTGTTTGATGATAAGAAGGGATGAGGATATTGGAGCAAATCATCAAAATCAAGTATCTCCTT GGGAGATTGATCATTCGGCTTCTTTCGCTCCTTTGAGCGTTCAATCTTCCTCAAGGCTGAAGAAATTGTGGACAGGTCTGCAGGATGCCTCACACAGTCA CCTAGTCACCGGTATCAGTCGGAATGCTGAGAAAGCTAAAGTAGGAGGCAATGGGTTTTCGGATATGGAAGAGTATATAAGATCACCCGAGGTCTTGCAA GGTCAAGAAAATACAGGTTTTATGTCACTACATTATGGATGTGACACAGTAACTAAGCAGCCAGGTTTGGAGACCAGTTCTCCAAGTCATATAAGTGTCG CATCAACCGGAGTAAGAAAGGTTAATGCTGCTGAGTTTATGAGGATTCATCCTTCAAGTTATGCAGGTTTCACAGAAGCCAATAGGTTTCCAAGGGTTTT GCAAGGTCAAGAAATAGGTCCCTTGAGACCCTTCACAGGAAAAGTTGATTTGAATCTTGGTGCTTGGGGCAAACCGAATATCGATTACACAACTTACAAC CTGCATCAAACAACCAAGTCCAACTTTCATTCTTTGGGACCAGAAGTTCTTCAAACTGCATATTTTCCTTATGGTGATATGCACAAAGCTAGCCAAGGCA GCAGCATATTCTGCTGTAATCCAACCAGTTTCCGAAGAGATCACGGCCCATTTAATACTCCTTCCACTCAGTCAGGGGTCATGAGAAATGAACTTGGACT GCCAGAACTCGCTATCCCGAATGAGCAGAAGCTGCAGGACGATATTTCTGGTGCTGCTGTTGCTTCTTTAGGAGAAAACCTGAGGATTCAAAATCATGAC AAATTCAAGGGGAAGGTAAATGCTTGTAAACTATTCGGATTTCCCTTGTGTGGGGAAACTACCACCGAAAATTTACAGAACTCTAGTAAACGAAGTTGCA CCAAGGTGAGCGATGATTAGCGACCGAGTTATATTATGATAATATGCCTTTTTTCTGTTGCTTTTGACAATTTGCCAACCAATGTAGTAAGTAACATACA CTGAATGAAGGTTCACAAGCAAGGCAGCTTAGTTGGAAGAGCCATTGATCTATCAAGACTGAGAAGCTACAATGACCTGCTGAGTGAACTAGAGAGACTC TTTAGCATGGAAGGTCTTCTTACAGATCCTAATAAGAGATGGAGAATCGTGTACACCAACCGCGAAAACGACATTATGGTTGTCGGCGATGACCCTTGGC AGTAAGTGTCCAATATTCCTGAATTCTAGAATAGCTGACAAGAATGATGCCAAATAGACACACTTGTGCACACATCAGCTTGCATCTACATAATATTTTA TCATCCTATTATACTCAATCTAACTCATTTTTTGCACAGATATGCCTTTTTTCTGCTTTGCCACATTTTAGGAACATGTGAAACAATCATACTTCCATTC AACTTGTATGTAATATTTTGGGTGATGCATACTAAAAACTGCATTTTTTCTCTCCTTTGGTTGCAGTGAGTTCTGCAATATAGTATCCAAGATTCATATA TATAAACAAGAAGTGGAGAAGATGGCAATTGGGATGATCACTGATGACACCAAGAGTTGTTTGGAACAAACACCAATGATTGTGGATGCTTCAAAGTCAT CCTCAGTGGGTCAGCCAAATTCCTCAACAACAGTAGTTTGAGTCTAGTTTCAGGGTTGTCATTAACATATAATATATAATCAAATACAATTTGTATCTGT TCATGCCAAGATTATTATCTGAGTTAGTAAGCACAGCAAAAATTCACCATAAATAAAGGGCACTATGTGATAAGCCATTAAGAGAACTTGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_179758; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_378707
| Blastp | Auxin response factor 4 from Arabidopsis with 40.89% of identity |
|---|---|
| Blastx | Auxin response factor 4 from Arabidopsis with 42.44% of identity |
| Eggnog | auxin response factor(ENOG4111D9H) |
| Kegg | Link to kegg annotations (AT5G60450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_014498033.1) |
| Pfam | Auxin response factor (PF06507.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |