Ll_transcript_378204

• Id Trinity: TRINITY_DN50769_c2_g2_i3
• Name Transcript: Ll_transcript_378204
• Sequence: CACAGAATAAACTAACTGCTATCTCTTCTTAAACTTCTATAATAAAAACTGTATCATTTTCGATCATCACAAACAACATTTCACATTACGCGCTTTCTCT CTCTCTCTCTCTCCAATTTCCTTCACTTCACTCTGTATTTTCATTCTCCCAGCCTTCAACAATGTTTATGGTGAAGAAGCTAGTGGAGAAAGCTTCCGTA AAGAAGCAACCTAGTGGAAATTCACCAGATGGGTTAAAAGCTACTGATATAAATCCACGCCTGGTTTTTCATCAAGGGGTACCATCACGTGGTTCCAAGT TTGCCTATGACAACATTCACAAAATACTGGCTCTTTCTACCAAGGATGGACGTATTAAACTATTTGGAAAAGATAATACACAAGCACTACTTGAATCTAG TGAGCCTAGCAAGTTTTTACAGTTCATCCAGAACCAAGGAGTCCTTATAAATGTCACTTTCAATAACCACATTGAGGTGTGGGACATAGATAAGAAGCTG TTGTCTGATACGTATGTTGTTAAACAAGATATCACTTCCTTTGCAGTCATTGAACAGACCCTATATATGTATGTTGGAGTTTCTAATGGTAATATTTCAG TTCTGAAGCTTGATCAAGAACCATGGCATATAGGACAGATGAAATACACCATACCACTCTCAGCTTCTTATGGGAATTCAACTGAAGTGTCTGACAACAA TACTGCTGTGACACACATACTTCCTCAACCAGCAGCTGAAAGTAAGAGAGCTCTCATCATCTTTAGAAATGGCCAAATTGTATTATGGGATGTTCGAGAA AGCAAATCAATTTTCAGAACTGGTGGAAATATATTGCAGCCACTGCATAATGAAACAAAGGTGTCTTCTGCATGTTGGGTGTGTCCTTTTGGAACTAAAG TGGTTGTAGGGTACAGCAATGGAGAGCTCTTCATTTGGGGCATTCCTTCTTTAAACACAGGGCATGGTTCAACACCTGATTATAGTATCCAGAGCACTCC TATATTAAAACTTAACTTAGGATATAAAACAGACAAAACTTCCATAGGATCAGTAAAATGGAATTATGCTGAAGGAAAGGCTAGTCGGCTATATGTCATG GGAGCGTCTGATAACGCATCTTCAAACTTGACACAGGTAGTTTTGTTGAATGAACACAACGAATCACGTACAGTTAAGTTGGGACTTCATTTGTCTGAAA GTTGTATTGACATGGAGATCATTTCAGCCTCAAGTGAGCAAAGCAAGAATAAACAAAATTCTGTTTTCCTTTTGCTTGGGAAATCAGGCCATTTATATAT GTATGATGATAGTTTGATTGAAAGGTATCTACTGCAGTTGCAGTCTAAGTCCACAGCCTCACCACCGAAGGAAGTGGTTGTGAAGTTACCACTGATAGAT TCAAGCATCACAACAACAAAATTCATATCCAACAATTCAAGCTTTTTAAATTCTGGAGAACAGTATTACAGCCAGCTGATGGAAACTTATCCACCGCTTA TTCCCATTGACACAAGTCTCAAAGTTGGGTTTAACCTCAGTTCTGCCAACTTTGCTGGATTTTCAAATGTTAAAAACTTGTACATAACTGGACATGGCAA TGGAGCCATAACTTTTTGGGATGCATCATGTCCCATTTTCACCCCAGTTTTACAATTAAAGCAACAGAGTGAAAATGATTTTTCTTTAAGTGGTATACCC TTGACGGCATTATATTTTGATATCAACTCTCCTCTCCTTGTTTCTGGTGACCAAAGTGGAATGGTTCGCATCTTCAAGTTCAAACCAGAACCATATGCCT CCAGCTTCTTGTCACTTGCTGGAGTTACAAAGAAAGGGCCAGATCATATAGTCCAAAGTGTTAAACTTATAAAGACTAGTGGTGCTGTGATTTGTATGAA CATAGATCCCCTCTCAGGGCATCTTGCTGTTGGTTCTGAACAAGGAAATGTTTCAGTTATTGACATAGATGGCCCGTCTCTGTTATATCAGAAACATATC ACGAGTCAAATTTCTACCGGTATCATCTCTCTGCGGTTCATAACCTGCAGATTGAATGGTTTTGATAAAAACATTTTAGCAGTTGGGACAAAGGATTCAT CCATTCTGGCACTAGATAACGAAACTGGAAACACACTTAGCACTGAAACTGTTCATCCTATGAAGCCCTCCAAAGCTCTCTTCATGCAAGTATTGGATGG ACAAGGTGAACCAATCACACGATCAGTTACAAAAGATAGCTTAGACTTAAGAGAAGGGAATCATATTGAGGATGCAAGAACAAAGCAACTGTACGTTTTG CAGTGTTCTGAGAAGGCTCTGTATATCTATTCTTTAGTGCATGTTGTACAGGGAGTCAAGAAGGTGCTTCATAAAAAGAAGTTTAATTCCTCTTCCTGTT GTTGGGCATCAACATTTTATACCCCCTCTAATATTGGCCTCATACTACTTTTCACCAGTGGAAAAGTAGAATTAAGGTGGTGGTCTTTTCATAAGTCTGC ATATATGTAACGTAGGAGAGATTGACCAAAGTGTTTAGAATATAATTTGATGTATCCAAAGTTCTTAATAGTACCCCACCATGTCGATTTTAGGATGCAC TCTTTATTATTATCATCACAACAACATCACTATTTTACCAATTTAACATACACACATGTGCTTCCAATGTTAGGTCTTTACCAGAATTATCTCTGATAGC GGAGACTTCAATTAGAGGTTTCACTTACTCGCCTCCAAAGTTGAAGTCATTTTCTGAGAGCCAGATCTGTTGTTCATCTAGAGGAGATCTTGTTTTGTTG AATGGTGACCAGGAAATCTTTGTTGTCTCATTGTTGGTCCAGAGGAATACTTACAGGCTTTTGGACTCTATTAGCTCCGTCTACAAGAAAGACAGAAGGC TATCACAAGAAGAGCTTGTTCCTGGCCCGGTCATCATTCCTAAGGAAAAGAAAAAGGGTATATTCGGCTCCGTAATCAAAGATTTTACTGGCAGTAAAGA AAAGCATGTGCTTCTCGTGGAAAAAGAAGATGACAAAGAAAGTTTCGAGGAACTCTCGACAATCTTTTCCTATGCAAATTTTCCAAATGATGCTGACAAT GACGATATCTCGACTGTGGACGAAGATGAGCTTGAACTAAACATAGATGACATTGACCTAGAAGATCCTGTGGAAAAACATAAAGGACAAAGCATATTGG GGGCTCTCAATAAGAAGAATTTGGCTGGCACATTTCAGGCTATGAAAGGAAGAATGAAAGTGATGAAGGGCAACAACCAGAAAGCACCTGAGAAGGAAGA ACAACAAGAGGAGAAAGCTGGTTCACTCCACCAAATTAAGAAGAGATATGGATTTTCTTCTTCCTCCAATGAAATAGGCACTGCTAAACTGGTAGAAAGC AAGCTGCAGGATAACACTAGGAAATTGCAGGGCATCAACCTACGAGCTGCTGAGATGAGTGATAAAGCAAAATCATTTTCAACATTGGCCAAACAAGTGC TGAAAAGTACTGAGCGGGATAGAAGAAGTTCATAACACATTAACCAATTACAATTTGCATTTTTAAATTGTTTTTTTATCACATATATATTATTTTTAAT ATATTTTTATATGTCAGTTTGTTCACCACCATTTTGTATTTAATATATACTTTTTCAAGCTGGCAGCAATGCTGAGATGCTGCCTGATTGCTTTTGTTTT GGATTGATGTAATTTTCCTGTAATCATGTCATATAGATTGGATATATAGTTTTTTCCCTATCTTTTTACTTG
• Tissue: pods
• Gene name: LI_gene_179768;
• Additional information: details;

Expression of Ll_transcript_378204

FPKM

• PAB: 0.9
• PNAB: 0.6
• PS1: 0
• PS2: 0
• PS3: 0.1
• PW1: 0.3
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378204

• Blastp: Syntaxin-binding protein 5 from Homo with 25.64% of identity
• Blastx: Syntaxin-binding protein 5 from Homo with 25.64% of identity
• Eggnog: syntaxin binding protein(ENOG410XTER)
• Kegg: Link to kegg annotations (134957)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423912.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;